RNA–Protein interactions for RNA: ENST00000548356.1

C12orf49-204, Transcript of chromosome 12 open reading frame 49, humanhuman

TSL 2 BASIC

Gene C12orf49, Length 923 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C12orf49-204ENST00000548356 SETD1AO15047 1707 aaKnown RBP22.96■■□□□ 1.27
C12orf49-204ENST00000548356 BCANQ96GW7 911 aa22.96■■□□□ 1.27
C12orf49-204ENST00000548356 PLEKHG1Q9ULL1 1385 aa22.95■■□□□ 1.26
C12orf49-204ENST00000548356 ZFYVE9O95405 1425 aa22.94■■□□□ 1.26
C12orf49-204ENST00000548356 FGD6Q6ZV73 1430 aa22.93■■□□□ 1.26
C12orf49-204ENST00000548356 NCOA3Q9Y6Q9 1424 aa22.93■■□□□ 1.26
C12orf49-204ENST00000548356 COL16A1Q07092 1604 aaPredicted RBP22.93■■□□□ 1.26
C12orf49-204ENST00000548356 RPRD2Q5VT52 1461 aaKnown RBP22.92■■□□□ 1.26
C12orf49-204ENST00000548356 CHIC2Q9UKJ5 165 aa22.92■■□□□ 1.26
C12orf49-204ENST00000548356 CHD2O14647 1828 aaKnown RBP22.92■■□□□ 1.26
C12orf49-204ENST00000548356 SPATA31A6Q5VVP1 1343 aa22.91■■□□□ 1.26
C12orf49-204ENST00000548356 HDGFP51858 240 aaKnown RBP22.91■■□□□ 1.26
C12orf49-204ENST00000548356 RIMS2Q9UQ26 1411 aa22.89■■□□□ 1.25
C12orf49-204ENST00000548356 LOC105371045A0A1W2PR82 267 aa22.88■■□□□ 1.25
C12orf49-204ENST00000548356 PPP1R15AO75807 674 aaPredicted RBP22.88■■□□□ 1.25
C12orf49-204ENST00000548356 ZNF772Q68DY9 489 aaPredicted RBP22.88■■□□□ 1.25
C12orf49-204ENST00000548356 TBX22Q9Y458 520 aa22.88■■□□□ 1.25
C12orf49-204ENST00000548356 LRP6O75581 1613 aa22.88■■□□□ 1.25
C12orf49-204ENST00000548356 ADGRL2O95490 1459 aa22.86■■□□□ 1.25
C12orf49-204ENST00000548356 APLP2Q06481 763 aa22.85■■□□□ 1.25
C12orf49-204ENST00000548356 MEX3CQ5U5Q3 659 aaKnown RBP22.85■■□□□ 1.25
C12orf49-204ENST00000548356 UPF1Q92900 1129 aaKnown RBP eCLIP22.85■■□□□ 1.25
C12orf49-204ENST00000548356 AHDC1Q5TGY3 1603 aaPredicted RBP22.84■■□□□ 1.25
C12orf49-204ENST00000548356 CADPS2Q86UW7 1296 aa22.84■■□□□ 1.25
C12orf49-204ENST00000548356 TMEM131LA2VDJ0 1609 aa22.83■■□□□ 1.25
C12orf49-204ENST00000548356 ABCF1Q8NE71 845 aaKnown RBP eCLIP22.83■■□□□ 1.25
C12orf49-204ENST00000548356 GCC2Q8IWJ2 1684 aa22.82■■□□□ 1.24
C12orf49-204ENST00000548356 C14orf37Q86TY3 774 aa22.82■■□□□ 1.24
C12orf49-204ENST00000548356 C19orf44Q9H6X5 657 aa22.82■■□□□ 1.24
C12orf49-204ENST00000548356 MYO5BQ9ULV0 1848 aa22.82■■□□□ 1.24
C12orf49-204ENST00000548356 SHPRHQ149N8 1683 aa22.81■■□□□ 1.24
C12orf49-204ENST00000548356 PIK3R4Q99570 1358 aa22.81■■□□□ 1.24
C12orf49-204ENST00000548356 ANKRD50Q9ULJ7 1429 aa22.81■■□□□ 1.24
C12orf49-204ENST00000548356 ADAMTS13Q76LX8 1427 aa22.8■■□□□ 1.24
C12orf49-204ENST00000548356 DIP2AQ14689 1571 aa22.8■■□□□ 1.24
C12orf49-204ENST00000548356 ATF3P18847 181 aa22.79■■□□□ 1.24
C12orf49-204ENST00000548356 TRIM52Q96A61 297 aa22.79■■□□□ 1.24
C12orf49-204ENST00000548356 SIPA1L2Q9P2F8 1722 aaPredicted RBP22.79■■□□□ 1.24
C12orf49-204ENST00000548356 RXRBP28702 533 aa22.76■■□□□ 1.23
C12orf49-204ENST00000548356 CDK12Q9NYV4 1490 aaPredicted RBP22.75■■□□□ 1.23
C12orf49-204ENST00000548356 CHGAP10645 457 aaKnown RBP22.73■■□□□ 1.23
C12orf49-204ENST00000548356 BRINP3Q76B58 766 aa22.73■■□□□ 1.23
C12orf49-204ENST00000548356 NUTM2DQ5VT03 806 aaPredicted RBP22.71■■□□□ 1.23
C12orf49-204ENST00000548356 DCCP43146 1447 aa22.71■■□□□ 1.23
C12orf49-204ENST00000548356 TRPM2O94759 1503 aa22.71■■□□□ 1.23
C12orf49-204ENST00000548356 AMOTL2Q9Y2J4 779 aa22.7■■□□□ 1.22
C12orf49-204ENST00000548356 UNC13BO14795 1591 aa22.7■■□□□ 1.22
C12orf49-204ENST00000548356 PTPRUQ92729 1446 aa22.68■■□□□ 1.22
C12orf49-204ENST00000548356 SETD5Q9C0A6 1442 aa22.68■■□□□ 1.22
C12orf49-204ENST00000548356 NUTM2BA6NNL0 878 aaPredicted RBP22.68■■□□□ 1.22
C12orf49-204ENST00000548356 NUTM2EB1AL46 878 aaPredicted RBP22.68■■□□□ 1.22
C12orf49-204ENST00000548356 FAM50AQ14320 339 aaKnown RBP22.68■■□□□ 1.22
C12orf49-204ENST00000548356 NUTM2AQ8IVF1 878 aaPredicted RBP22.68■■□□□ 1.22
C12orf49-204ENST00000548356 E9PCH4 1651 aa22.67■■□□□ 1.22
C12orf49-204ENST00000548356 ASXL1Q8IXJ9 1541 aa22.67■■□□□ 1.22
C12orf49-204ENST00000548356 AFF2P51816 1311 aa22.66■■□□□ 1.22
C12orf49-204ENST00000548356 MST1RQ04912 1400 aa22.63■■□□□ 1.21
C12orf49-204ENST00000548356 LRRC59Q96AG4 307 aaKnown RBP22.62■■□□□ 1.21
C12orf49-204ENST00000548356 NHSL1Q5SYE7 1610 aa22.61■■□□□ 1.21
C12orf49-204ENST00000548356 IQGAP3Q86VI3 1631 aa22.61■■□□□ 1.21
C12orf49-204ENST00000548356 XRN1Q8IZH2 1706 aaKnown RBP22.61■■□□□ 1.21
C12orf49-204ENST00000548356 SETBP1Q9Y6X0 1596 aa22.59■■□□□ 1.21
C12orf49-204ENST00000548356 RGS12O14924 1447 aa22.58■■□□□ 1.21
C12orf49-204ENST00000548356 NRXN3Q9Y4C0 1643 aa22.58■■□□□ 1.21
C12orf49-204ENST00000548356 RBM6P78332 1123 aaKnown RBP22.58■■□□□ 1.21
C12orf49-204ENST00000548356 ROCK1Q13464 1354 aa22.58■■□□□ 1.21
C12orf49-204ENST00000548356 QTRT2Q9H974 415 aaKnown RBP22.57■■□□□ 1.2
C12orf49-204ENST00000548356 PNPLA6Q8IY17 1366 aa22.56■■□□□ 1.2
C12orf49-204ENST00000548356 C8orf37Q96NL8 207 aa22.56■■□□□ 1.2
C12orf49-204ENST00000548356 NUP155O75694 1391 aa22.54■■□□□ 1.2
C12orf49-204ENST00000548356 ADGRL3Q9HAR2 1447 aa22.54■■□□□ 1.2
C12orf49-204ENST00000548356 SRCAPQ6ZRS2 3230 aa22.53■■□□□ 1.2
C12orf49-204ENST00000548356 METP08581 1390 aa22.52■■□□□ 1.2
C12orf49-204ENST00000548356 DDX17Q92841 729 aaKnown RBP22.5■■□□□ 1.19
C12orf49-204ENST00000548356 NGLY1Q96IV0 654 aa22.49■■□□□ 1.19
C12orf49-204ENST00000548356 ZNF326Q5BKZ1 582 aaKnown RBP22.47■■□□□ 1.19
C12orf49-204ENST00000548356 ATAD2Q6PL18 1390 aa22.47■■□□□ 1.19
C12orf49-204ENST00000548356 C1orf167Q5SNV9 1468 aa22.46■■□□□ 1.19
C12orf49-204ENST00000548356 LAMC1P11047 1609 aa22.46■■□□□ 1.19
C12orf49-204ENST00000548356 NALCNQ8IZF0 1738 aa22.45■■□□□ 1.19
C12orf49-204ENST00000548356 ADAMTS2O95450 1211 aa22.45■■□□□ 1.18
C12orf49-204ENST00000548356 SPHKAPQ2M3C7 1700 aa22.45■■□□□ 1.18
C12orf49-204ENST00000548356 SOS2Q07890 1332 aaPredicted RBP22.42■■□□□ 1.18
C12orf49-204ENST00000548356 TRPC5Q9UL62 973 aaPredicted RBP22.42■■□□□ 1.18
C12orf49-204ENST00000548356 NEXMIFQ5QGS0 1516 aa22.41■■□□□ 1.18
C12orf49-204ENST00000548356 FOXD1Q16676 465 aa22.41■■□□□ 1.18
C12orf49-204ENST00000548356 USP21Q9UK80 565 aa22.41■■□□□ 1.18
C12orf49-204ENST00000548356 PTCH1Q13635 1447 aa22.4■■□□□ 1.18
C12orf49-204ENST00000548356 FNBP4Q8N3X1 1017 aaPredicted RBP22.4■■□□□ 1.18
C12orf49-204ENST00000548356 ORAI2Q96SN7 254 aa22.37■■□□□ 1.17
C12orf49-204ENST00000548356 ATRNO75882 1429 aa22.37■■□□□ 1.17
C12orf49-204ENST00000548356 ZRANB1Q9UGI0 708 aa22.36■■□□□ 1.17
C12orf49-204ENST00000548356 PRAG1Q86YV5 1406 aa22.35■■□□□ 1.17
C12orf49-204ENST00000548356 CLTCL1P53675 1640 aa22.35■■□□□ 1.17
C12orf49-204ENST00000548356 COL22A1Q8NFW1 1626 aaPredicted RBP22.34■■□□□ 1.17
C12orf49-204ENST00000548356 ROBO2Q9HCK4 1378 aa22.34■■□□□ 1.17
C12orf49-204ENST00000548356 ITGAEP38570 1179 aa22.33■■□□□ 1.17
C12orf49-204ENST00000548356 CCDC125Q86Z20 511 aa22.33■■□□□ 1.17
C12orf49-204ENST00000548356 EP400Q96L91 3159 aa22.32■■□□□ 1.16
C12orf49-204ENST00000548356 MYOM2P54296 1465 aa22.3■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms