RNA–Protein interactions for RNA: ENST00000544738.5

DDX55-212, Transcript of DEAD-box helicase 55, humanhuman

TSL 5

Gene DDX55, Length 956 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-212ENST00000544738 RXRBP28702 533 aa25.08■■□□□ 1.61
DDX55-212ENST00000544738 C14orf37Q86TY3 774 aa25.08■■□□□ 1.61
DDX55-212ENST00000544738 SPATA31A6Q5VVP1 1343 aa25.08■■□□□ 1.6
DDX55-212ENST00000544738 ERBINQ96RT1 1412 aa25.07■■□□□ 1.6
DDX55-212ENST00000544738 NKTRP30414 1462 aaKnown RBP25.07■■□□□ 1.6
DDX55-212ENST00000544738 SRCAPQ6ZRS2 3230 aa25.06■■□□□ 1.6
DDX55-212ENST00000544738 ANKRD30AQ9BXX3 1397 aa25.05■■□□□ 1.6
DDX55-212ENST00000544738 LRP6O75581 1613 aa25.04■■□□□ 1.6
DDX55-212ENST00000544738 NUTM2BA6NNL0 878 aaPredicted RBP25.02■■□□□ 1.6
DDX55-212ENST00000544738 NUTM2EB1AL46 878 aaPredicted RBP25.02■■□□□ 1.6
DDX55-212ENST00000544738 PPP1R15AO75807 674 aaPredicted RBP25.02■■□□□ 1.6
DDX55-212ENST00000544738 NUTM2AQ8IVF1 878 aaPredicted RBP25.02■■□□□ 1.6
DDX55-212ENST00000544738 CHIC2Q9UKJ5 165 aa25.02■■□□□ 1.6
DDX55-212ENST00000544738 SLC52A1Q9NWF4 448 aa25.01■■□□□ 1.59
DDX55-212ENST00000544738 FAM50AQ14320 339 aaKnown RBP24.99■■□□□ 1.59
DDX55-212ENST00000544738 NWD1Q149M9 1564 aa24.99■■□□□ 1.59
DDX55-212ENST00000544738 COL16A1Q07092 1604 aaPredicted RBP24.98■■□□□ 1.59
DDX55-212ENST00000544738 ATF3P18847 181 aa24.98■■□□□ 1.59
DDX55-212ENST00000544738 HDGFP51858 240 aaKnown RBP24.98■■□□□ 1.59
DDX55-212ENST00000544738 CADPS2Q86UW7 1296 aa24.97■■□□□ 1.59
DDX55-212ENST00000544738 KDM5AP29375 1690 aaKnown RBP24.96■■□□□ 1.59
DDX55-212ENST00000544738 C19orf44Q9H6X5 657 aa24.94■■□□□ 1.58
DDX55-212ENST00000544738 TBX22Q9Y458 520 aa24.94■■□□□ 1.58
DDX55-212ENST00000544738 ADGRL2O95490 1459 aa24.94■■□□□ 1.58
DDX55-212ENST00000544738 NOS1P29475 1434 aa24.94■■□□□ 1.58
DDX55-212ENST00000544738 PLEKHG1Q9ULL1 1385 aa24.93■■□□□ 1.58
DDX55-212ENST00000544738 ADGRB3O60242 1522 aa24.93■■□□□ 1.58
DDX55-212ENST00000544738 AFF2P51816 1311 aa24.91■■□□□ 1.58
DDX55-212ENST00000544738 CHGAP10645 457 aaKnown RBP24.91■■□□□ 1.58
DDX55-212ENST00000544738 LMTK2Q8IWU2 1503 aa24.91■■□□□ 1.58
DDX55-212ENST00000544738 RIMS2Q9UQ26 1411 aa24.9■■□□□ 1.58
DDX55-212ENST00000544738 NCOA3Q9Y6Q9 1424 aa24.9■■□□□ 1.58
DDX55-212ENST00000544738 NUTM2DQ5VT03 806 aaPredicted RBP24.9■■□□□ 1.58
DDX55-212ENST00000544738 BRINP3Q76B58 766 aa24.88■■□□□ 1.57
DDX55-212ENST00000544738 CHD2O14647 1828 aaKnown RBP24.88■■□□□ 1.57
DDX55-212ENST00000544738 ZFYVE9O95405 1425 aa24.86■■□□□ 1.57
DDX55-212ENST00000544738 QTRT2Q9H974 415 aaKnown RBP24.86■■□□□ 1.57
DDX55-212ENST00000544738 ABCF1Q8NE71 845 aaKnown RBP eCLIP24.85■■□□□ 1.57
DDX55-212ENST00000544738 ANKRD50Q9ULJ7 1429 aa24.85■■□□□ 1.57
DDX55-212ENST00000544738 CDK12Q9NYV4 1490 aaPredicted RBP24.84■■□□□ 1.57
DDX55-212ENST00000544738 AHDC1Q5TGY3 1603 aaPredicted RBP24.84■■□□□ 1.57
DDX55-212ENST00000544738 C8orf37Q96NL8 207 aa24.83■■□□□ 1.57
DDX55-212ENST00000544738 SHPRHQ149N8 1683 aa24.82■■□□□ 1.56
DDX55-212ENST00000544738 RBM6P78332 1123 aaKnown RBP24.82■■□□□ 1.56
DDX55-212ENST00000544738 AMOTL2Q9Y2J4 779 aa24.81■■□□□ 1.56
DDX55-212ENST00000544738 SIPA1L2Q9P2F8 1722 aaPredicted RBP24.81■■□□□ 1.56
DDX55-212ENST00000544738 LRRC59Q96AG4 307 aaKnown RBP24.78■■□□□ 1.56
DDX55-212ENST00000544738 ROCK1Q13464 1354 aa24.78■■□□□ 1.56
DDX55-212ENST00000544738 ADAMTS13Q76LX8 1427 aa24.77■■□□□ 1.56
DDX55-212ENST00000544738 RGS12O14924 1447 aa24.76■■□□□ 1.55
DDX55-212ENST00000544738 PPARGC1BQ86YN6 1023 aaKnown RBP24.75■■□□□ 1.55
DDX55-212ENST00000544738 MYO5BQ9ULV0 1848 aa24.75■■□□□ 1.55
DDX55-212ENST00000544738 DDX17Q92841 729 aaKnown RBP24.74■■□□□ 1.55
DDX55-212ENST00000544738 NGLY1Q96IV0 654 aa24.74■■□□□ 1.55
DDX55-212ENST00000544738 PIK3R4Q99570 1358 aa24.74■■□□□ 1.55
DDX55-212ENST00000544738 DIP2AQ14689 1571 aa24.74■■□□□ 1.55
DDX55-212ENST00000544738 RPRD2Q5VT52 1461 aaKnown RBP24.73■■□□□ 1.55
DDX55-212ENST00000544738 SETD5Q9C0A6 1442 aa24.72■■□□□ 1.55
DDX55-212ENST00000544738 ADAMTS2O95450 1211 aa24.72■■□□□ 1.55
DDX55-212ENST00000544738 TMEM131LA2VDJ0 1609 aa24.72■■□□□ 1.55
DDX55-212ENST00000544738 GCC2Q8IWJ2 1684 aa24.7■■□□□ 1.54
DDX55-212ENST00000544738 ZRANB1Q9UGI0 708 aa24.7■■□□□ 1.54
DDX55-212ENST00000544738 ITGAEP38570 1179 aa24.69■■□□□ 1.54
DDX55-212ENST00000544738 PTPRUQ92729 1446 aa24.69■■□□□ 1.54
DDX55-212ENST00000544738 ASXL1Q8IXJ9 1541 aa24.68■■□□□ 1.54
DDX55-212ENST00000544738 FOXD1Q16676 465 aa24.68■■□□□ 1.54
DDX55-212ENST00000544738 UNC13BO14795 1591 aa24.66■■□□□ 1.54
DDX55-212ENST00000544738 ATAD2Q6PL18 1390 aa24.66■■□□□ 1.54
DDX55-212ENST00000544738 PNPLA6Q8IY17 1366 aa24.65■■□□□ 1.54
DDX55-212ENST00000544738 MST1RQ04912 1400 aa24.64■■□□□ 1.54
DDX55-212ENST00000544738 DCCP43146 1447 aa24.63■■□□□ 1.53
DDX55-212ENST00000544738 TRPM2O94759 1503 aa24.63■■□□□ 1.53
DDX55-212ENST00000544738 USP21Q9UK80 565 aa24.63■■□□□ 1.53
DDX55-212ENST00000544738 NUP155O75694 1391 aa24.59■■□□□ 1.53
DDX55-212ENST00000544738 TRPC5Q9UL62 973 aaPredicted RBP24.59■■□□□ 1.53
DDX55-212ENST00000544738 RRBP1Q9P2E9 1410 aaKnown RBP24.58■■□□□ 1.53
DDX55-212ENST00000544738 IQGAP3Q86VI3 1631 aa24.57■■□□□ 1.52
DDX55-212ENST00000544738 NHSL1Q5SYE7 1610 aa24.55■■□□□ 1.52
DDX55-212ENST00000544738 ZNF326Q5BKZ1 582 aaKnown RBP24.55■■□□□ 1.52
DDX55-212ENST00000544738 METP08581 1390 aa24.54■■□□□ 1.52
DDX55-212ENST00000544738 E9PCH4 1651 aa24.53■■□□□ 1.52
DDX55-212ENST00000544738 EP400Q96L91 3159 aa24.53■■□□□ 1.52
DDX55-212ENST00000544738 SETBP1Q9Y6X0 1596 aa24.51■■□□□ 1.51
DDX55-212ENST00000544738 CCDC125Q86Z20 511 aa24.51■■□□□ 1.51
DDX55-212ENST00000544738 FNBP4Q8N3X1 1017 aaPredicted RBP24.51■■□□□ 1.51
DDX55-212ENST00000544738 ORAI2Q96SN7 254 aa24.5■■□□□ 1.51
DDX55-212ENST00000544738 ADGRL3Q9HAR2 1447 aa24.49■■□□□ 1.51
DDX55-212ENST00000544738 C1orf167Q5SNV9 1468 aa24.46■■□□□ 1.51
DDX55-212ENST00000544738 SOS2Q07890 1332 aaPredicted RBP24.46■■□□□ 1.51
DDX55-212ENST00000544738 XRN1Q8IZH2 1706 aaKnown RBP24.46■■□□□ 1.51
DDX55-212ENST00000544738 ATRNO75882 1429 aa24.44■■□□□ 1.5
DDX55-212ENST00000544738 NAIPQ13075 1403 aa24.43■■□□□ 1.5
DDX55-212ENST00000544738 PTCH1Q13635 1447 aa24.43■■□□□ 1.5
DDX55-212ENST00000544738 NRXN3Q9Y4C0 1643 aa24.42■■□□□ 1.5
DDX55-212ENST00000544738 GJD4Q96KN9 370 aaPredicted RBP24.4■■□□□ 1.5
DDX55-212ENST00000544738 HFM1A2PYH4 1435 aa24.37■■□□□ 1.49
DDX55-212ENST00000544738 DEFB132Q7Z7B7 95 aa24.35■■□□□ 1.49
DDX55-212ENST00000544738 SPHKAPQ2M3C7 1700 aa24.35■■□□□ 1.49
DDX55-212ENST00000544738 NALCNQ8IZF0 1738 aa24.35■■□□□ 1.49
DDX55-212ENST00000544738 BCL9LQ86UU0 1499 aa24.34■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms