RNA–Protein interactions for RNA: ENST00000544373.5

CHEK1-218, Transcript of checkpoint kinase 1, humanhuman

TSL 1 (best) BASIC

Gene CHEK1, Length 1,653 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHEK1-218ENST00000544373 TOM1O60784 492 aa16.22■□□□□ 0.19
CHEK1-218ENST00000544373 KDM5AP29375 1690 aaKnown RBP16.22■□□□□ 0.19
CHEK1-218ENST00000544373 GCC2Q8IWJ2 1684 aa16.22■□□□□ 0.19
CHEK1-218ENST00000544373 NUTM2DQ5VT03 806 aaPredicted RBP16.21■□□□□ 0.19
CHEK1-218ENST00000544373 ZFYVE9O95405 1425 aa16.21■□□□□ 0.19
CHEK1-218ENST00000544373 BCANQ96GW7 911 aa16.21■□□□□ 0.18
CHEK1-218ENST00000544373 RIMS2Q9UQ26 1411 aa16.2■□□□□ 0.18
CHEK1-218ENST00000544373 TMEM131LA2VDJ0 1609 aa16.19■□□□□ 0.18
CHEK1-218ENST00000544373 ALKQ9UM73 1620 aa16.19■□□□□ 0.18
CHEK1-218ENST00000544373 KCNA6P17658 529 aa16.18■□□□□ 0.18
CHEK1-218ENST00000544373 RBM33Q96EV2 1170 aaKnown RBP16.18■□□□□ 0.18
CHEK1-218ENST00000544373 HFM1A2PYH4 1435 aa16.18■□□□□ 0.18
CHEK1-218ENST00000544373 PPP1R15AO75807 674 aaPredicted RBP16.18■□□□□ 0.18
CHEK1-218ENST00000544373 HSPA1LP34931 641 aa16.18■□□□□ 0.18
CHEK1-218ENST00000544373 TRIM52Q96A61 297 aa16.16■□□□□ 0.18
CHEK1-218ENST00000544373 PLEKHG1Q9ULL1 1385 aa16.16■□□□□ 0.18
CHEK1-218ENST00000544373 HDGFP51858 240 aaKnown RBP16.15■□□□□ 0.18
CHEK1-218ENST00000544373 TMEM94Q12767 1356 aa16.14■□□□□ 0.17
CHEK1-218ENST00000544373 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.14■□□□□ 0.17
CHEK1-218ENST00000544373 DISP3Q9P2K9 1392 aa16.14■□□□□ 0.17
CHEK1-218ENST00000544373 MYO5BQ9ULV0 1848 aa16.13■□□□□ 0.17
CHEK1-218ENST00000544373 PROSER2Q86WR7 435 aaPredicted RBP16.13■□□□□ 0.17
CHEK1-218ENST00000544373 TBX22Q9Y458 520 aa16.11■□□□□ 0.17
CHEK1-218ENST00000544373 ADAMTS13Q76LX8 1427 aa16.11■□□□□ 0.17
CHEK1-218ENST00000544373 SLC4A1APQ9BWU0 796 aaKnown RBP16.1■□□□□ 0.17
CHEK1-218ENST00000544373 ZNF326Q5BKZ1 582 aaKnown RBP16.09■□□□□ 0.17
CHEK1-218ENST00000544373 ILDR2Q71H61 639 aa16.08■□□□□ 0.16
CHEK1-218ENST00000544373 XIRP1Q702N8 1843 aaKnown RBP16.07■□□□□ 0.16
CHEK1-218ENST00000544373 SPHKAPQ2M3C7 1700 aa16.07■□□□□ 0.16
CHEK1-218ENST00000544373 NWD1Q149M9 1564 aa16.06■□□□□ 0.16
CHEK1-218ENST00000544373 TRPM2O94759 1503 aa16.06■□□□□ 0.16
CHEK1-218ENST00000544373 NKTRP30414 1462 aaKnown RBP16.05■□□□□ 0.16
CHEK1-218ENST00000544373 CLTCL1P53675 1640 aa16.05■□□□□ 0.16
CHEK1-218ENST00000544373 PTPRUQ92729 1446 aa16.03■□□□□ 0.16
CHEK1-218ENST00000544373 AMOTL2Q9Y2J4 779 aa16.03■□□□□ 0.16
CHEK1-218ENST00000544373 MPHOSPH9Q99550 1183 aa16.02■□□□□ 0.15
CHEK1-218ENST00000544373 PIK3R4Q99570 1358 aa16.01■□□□□ 0.15
CHEK1-218ENST00000544373 CHD2O14647 1828 aaKnown RBP16.01■□□□□ 0.15
CHEK1-218ENST00000544373 FAM135BQ49AJ0 1406 aa16.01■□□□□ 0.15
CHEK1-218ENST00000544373 METP08581 1390 aa16■□□□□ 0.15
CHEK1-218ENST00000544373 MSH6P52701 1360 aa16■□□□□ 0.15
CHEK1-218ENST00000544373 NEXMIFQ5QGS0 1516 aa15.99■□□□□ 0.15
CHEK1-218ENST00000544373 SLAIN2Q9P270 581 aa15.99■□□□□ 0.15
CHEK1-218ENST00000544373 NRXN3Q9Y4C0 1643 aa15.99■□□□□ 0.15
CHEK1-218ENST00000544373 DIP2AQ14689 1571 aa15.98■□□□□ 0.15
CHEK1-218ENST00000544373 C14orf37Q86TY3 774 aa15.98■□□□□ 0.15
CHEK1-218ENST00000544373 SETBP1Q9Y6X0 1596 aa15.97■□□□□ 0.15
CHEK1-218ENST00000544373 SETD5Q9C0A6 1442 aa15.97■□□□□ 0.15
CHEK1-218ENST00000544373 C19orf44Q9H6X5 657 aa15.95■□□□□ 0.14
CHEK1-218ENST00000544373 NCOA3Q9Y6Q9 1424 aa15.95■□□□□ 0.14
CHEK1-218ENST00000544373 VGFO15240 615 aaPredicted RBP15.95■□□□□ 0.14
CHEK1-218ENST00000544373 RGL3Q3MIN7 710 aa15.94■□□□□ 0.14
CHEK1-218ENST00000544373 RPGRIP1LQ68CZ1 1315 aa15.94■□□□□ 0.14
CHEK1-218ENST00000544373 MED1Q15648 1581 aaPredicted RBP15.94■□□□□ 0.14
CHEK1-218ENST00000544373 RAB3GAP2Q9H2M9 1393 aa15.93■□□□□ 0.14
CHEK1-218ENST00000544373 CCDC144AA2RUR9 1427 aa15.92■□□□□ 0.14
CHEK1-218ENST00000544373 ROBO1Q9Y6N7 1651 aa15.92■□□□□ 0.14
CHEK1-218ENST00000544373 KIF1BO60333 1816 aa15.92■□□□□ 0.14
CHEK1-218ENST00000544373 ATF3P18847 181 aa15.92■□□□□ 0.14
CHEK1-218ENST00000544373 CADPS2Q86UW7 1296 aa15.91■□□□□ 0.14
CHEK1-218ENST00000544373 SPATA31E1Q6ZUB1 1445 aa15.9■□□□□ 0.14
CHEK1-218ENST00000544373 ADGRF5Q8IZF2 1346 aa15.9■□□□□ 0.14
CHEK1-218ENST00000544373 XRN1Q8IZH2 1706 aaKnown RBP15.89■□□□□ 0.13
CHEK1-218ENST00000544373 SIPA1L2Q9P2F8 1722 aaPredicted RBP15.88■□□□□ 0.13
CHEK1-218ENST00000544373 SOCS7O14512 581 aa15.87■□□□□ 0.13
CHEK1-218ENST00000544373 ROBO2Q9HCK4 1378 aa15.87■□□□□ 0.13
CHEK1-218ENST00000544373 BRINP3Q76B58 766 aa15.86■□□□□ 0.13
CHEK1-218ENST00000544373 ACIN1Q9UKV3 1341 aaKnown RBP15.85■□□□□ 0.13
CHEK1-218ENST00000544373 RGS17Q9UGC6 210 aaPredicted RBP15.85■□□□□ 0.13
CHEK1-218ENST00000544373 ADGRL3Q9HAR2 1447 aa15.83■□□□□ 0.13
CHEK1-218ENST00000544373 PPLO60437 1756 aa15.83■□□□□ 0.13
CHEK1-218ENST00000544373 ANKRD30BQ9BXX2 1392 aa15.83■□□□□ 0.12
CHEK1-218ENST00000544373 DCCP43146 1447 aa15.83■□□□□ 0.12
CHEK1-218ENST00000544373 MST1RQ04912 1400 aa15.83■□□□□ 0.12
CHEK1-218ENST00000544373 SETD1AO15047 1707 aaKnown RBP15.83■□□□□ 0.12
CHEK1-218ENST00000544373 TMEM132EQ6IEE7 984 aa15.83■□□□□ 0.12
CHEK1-218ENST00000544373 PTCH1Q13635 1447 aa15.82■□□□□ 0.12
CHEK1-218ENST00000544373 DDX17Q92841 729 aaKnown RBP15.81■□□□□ 0.12
CHEK1-218ENST00000544373 STK26Q9P289 416 aa15.81■□□□□ 0.12
CHEK1-218ENST00000544373 JCADQ9P266 1359 aa15.8■□□□□ 0.12
CHEK1-218ENST00000544373 HRCP23327 699 aa15.79■□□□□ 0.12
CHEK1-218ENST00000544373 PHLPP1O60346 1717 aa15.79■□□□□ 0.12
CHEK1-218ENST00000544373 PIK3C2GO75747 1445 aa15.79■□□□□ 0.12
CHEK1-218ENST00000544373 WAPLQ7Z5K2 1190 aa15.79■□□□□ 0.12
CHEK1-218ENST00000544373 PRAG1Q86YV5 1406 aa15.79■□□□□ 0.12
CHEK1-218ENST00000544373 COL16A1Q07092 1604 aaPredicted RBP15.79■□□□□ 0.12
CHEK1-218ENST00000544373 ORAI2Q96SN7 254 aa15.77■□□□□ 0.12
CHEK1-218ENST00000544373 NALCNQ8IZF0 1738 aa15.77■□□□□ 0.12
CHEK1-218ENST00000544373 ASXL1Q8IXJ9 1541 aa15.77■□□□□ 0.12
CHEK1-218ENST00000544373 AHDC1Q5TGY3 1603 aaPredicted RBP15.77■□□□□ 0.11
CHEK1-218ENST00000544373 CFAP70Q5T0N1 1121 aa15.76■□□□□ 0.11
CHEK1-218ENST00000544373 C14orf93Q9H972 538 aaKnown RBP15.76■□□□□ 0.11
CHEK1-218ENST00000544373 LRPPRCP42704 1394 aaKnown RBP15.76■□□□□ 0.11
CHEK1-218ENST00000544373 C1orf167Q5SNV9 1468 aa15.76■□□□□ 0.11
CHEK1-218ENST00000544373 PLEKHH1Q9ULM0 1364 aa15.75■□□□□ 0.11
CHEK1-218ENST00000544373 POTEAQ6S8J7 498 aa15.75■□□□□ 0.11
CHEK1-218ENST00000544373 IFT172Q9UG01 1749 aa15.75■□□□□ 0.11
CHEK1-218ENST00000544373 ABCC11Q96J66 1382 aa15.75■□□□□ 0.11
CHEK1-218ENST00000544373 NRXN1Q9ULB1 1477 aa15.74■□□□□ 0.11
CHEK1-218ENST00000544373 TECPR2O15040 1411 aa15.73■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms