RNA–Protein interactions for RNA: ENST00000542919.1

NOP2-215, Transcript of NOP2 nucleolar protein, human

TSL 2

Gene NOP2, Length 894 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NOP2-215	ENST00000542919	USP47	Q96K76	1375 aa		13.68	□□□□□ -0.22
NOP2-215	ENST00000542919	LAMC1	P11047	1609 aa		13.68	□□□□□ -0.22
NOP2-215	ENST00000542919	CEBPA	P49715	358 aa	Predicted RBP	13.67	□□□□□ -0.22
NOP2-215	ENST00000542919	NBPF1	Q3BBV0	1214 aa		13.67	□□□□□ -0.22
NOP2-215	ENST00000542919	SLC52A1	Q9NWF4	448 aa		13.67	□□□□□ -0.22
NOP2-215	ENST00000542919	TMEM131L	A2VDJ0	1609 aa		13.67	□□□□□ -0.22
NOP2-215	ENST00000542919	NEXMIF	Q5QGS0	1516 aa		13.66	□□□□□ -0.22
NOP2-215	ENST00000542919	PPL	O60437	1756 aa		13.66	□□□□□ -0.22
NOP2-215	ENST00000542919	ADGRF5	Q8IZF2	1346 aa		13.65	□□□□□ -0.22
NOP2-215	ENST00000542919	SETD1B	Q9UPS6	1966 aa	Known RBP	13.65	□□□□□ -0.22
NOP2-215	ENST00000542919	ESF1	Q9H501	851 aa	Known RBP	13.65	□□□□□ -0.22
NOP2-215	ENST00000542919	ROCK2	O75116	1388 aa	Known RBP	13.65	□□□□□ -0.22
NOP2-215	ENST00000542919	C11orf95	C9JLR9	678 aa	Predicted RBP	13.64	□□□□□ -0.23
NOP2-215	ENST00000542919	CARD11	Q9BXL7	1154 aa		13.64	□□□□□ -0.23
NOP2-215	ENST00000542919	RPGRIP1L	Q68CZ1	1315 aa		13.64	□□□□□ -0.23
NOP2-215	ENST00000542919	KIAA1210	Q9ULL0	1709 aa		13.63	□□□□□ -0.23
NOP2-215	ENST00000542919	PIK3C2G	O75747	1445 aa		13.63	□□□□□ -0.23
NOP2-215	ENST00000542919	STRC	Q7RTU9	1775 aa		13.63	□□□□□ -0.23
NOP2-215	ENST00000542919	WASHC2A	Q641Q2	1341 aa		13.63	□□□□□ -0.23
NOP2-215	ENST00000542919	CHGA	P10645	457 aa	Known RBP	13.62	□□□□□ -0.23
NOP2-215	ENST00000542919	ZFYVE9	O95405	1425 aa		13.62	□□□□□ -0.23
NOP2-215	ENST00000542919	A2ML1	A8K2U0	1454 aa		13.61	□□□□□ -0.23
NOP2-215	ENST00000542919	TNR	Q92752	1358 aa		13.61	□□□□□ -0.23
NOP2-215	ENST00000542919	CCDC7	Q96M83	1385 aa		13.6	□□□□□ -0.23
NOP2-215	ENST00000542919	MYO5B	Q9ULV0	1848 aa		13.6	□□□□□ -0.23
NOP2-215	ENST00000542919	IQGAP1	P46940	1657 aa		13.59	□□□□□ -0.23
NOP2-215	ENST00000542919	ADGRB1	O14514	1584 aa		13.58	□□□□□ -0.23
NOP2-215	ENST00000542919	CFAP70	Q5T0N1	1121 aa		13.58	□□□□□ -0.24
NOP2-215	ENST00000542919	KIF7	Q2M1P5	1343 aa		13.58	□□□□□ -0.24
NOP2-215	ENST00000542919	SCAF11	Q99590	1463 aa	Known RBP	13.57	□□□□□ -0.24
NOP2-215	ENST00000542919	ST20-MTHFS	A0A0A6YYL1	179 aa		13.57	□□□□□ -0.24
NOP2-215	ENST00000542919	DDX10	Q13206	875 aa	Known RBP	13.57	□□□□□ -0.24
NOP2-215	ENST00000542919	CERK	Q8TCT0	537 aa		13.57	□□□□□ -0.24
NOP2-215	ENST00000542919	SETBP1	Q9Y6X0	1596 aa		13.57	□□□□□ -0.24
NOP2-215	ENST00000542919	MIER1	Q8N108	512 aa		13.56	□□□□□ -0.24
NOP2-215	ENST00000542919	TESK2	Q96S53	571 aa		13.56	□□□□□ -0.24
NOP2-215	ENST00000542919	C14orf93	Q9H972	538 aa	Known RBP	13.56	□□□□□ -0.24
NOP2-215	ENST00000542919	DMRT2	Q9Y5R5	561 aa		13.56	□□□□□ -0.24
NOP2-215	ENST00000542919	ASXL1	Q8IXJ9	1541 aa		13.55	□□□□□ -0.24
NOP2-215	ENST00000542919	NLRP1	Q9C000	1473 aa		13.55	□□□□□ -0.24
NOP2-215	ENST00000542919	MYO3A	Q8NEV4	1616 aa		13.54	□□□□□ -0.24
NOP2-215	ENST00000542919	KDM5A	P29375	1690 aa	Known RBP	13.54	□□□□□ -0.24
NOP2-215	ENST00000542919	ZNF142	P52746	1687 aa	Predicted RBP	13.54	□□□□□ -0.24
NOP2-215	ENST00000542919	POLR1A	O95602	1720 aa	Predicted RBP	13.54	□□□□□ -0.24
NOP2-215	ENST00000542919	NUTM2D	Q5VT03	806 aa	Predicted RBP	13.54	□□□□□ -0.24
NOP2-215	ENST00000542919	RIMS2	Q9UQ26	1411 aa		13.54	□□□□□ -0.24
NOP2-215	ENST00000542919	VGF	O15240	615 aa	Predicted RBP	13.53	□□□□□ -0.24
NOP2-215	ENST00000542919	UBR1	Q8IWV7	1749 aa		13.53	□□□□□ -0.24
NOP2-215	ENST00000542919	CEP170B	Q9Y4F5	1589 aa	Predicted RBP	13.5	□□□□□ -0.25
NOP2-215	ENST00000542919	DISP3	Q9P2K9	1392 aa		13.5	□□□□□ -0.25
NOP2-215	ENST00000542919	NRXN3	Q9Y4C0	1643 aa		13.5	□□□□□ -0.25
NOP2-215	ENST00000542919	TMEM2	Q9UHN6	1383 aa		13.49	□□□□□ -0.25
NOP2-215	ENST00000542919	STAG3	Q9UJ98	1225 aa		13.49	□□□□□ -0.25
NOP2-215	ENST00000542919	ALK	Q9UM73	1620 aa		13.48	□□□□□ -0.25
NOP2-215	ENST00000542919	ARHGAP23	Q9P227	1491 aa		13.48	□□□□□ -0.25
NOP2-215	ENST00000542919	SETD1A	O15047	1707 aa	Known RBP	13.47	□□□□□ -0.25
NOP2-215	ENST00000542919	TMEM132E	Q6IEE7	984 aa		13.47	□□□□□ -0.25
NOP2-215	ENST00000542919	SLIT1	O75093	1534 aa		13.47	□□□□□ -0.25
NOP2-215	ENST00000542919	LTBP4	Q8N2S1	1624 aa		13.46	□□□□□ -0.25
NOP2-215	ENST00000542919	SBNO2	Q9Y2G9	1366 aa		13.46	□□□□□ -0.25
NOP2-215	ENST00000542919	EIF3A	Q14152	1382 aa	Known RBP	13.45	□□□□□ -0.26
NOP2-215	ENST00000542919	ABCF1	Q8NE71	845 aa	Known RBP eCLIP	13.44	□□□□□ -0.26
NOP2-215	ENST00000542919	LTK	P29376	864 aa		13.43	□□□□□ -0.26
NOP2-215	ENST00000542919	ADAMTS13	Q76LX8	1427 aa		13.43	□□□□□ -0.26
NOP2-215	ENST00000542919	ARHGEF28	Q8N1W1	1705 aa	Known RBP	13.43	□□□□□ -0.26
NOP2-215	ENST00000542919	IQSEC2	Q5JU85	1478 aa		13.42	□□□□□ -0.26
NOP2-215	ENST00000542919	YTHDC2	Q9H6S0	1430 aa	Known RBP	13.42	□□□□□ -0.26
NOP2-215	ENST00000542919	SENP3	Q9H4L4	574 aa	Predicted RBP	13.42	□□□□□ -0.26
NOP2-215	ENST00000542919	TRAK1	Q9UPV9	953 aa		13.42	□□□□□ -0.26
NOP2-215	ENST00000542919	PLEKHG1	Q9ULL1	1385 aa		13.42	□□□□□ -0.26
NOP2-215	ENST00000542919	MED14	O60244	1454 aa		13.42	□□□□□ -0.26
NOP2-215	ENST00000542919	CENPJ	Q9HC77	1338 aa	Predicted RBP	13.41	□□□□□ -0.26
NOP2-215	ENST00000542919	NCKAP5L	Q9HCH0	1330 aa		13.41	□□□□□ -0.26
NOP2-215	ENST00000542919	TMF1	P82094	1093 aa		13.41	□□□□□ -0.26
NOP2-215	ENST00000542919	LRPPRC	P42704	1394 aa	Known RBP	13.41	□□□□□ -0.26
NOP2-215	ENST00000542919	DLC1	Q96QB1	1528 aa		13.4	□□□□□ -0.26
NOP2-215	ENST00000542919	MET	P08581	1390 aa		13.4	□□□□□ -0.26
NOP2-215	ENST00000542919	QRICH2	Q9H0J4	1663 aa		13.39	□□□□□ -0.27
NOP2-215	ENST00000542919	POLR3GL	Q9BT43	218 aa		13.38	□□□□□ -0.27
NOP2-215	ENST00000542919	TULP4	Q9NRJ4	1543 aa		13.38	□□□□□ -0.27
NOP2-215	ENST00000542919	TECPR2	O15040	1411 aa		13.38	□□□□□ -0.27
NOP2-215	ENST00000542919	ZNF335	Q9H4Z2	1342 aa	Predicted RBP	13.38	□□□□□ -0.27
NOP2-215	ENST00000542919	ABCC11	Q96J66	1382 aa		13.37	□□□□□ -0.27
NOP2-215	ENST00000542919	HDGF	P51858	240 aa	Known RBP	13.37	□□□□□ -0.27
NOP2-215	ENST00000542919	TXNDC2	Q86VQ3	553 aa		13.37	□□□□□ -0.27
NOP2-215	ENST00000542919	THEMIS	Q8N1K5	641 aa	Predicted RBP	13.37	□□□□□ -0.27
NOP2-215	ENST00000542919	MYOM1	P52179	1685 aa		13.37	□□□□□ -0.27
NOP2-215	ENST00000542919	ANP32C	O43423	234 aa		13.36	□□□□□ -0.27
NOP2-215	ENST00000542919	STK26	Q9P289	416 aa		13.36	□□□□□ -0.27
NOP2-215	ENST00000542919	PLEKHH1	Q9ULM0	1364 aa		13.34	□□□□□ -0.27
NOP2-215	ENST00000542919	KNDC1	Q76NI1	1749 aa		13.34	□□□□□ -0.27
NOP2-215	ENST00000542919	PTPRU	Q92729	1446 aa		13.34	□□□□□ -0.27
NOP2-215	ENST00000542919	CCER2	I3L3R5	266 aa		13.34	□□□□□ -0.27
NOP2-215	ENST00000542919	PER1	O15534	1290 aa	Predicted RBP	13.34	□□□□□ -0.27
NOP2-215	ENST00000542919	CPS1	P31327	1500 aa		13.34	□□□□□ -0.27
NOP2-215	ENST00000542919	SLC24A1	O60721	1099 aa		13.33	□□□□□ -0.28
NOP2-215	ENST00000542919	CDCA8	Q53HL2	280 aa		13.33	□□□□□ -0.28
NOP2-215	ENST00000542919	PRAM1	Q96QH2	718 aa		13.33	□□□□□ -0.28
NOP2-215	ENST00000542919	PRKRIP1	Q9H875	184 aa	Predicted RBP	13.33	□□□□□ -0.28
NOP2-215	ENST00000542919	EID1	Q9Y6B2	187 aa		13.33	□□□□□ -0.28

Retrieved 100 of 20,778 RNA–protein pairs in 39 ms