RNA–Protein interactions for RNA: ENST00000543162.1

DDB1-221, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 4

Gene DDB1, Length 575 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-221ENST00000543162 UBR1Q8IWV7 1749 aa15.19■□□□□ 0.02
DDB1-221ENST00000543162 SETD1BQ9UPS6 1966 aaKnown RBP15.18■□□□□ 0.02
DDB1-221ENST00000543162 KDM4FA0A1W2PPD8 638 aa15.18■□□□□ 0.02
DDB1-221ENST00000543162 VGFO15240 615 aaPredicted RBP15.18■□□□□ 0.02
DDB1-221ENST00000543162 ADGRF5Q8IZF2 1346 aa15.17■□□□□ 0.02
DDB1-221ENST00000543162 RALGAPBQ86X10 1494 aa15.16■□□□□ 0.02
DDB1-221ENST00000543162 RIMS2Q9UQ26 1411 aa15.16■□□□□ 0.02
DDB1-221ENST00000543162 CEP170BQ9Y4F5 1589 aaPredicted RBP15.15■□□□□ 0.02
DDB1-221ENST00000543162 NRXN1Q9ULB1 1477 aa15.15■□□□□ 0.02
DDB1-221ENST00000543162 HDGFP51858 240 aaKnown RBP15.15■□□□□ 0.02
DDB1-221ENST00000543162 NUTM2DQ5VT03 806 aaPredicted RBP15.15■□□□□ 0.02
DDB1-221ENST00000543162 ZFYVE9O95405 1425 aa15.15■□□□□ 0.02
DDB1-221ENST00000543162 TRPM1Q7Z4N2 1603 aa15.14■□□□□ 0.01
DDB1-221ENST00000543162 TMEM2Q9UHN6 1383 aa15.14■□□□□ 0.01
DDB1-221ENST00000543162 THEMISQ8N1K5 641 aaPredicted RBP15.14■□□□□ 0.01
DDB1-221ENST00000543162 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.14■□□□□ 0.01
DDB1-221ENST00000543162 ZNF142P52746 1687 aaPredicted RBP15.13■□□□□ 0.01
DDB1-221ENST00000543162 ROCK2O75116 1388 aaKnown RBP15.12■□□□□ 0.01
DDB1-221ENST00000543162 PIK3C2GO75747 1445 aa15.12■□□□□ 0.01
DDB1-221ENST00000543162 KIAA1210Q9ULL0 1709 aa15.12■□□□□ 0.01
DDB1-221ENST00000543162 NBPF1Q3BBV0 1214 aa15.1■□□□□ 0.01
DDB1-221ENST00000543162 CARD11Q9BXL7 1154 aa15.1■□□□□ 0.01
DDB1-221ENST00000543162 EID1Q9Y6B2 187 aa15.1■□□□□ 0.01
DDB1-221ENST00000543162 SLIT1O75093 1534 aa15.1■□□□□ 0.01
DDB1-221ENST00000543162 ARHGAP23Q9P227 1491 aa15.09■□□□□ 0.01
DDB1-221ENST00000543162 CFAP70Q5T0N1 1121 aa15.09■□□□□ 0.01
DDB1-221ENST00000543162 GPRASP1Q5JY77 1395 aa15.09■□□□□ 0.01
DDB1-221ENST00000543162 EIF4G2P78344 907 aaKnown RBP eCLIP15.08■□□□□ 0
DDB1-221ENST00000543162 TXNDC2Q86VQ3 553 aa15.08■□□□□ 0
DDB1-221ENST00000543162 C14orf93Q9H972 538 aaKnown RBP15.08■□□□□ 0
DDB1-221ENST00000543162 LAMC1P11047 1609 aa15.07■□□□□ 0
DDB1-221ENST00000543162 SENP3Q9H4L4 574 aaPredicted RBP15.07■□□□□ 0
DDB1-221ENST00000543162 ZNF316A6NFI3 1004 aaPredicted RBP15.06■□□□□ 0
DDB1-221ENST00000543162 LTKP29376 864 aa15.06■□□□□ 0
DDB1-221ENST00000543162 USP47Q96K76 1375 aa15.06■□□□□ 0
DDB1-221ENST00000543162 HSPA5P11021 654 aaKnown RBP15.05■□□□□ -0
DDB1-221ENST00000543162 BCANQ96GW7 911 aa15.05■□□□□ -0
DDB1-221ENST00000543162 SCAF11Q99590 1463 aaKnown RBP15.05■□□□□ -0
DDB1-221ENST00000543162 SETBP1Q9Y6X0 1596 aa15.05■□□□□ -0
DDB1-221ENST00000543162 PLEKHG1Q9ULL1 1385 aa15.04■□□□□ -0
DDB1-221ENST00000543162 ANKLE2Q86XL3 938 aa15.04■□□□□ -0
DDB1-221ENST00000543162 ALKQ9UM73 1620 aa15.03■□□□□ -0
DDB1-221ENST00000543162 HIRIP3Q9BW71 556 aaPredicted RBP15.02■□□□□ -0
DDB1-221ENST00000543162 ADGRB1O14514 1584 aa15.02□□□□□ -0.01
DDB1-221ENST00000543162 IQGAP1P46940 1657 aa15.01□□□□□ -0.01
DDB1-221ENST00000543162 TMEM132EQ6IEE7 984 aa15.01□□□□□ -0.01
DDB1-221ENST00000543162 NRXN3Q9Y4C0 1643 aa15.01□□□□□ -0.01
DDB1-221ENST00000543162 EIF3AQ14152 1382 aaKnown RBP14.98□□□□□ -0.01
DDB1-221ENST00000543162 ASXL1Q8IXJ9 1541 aa14.98□□□□□ -0.01
DDB1-221ENST00000543162 SETD1AO15047 1707 aaKnown RBP14.98□□□□□ -0.01
DDB1-221ENST00000543162 ST20-MTHFSA0A0A6YYL1 179 aa14.98□□□□□ -0.01
DDB1-221ENST00000543162 ADAMTS13Q76LX8 1427 aa14.98□□□□□ -0.01
DDB1-221ENST00000543162 LMTK3Q96Q04 1460 aa14.97□□□□□ -0.01
DDB1-221ENST00000543162 POLR1AO95602 1720 aaPredicted RBP14.97□□□□□ -0.01
DDB1-221ENST00000543162 DIP2AQ14689 1571 aa14.96□□□□□ -0.01
DDB1-221ENST00000543162 SLC26A8Q96RN1 970 aa14.96□□□□□ -0.01
DDB1-221ENST00000543162 YTHDC2Q9H6S0 1430 aaKnown RBP14.96□□□□□ -0.01
DDB1-221ENST00000543162 STK26Q9P289 416 aa14.96□□□□□ -0.01
DDB1-221ENST00000543162 TRAK1Q9UPV9 953 aa14.96□□□□□ -0.01
DDB1-221ENST00000543162 TBX22Q9Y458 520 aa14.96□□□□□ -0.01
DDB1-221ENST00000543162 METP08581 1390 aa14.96□□□□□ -0.02
DDB1-221ENST00000543162 MED14O60244 1454 aa14.95□□□□□ -0.02
DDB1-221ENST00000543162 NCKAP5LQ9HCH0 1330 aa14.95□□□□□ -0.02
DDB1-221ENST00000543162 NPHP4O75161 1426 aaPredicted RBP14.95□□□□□ -0.02
DDB1-221ENST00000543162 HSPA2P54652 639 aa14.95□□□□□ -0.02
DDB1-221ENST00000543162 LRPPRCP42704 1394 aaKnown RBP14.95□□□□□ -0.02
DDB1-221ENST00000543162 ABCC11Q96J66 1382 aa14.92□□□□□ -0.02
DDB1-221ENST00000543162 ARHGEF28Q8N1W1 1705 aaKnown RBP14.92□□□□□ -0.02
DDB1-221ENST00000543162 CENPJQ9HC77 1338 aaPredicted RBP14.92□□□□□ -0.02
DDB1-221ENST00000543162 TESK2Q96S53 571 aa14.91□□□□□ -0.02
DDB1-221ENST00000543162 DLC1Q96QB1 1528 aa14.9□□□□□ -0.02
DDB1-221ENST00000543162 PIK3R4Q99570 1358 aa14.89□□□□□ -0.03
DDB1-221ENST00000543162 SLC24A1O60721 1099 aa14.89□□□□□ -0.03
DDB1-221ENST00000543162 POGKQ9P215 609 aa14.89□□□□□ -0.03
DDB1-221ENST00000543162 KNDC1Q76NI1 1749 aa14.89□□□□□ -0.03
DDB1-221ENST00000543162 QRICH2Q9H0J4 1663 aa14.88□□□□□ -0.03
DDB1-221ENST00000543162 C11orf95C9JLR9 678 aaPredicted RBP14.88□□□□□ -0.03
DDB1-221ENST00000543162 TMF1P82094 1093 aa14.88□□□□□ -0.03
DDB1-221ENST00000543162 PRAM1Q96QH2 718 aa14.88□□□□□ -0.03
DDB1-221ENST00000543162 TECPR2O15040 1411 aa14.88□□□□□ -0.03
DDB1-221ENST00000543162 WASHC2AQ641Q2 1341 aa14.88□□□□□ -0.03
DDB1-221ENST00000543162 CCDC7Q96M83 1385 aa14.87□□□□□ -0.03
DDB1-221ENST00000543162 SBNO2Q9Y2G9 1366 aa14.87□□□□□ -0.03
DDB1-221ENST00000543162 PTPRUQ92729 1446 aa14.87□□□□□ -0.03
DDB1-221ENST00000543162 SIRT1Q96EB6 747 aa14.87□□□□□ -0.03
DDB1-221ENST00000543162 AMOTL2Q9Y2J4 779 aa14.87□□□□□ -0.03
DDB1-221ENST00000543162 CPS1P31327 1500 aa14.87□□□□□ -0.03
DDB1-221ENST00000543162 FAM135BQ49AJ0 1406 aa14.86□□□□□ -0.03
DDB1-221ENST00000543162 SAFB2Q14151 953 aaKnown RBP eCLIP14.86□□□□□ -0.03
DDB1-221ENST00000543162 KIF7Q2M1P5 1343 aa14.86□□□□□ -0.03
DDB1-221ENST00000543162 POLR3GLQ9BT43 218 aa14.85□□□□□ -0.03
DDB1-221ENST00000543162 STRCQ7RTU9 1775 aa14.85□□□□□ -0.03
DDB1-221ENST00000543162 DISP3Q9P2K9 1392 aa14.85□□□□□ -0.03
DDB1-221ENST00000543162 XRN1Q8IZH2 1706 aaKnown RBP14.84□□□□□ -0.03
DDB1-221ENST00000543162 CDCA8Q53HL2 280 aa14.84□□□□□ -0.03
DDB1-221ENST00000543162 WAPLQ7Z5K2 1190 aa14.84□□□□□ -0.03
DDB1-221ENST00000543162 CHD2O14647 1828 aaKnown RBP14.84□□□□□ -0.03
DDB1-221ENST00000543162 ROBO2Q9HCK4 1378 aa14.84□□□□□ -0.03
DDB1-221ENST00000543162 PLEKHH1Q9ULM0 1364 aa14.83□□□□□ -0.04
DDB1-221ENST00000543162 PTCH1Q13635 1447 aa14.83□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 95.1 ms