RNA–Protein interactions for RNA: ENST00000546710.2

LINC02404-201, Transcript of long intergenic non-protein coding RNA 2404, humanhuman

TSL 5 BASIC

Gene LINC02404, Length 1,188 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02404-201ENST00000546710 METTL3Q86U44 580 aaKnown RBP11.69□□□□□ -0.54
LINC02404-201ENST00000546710 NISCHQ9Y2I1 1504 aa11.68□□□□□ -0.54
LINC02404-201ENST00000546710 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.67□□□□□ -0.54
LINC02404-201ENST00000546710 SLC4A3P48751 1232 aa11.67□□□□□ -0.54
LINC02404-201ENST00000546710 APLP1P51693 650 aa11.67□□□□□ -0.54
LINC02404-201ENST00000546710 KCNC4Q03721 635 aa11.65□□□□□ -0.54
LINC02404-201ENST00000546710 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.65□□□□□ -0.54
LINC02404-201ENST00000546710 NECTIN2Q92692 538 aa11.65□□□□□ -0.54
LINC02404-201ENST00000546710 TJAP1Q5JTD0 557 aa11.62□□□□□ -0.55
LINC02404-201ENST00000546710 LMOD2Q6P5Q4 547 aa11.61□□□□□ -0.55
LINC02404-201ENST00000546710 NLRP7Q8WX94 980 aa11.61□□□□□ -0.55
LINC02404-201ENST00000546710 MTRQ99707 1265 aa11.61□□□□□ -0.55
LINC02404-201ENST00000546710 PHOX2BQ99453 314 aa11.6□□□□□ -0.55
LINC02404-201ENST00000546710 MAP2K5Q13163 448 aa11.59□□□□□ -0.55
LINC02404-201ENST00000546710 SLC10A3P09131 477 aa11.58□□□□□ -0.56
LINC02404-201ENST00000546710 IL21Q9HBE4 155 aa11.57□□□□□ -0.56
LINC02404-201ENST00000546710 CFHP08603 1231 aa11.56□□□□□ -0.56
LINC02404-201ENST00000546710 COPS2P61201 443 aa11.56□□□□□ -0.56
LINC02404-201ENST00000546710 ZNF516Q92618 1163 aa11.56□□□□□ -0.56
LINC02404-201ENST00000546710 PRR14Q9BWN1 585 aa11.56□□□□□ -0.56
LINC02404-201ENST00000546710 DAXXQ9UER7 740 aaPredicted RBP11.56□□□□□ -0.56
LINC02404-201ENST00000546710 IRF6O14896 467 aa11.55□□□□□ -0.56
LINC02404-201ENST00000546710 KMT5BQ4FZB7 885 aa11.54□□□□□ -0.56
LINC02404-201ENST00000546710 PCDHB3Q9Y5E6 796 aa11.53□□□□□ -0.56
LINC02404-201ENST00000546710 MINK1Q8N4C8 1332 aaPredicted RBP11.53□□□□□ -0.56
LINC02404-201ENST00000546710 ACTN4O43707 911 aaKnown RBP11.52□□□□□ -0.57
LINC02404-201ENST00000546710 DDX11L8A8MPP1 907 aa11.51□□□□□ -0.57
LINC02404-201ENST00000546710 BLOC1S3Q6QNY0 202 aa11.51□□□□□ -0.57
LINC02404-201ENST00000546710 CCDC102AQ96A19 550 aa11.51□□□□□ -0.57
LINC02404-201ENST00000546710 RSPH4AQ5TD94 716 aa11.5□□□□□ -0.57
LINC02404-201ENST00000546710 Q6ZNB5 142 aa11.5□□□□□ -0.57
LINC02404-201ENST00000546710 RDH13Q8NBN7 331 aa11.5□□□□□ -0.57
LINC02404-201ENST00000546710 NKX2-3Q8TAU0 364 aa11.49□□□□□ -0.57
LINC02404-201ENST00000546710 SLC24A1O60721 1099 aa11.48□□□□□ -0.57
LINC02404-201ENST00000546710 ZC3H15Q8WU90 426 aaKnown RBP11.48□□□□□ -0.57
LINC02404-201ENST00000546710 ZPR1O75312 459 aa11.47□□□□□ -0.57
LINC02404-201ENST00000546710 ZMYND10O75800 440 aa11.46□□□□□ -0.57
LINC02404-201ENST00000546710 SULF1Q8IWU6 871 aa11.46□□□□□ -0.57
LINC02404-201ENST00000546710 MDM2Q00987 491 aaPredicted RBP11.45□□□□□ -0.58
LINC02404-201ENST00000546710 BARGINQ6ZT62 677 aa11.44□□□□□ -0.58
LINC02404-201ENST00000546710 KRI1Q8N9T8 703 aaKnown RBP11.44□□□□□ -0.58
LINC02404-201ENST00000546710 PUS10Q3MIT2 529 aaKnown RBP11.43□□□□□ -0.58
LINC02404-201ENST00000546710 PPP1R18Q6NYC8 613 aa11.43□□□□□ -0.58
LINC02404-201ENST00000546710 TLL1O43897 1013 aa11.42□□□□□ -0.58
LINC02404-201ENST00000546710 GCGRP47871 477 aa11.41□□□□□ -0.58
LINC02404-201ENST00000546710 LAPTM4AQ15012 233 aa11.41□□□□□ -0.58
LINC02404-201ENST00000546710 FUT2Q10981 343 aa11.4□□□□□ -0.58
LINC02404-201ENST00000546710 NR1I2O75469 434 aa11.39□□□□□ -0.59
LINC02404-201ENST00000546710 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.39□□□□□ -0.59
LINC02404-201ENST00000546710 CD46P15529 392 aa11.38□□□□□ -0.59
LINC02404-201ENST00000546710 SCUBE3Q8IX30 993 aa11.38□□□□□ -0.59
LINC02404-201ENST00000546710 CLCN1P35523 988 aa11.37□□□□□ -0.59
LINC02404-201ENST00000546710 GPCPD1Q9NPB8 672 aa11.37□□□□□ -0.59
LINC02404-201ENST00000546710 ATP6V1AP38606 617 aa11.36□□□□□ -0.59
LINC02404-201ENST00000546710 MORN1Q5T089 497 aa11.36□□□□□ -0.59
LINC02404-201ENST00000546710 GGCXP38435 758 aa11.35□□□□□ -0.59
LINC02404-201ENST00000546710 TMUB1Q9BVT8 246 aa11.35□□□□□ -0.59
LINC02404-201ENST00000546710 ADH1BP00325 375 aa11.34□□□□□ -0.59
LINC02404-201ENST00000546710 REPIN1Q9BWE0 567 aaKnown RBP11.34□□□□□ -0.59
LINC02404-201ENST00000546710 FAM217BQ9NTX9 383 aaPredicted RBP11.34□□□□□ -0.59
LINC02404-201ENST00000546710 S1PR4O95977 384 aa11.32□□□□□ -0.6
LINC02404-201ENST00000546710 PRKD2Q9BZL6 878 aa11.32□□□□□ -0.6
LINC02404-201ENST00000546710 SLC27A5Q9Y2P5 690 aa11.32□□□□□ -0.6
LINC02404-201ENST00000546710 RNF223E7ERA6 249 aa11.31□□□□□ -0.6
LINC02404-201ENST00000546710 KDM4AO75164 1064 aa11.3□□□□□ -0.6
LINC02404-201ENST00000546710 TTLL12Q14166 644 aaPredicted RBP11.3□□□□□ -0.6
LINC02404-201ENST00000546710 AMHR2Q16671 573 aa11.3□□□□□ -0.6
LINC02404-201ENST00000546710 BCANQ96GW7 911 aa11.3□□□□□ -0.6
LINC02404-201ENST00000546710 SPSB2Q99619 263 aa11.3□□□□□ -0.6
LINC02404-201ENST00000546710 PPEF1O14829 653 aaPredicted RBP11.29□□□□□ -0.6
LINC02404-201ENST00000546710 GFRA3O60609 400 aa11.29□□□□□ -0.6
LINC02404-201ENST00000546710 GRIPAP1Q4V328 841 aa11.29□□□□□ -0.6
LINC02404-201ENST00000546710 THAP11Q96EK4 314 aa11.29□□□□□ -0.6
LINC02404-201ENST00000546710 TRAF7Q6Q0C0 670 aa11.28□□□□□ -0.6
LINC02404-201ENST00000546710 SLC6A16Q9GZN6 736 aa11.28□□□□□ -0.6
LINC02404-201ENST00000546710 TRIM66O15016 1216 aa11.27□□□□□ -0.61
LINC02404-201ENST00000546710 FMNL1O95466 1100 aaPredicted RBP11.26□□□□□ -0.61
LINC02404-201ENST00000546710 SSTR3P32745 418 aaPredicted RBP11.26□□□□□ -0.61
LINC02404-201ENST00000546710 HLA-CQ95604 372 aa11.26□□□□□ -0.61
LINC02404-201ENST00000546710 AK7Q96M32 723 aa11.26□□□□□ -0.61
LINC02404-201ENST00000546710 RNF19BQ6ZMZ0 732 aa11.25□□□□□ -0.61
LINC02404-201ENST00000546710 V9GY48 417 aaPredicted RBP11.25□□□□□ -0.61
LINC02404-201ENST00000546710 USP46P62068 366 aa11.24□□□□□ -0.61
LINC02404-201ENST00000546710 BRICD5Q6PL45 260 aa11.24□□□□□ -0.61
LINC02404-201ENST00000546710 GIGYF2Q6Y7W6 1299 aaKnown RBP11.24□□□□□ -0.61
LINC02404-201ENST00000546710 ANKLE1Q8NAG6 615 aa11.24□□□□□ -0.61
LINC02404-201ENST00000546710 SLC24A3Q9HC58 644 aa11.24□□□□□ -0.61
LINC02404-201ENST00000546710 SALL2Q9Y467 1007 aaPredicted RBP11.24□□□□□ -0.61
LINC02404-201ENST00000546710 HOXA2O43364 376 aa11.23□□□□□ -0.61
LINC02404-201ENST00000546710 PARP9Q8IXQ6 854 aa11.23□□□□□ -0.61
LINC02404-201ENST00000546710 FAM160A2Q8N612 972 aaPredicted RBP11.23□□□□□ -0.61
LINC02404-201ENST00000546710 NUTM1Q86Y26 1132 aa11.22□□□□□ -0.61
LINC02404-201ENST00000546710 EMID1Q96A84 441 aaPredicted RBP11.22□□□□□ -0.61
LINC02404-201ENST00000546710 GUCA2AQ02747 115 aa11.21□□□□□ -0.61
LINC02404-201ENST00000546710 PRDM9Q9NQV7 894 aa11.21□□□□□ -0.61
LINC02404-201ENST00000546710 NRG2O14511 850 aaPredicted RBP11.2□□□□□ -0.62
LINC02404-201ENST00000546710 SLC19A1P41440 591 aa11.2□□□□□ -0.62
LINC02404-201ENST00000546710 Q3C1V9 767 aa11.2□□□□□ -0.62
LINC02404-201ENST00000546710 PLA2G2CQ5R387 149 aa11.19□□□□□ -0.62
LINC02404-201ENST00000546710 LCE2BO14633 110 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms