RNA–Protein interactions for RNA: ENST00000546271.1

UBC-214, Transcript of ubiquitin C, humanhuman

TSL 4

Gene UBC, Length 559 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBC-214ENST00000546271 TOM1O60784 492 aa18.03■□□□□ 0.48
UBC-214ENST00000546271 SENP3Q9H4L4 574 aaPredicted RBP18.02■□□□□ 0.48
UBC-214ENST00000546271 NWD1Q149M9 1564 aa18.01■□□□□ 0.47
UBC-214ENST00000546271 CHGAP10645 457 aaKnown RBP18.01■□□□□ 0.47
UBC-214ENST00000546271 BCANQ96GW7 911 aa18.01■□□□□ 0.47
UBC-214ENST00000546271 RIMS2Q9UQ26 1411 aa18■□□□□ 0.47
UBC-214ENST00000546271 ZFYVE9O95405 1425 aa17.99■□□□□ 0.47
UBC-214ENST00000546271 TRIM52Q96A61 297 aa17.99■□□□□ 0.47
UBC-214ENST00000546271 PPP1R15AO75807 674 aaPredicted RBP17.98■□□□□ 0.47
UBC-214ENST00000546271 SLC26A8Q96RN1 970 aa17.98■□□□□ 0.47
UBC-214ENST00000546271 CHD2O14647 1828 aaKnown RBP17.98■□□□□ 0.47
UBC-214ENST00000546271 HSPA1LP34931 641 aa17.96■□□□□ 0.47
UBC-214ENST00000546271 KIF1BO60333 1816 aa17.95■□□□□ 0.46
UBC-214ENST00000546271 NKTRP30414 1462 aaKnown RBP17.95■□□□□ 0.46
UBC-214ENST00000546271 CLTCL1P53675 1640 aa17.95■□□□□ 0.46
UBC-214ENST00000546271 PLEKHG1Q9ULL1 1385 aa17.95■□□□□ 0.46
UBC-214ENST00000546271 HDGFP51858 240 aaKnown RBP17.95■□□□□ 0.46
UBC-214ENST00000546271 DIP2AQ14689 1571 aa17.95■□□□□ 0.46
UBC-214ENST00000546271 MED1Q15648 1581 aaPredicted RBP17.95■□□□□ 0.46
UBC-214ENST00000546271 SLC4A1APQ9BWU0 796 aaKnown RBP17.93■□□□□ 0.46
UBC-214ENST00000546271 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.92■□□□□ 0.46
UBC-214ENST00000546271 TRPM2O94759 1503 aa17.92■□□□□ 0.46
UBC-214ENST00000546271 TMEM94Q12767 1356 aa17.91■□□□□ 0.46
UBC-214ENST00000546271 NUTM2DQ5VT03 806 aaPredicted RBP17.91■□□□□ 0.46
UBC-214ENST00000546271 ROBO1Q9Y6N7 1651 aa17.9■□□□□ 0.46
UBC-214ENST00000546271 KCNA6P17658 529 aa17.89■□□□□ 0.45
UBC-214ENST00000546271 PROSER2Q86WR7 435 aaPredicted RBP17.89■□□□□ 0.45
UBC-214ENST00000546271 RBM33Q96EV2 1170 aaKnown RBP17.88■□□□□ 0.45
UBC-214ENST00000546271 NRXN3Q9Y4C0 1643 aa17.87■□□□□ 0.45
UBC-214ENST00000546271 SETD5Q9C0A6 1442 aa17.87■□□□□ 0.45
UBC-214ENST00000546271 ZNF326Q5BKZ1 582 aaKnown RBP17.85■□□□□ 0.45
UBC-214ENST00000546271 ILDR2Q71H61 639 aa17.85■□□□□ 0.45
UBC-214ENST00000546271 ADAMTS13Q76LX8 1427 aa17.85■□□□□ 0.45
UBC-214ENST00000546271 MPHOSPH9Q99550 1183 aa17.85■□□□□ 0.45
UBC-214ENST00000546271 TBX22Q9Y458 520 aa17.85■□□□□ 0.45
UBC-214ENST00000546271 SETBP1Q9Y6X0 1596 aa17.84■□□□□ 0.45
UBC-214ENST00000546271 NEXMIFQ5QGS0 1516 aa17.84■□□□□ 0.45
UBC-214ENST00000546271 MSH6P52701 1360 aa17.84■□□□□ 0.45
UBC-214ENST00000546271 ACIN1Q9UKV3 1341 aaKnown RBP17.84■□□□□ 0.45
UBC-214ENST00000546271 FOXD1Q16676 465 aa17.84■□□□□ 0.45
UBC-214ENST00000546271 XRN1Q8IZH2 1706 aaKnown RBP17.83■□□□□ 0.44
UBC-214ENST00000546271 PHLPP1O60346 1717 aa17.82■□□□□ 0.44
UBC-214ENST00000546271 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.82■□□□□ 0.44
UBC-214ENST00000546271 RAB3GAP2Q9H2M9 1393 aa17.81■□□□□ 0.44
UBC-214ENST00000546271 PPLO60437 1756 aa17.79■□□□□ 0.44
UBC-214ENST00000546271 C14orf37Q86TY3 774 aa17.79■□□□□ 0.44
UBC-214ENST00000546271 PIK3R4Q99570 1358 aa17.79■□□□□ 0.44
UBC-214ENST00000546271 FAM135BQ49AJ0 1406 aa17.77■□□□□ 0.44
UBC-214ENST00000546271 SETD1AO15047 1707 aaKnown RBP17.76■□□□□ 0.43
UBC-214ENST00000546271 CCDC144AA2RUR9 1427 aa17.76■□□□□ 0.43
UBC-214ENST00000546271 PTPRUQ92729 1446 aa17.76■□□□□ 0.43
UBC-214ENST00000546271 PHF23Q9BUL5 403 aaPredicted RBP17.76■□□□□ 0.43
UBC-214ENST00000546271 NALCNQ8IZF0 1738 aa17.75■□□□□ 0.43
UBC-214ENST00000546271 RPGRIP1LQ68CZ1 1315 aa17.74■□□□□ 0.43
UBC-214ENST00000546271 IFT172Q9UG01 1749 aa17.74■□□□□ 0.43
UBC-214ENST00000546271 VGFO15240 615 aaPredicted RBP17.73■□□□□ 0.43
UBC-214ENST00000546271 AMOTL2Q9Y2J4 779 aa17.73■□□□□ 0.43
UBC-214ENST00000546271 NCOA3Q9Y6Q9 1424 aa17.72■□□□□ 0.43
UBC-214ENST00000546271 COL16A1Q07092 1604 aaPredicted RBP17.72■□□□□ 0.43
UBC-214ENST00000546271 METP08581 1390 aa17.71■□□□□ 0.43
UBC-214ENST00000546271 HRCP23327 699 aa17.71■□□□□ 0.43
UBC-214ENST00000546271 SPATA31E1Q6ZUB1 1445 aa17.71■□□□□ 0.43
UBC-214ENST00000546271 SOCS7O14512 581 aa17.7■□□□□ 0.42
UBC-214ENST00000546271 RGL3Q3MIN7 710 aa17.69■□□□□ 0.42
UBC-214ENST00000546271 SLAIN2Q9P270 581 aa17.69■□□□□ 0.42
UBC-214ENST00000546271 ATF3P18847 181 aa17.68■□□□□ 0.42
UBC-214ENST00000546271 AHDC1Q5TGY3 1603 aaPredicted RBP17.67■□□□□ 0.42
UBC-214ENST00000546271 DCCP43146 1447 aa17.65■□□□□ 0.42
UBC-214ENST00000546271 SHPRHQ149N8 1683 aa17.65■□□□□ 0.42
UBC-214ENST00000546271 CADPS2Q86UW7 1296 aa17.65■□□□□ 0.42
UBC-214ENST00000546271 ADGRF5Q8IZF2 1346 aa17.65■□□□□ 0.42
UBC-214ENST00000546271 NHSL1Q5SYE7 1610 aa17.65■□□□□ 0.42
UBC-214ENST00000546271 ANKRD30BQ9BXX2 1392 aa17.65■□□□□ 0.42
UBC-214ENST00000546271 C19orf44Q9H6X5 657 aa17.64■□□□□ 0.41
UBC-214ENST00000546271 ADGRL3Q9HAR2 1447 aa17.64■□□□□ 0.41
UBC-214ENST00000546271 ASXL1Q8IXJ9 1541 aa17.63■□□□□ 0.41
UBC-214ENST00000546271 PTCH1Q13635 1447 aa17.61■□□□□ 0.41
UBC-214ENST00000546271 JCADQ9P266 1359 aa17.6■□□□□ 0.41
UBC-214ENST00000546271 MST1RQ04912 1400 aa17.6■□□□□ 0.41
UBC-214ENST00000546271 KNDC1Q76NI1 1749 aa17.6■□□□□ 0.41
UBC-214ENST00000546271 PRAG1Q86YV5 1406 aa17.58■□□□□ 0.41
UBC-214ENST00000546271 LAMC1P11047 1609 aa17.58■□□□□ 0.4
UBC-214ENST00000546271 PIK3C2GO75747 1445 aa17.57■□□□□ 0.4
UBC-214ENST00000546271 ROBO2Q9HCK4 1378 aa17.57■□□□□ 0.4
UBC-214ENST00000546271 BRINP3Q76B58 766 aa17.56■□□□□ 0.4
UBC-214ENST00000546271 MYOM2P54296 1465 aa17.56■□□□□ 0.4
UBC-214ENST00000546271 LRP6O75581 1613 aa17.55■□□□□ 0.4
UBC-214ENST00000546271 NRXN1Q9ULB1 1477 aa17.54■□□□□ 0.4
UBC-214ENST00000546271 CDC42BPGQ6DT37 1551 aa17.53■□□□□ 0.4
UBC-214ENST00000546271 TMEM132EQ6IEE7 984 aa17.52■□□□□ 0.4
UBC-214ENST00000546271 C14orf93Q9H972 538 aaKnown RBP17.52■□□□□ 0.4
UBC-214ENST00000546271 LRPPRCP42704 1394 aaKnown RBP17.52■□□□□ 0.39
UBC-214ENST00000546271 MEX3CQ5U5Q3 659 aaKnown RBP17.51■□□□□ 0.39
UBC-214ENST00000546271 STK26Q9P289 416 aa17.51■□□□□ 0.39
UBC-214ENST00000546271 RGS17Q9UGC6 210 aaPredicted RBP17.51■□□□□ 0.39
UBC-214ENST00000546271 C1orf167Q5SNV9 1468 aa17.5■□□□□ 0.39
UBC-214ENST00000546271 TECPR2O15040 1411 aa17.5■□□□□ 0.39
UBC-214ENST00000546271 CFAP70Q5T0N1 1121 aa17.5■□□□□ 0.39
UBC-214ENST00000546271 ABCC11Q96J66 1382 aa17.5■□□□□ 0.39
UBC-214ENST00000546271 SPATA31A6Q5VVP1 1343 aa17.49■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms