RNA–Protein interactions for RNA: ENST00000542896.5

PDCD2-209, Transcript of programmed cell death 2, humanhuman

TSL 2 BASIC

Gene PDCD2, Length 1,082 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD2-209ENST00000542896 FAM135BQ49AJ0 1406 aa39.92■■■■□ 3.98
PDCD2-209ENST00000542896 PPP1R15AO75807 674 aaPredicted RBP39.92■■■■□ 3.98
PDCD2-209ENST00000542896 ROCK1Q13464 1354 aa39.89■■■■□ 3.98
PDCD2-209ENST00000542896 CHGAP10645 457 aaKnown RBP39.89■■■■□ 3.98
PDCD2-209ENST00000542896 ZFYVE9O95405 1425 aa39.89■■■■□ 3.98
PDCD2-209ENST00000542896 RIMS2Q9UQ26 1411 aa39.89■■■■□ 3.98
PDCD2-209ENST00000542896 UNC13BO14795 1591 aa39.89■■■■□ 3.98
PDCD2-209ENST00000542896 NKTRP30414 1462 aaKnown RBP39.88■■■■□ 3.98
PDCD2-209ENST00000542896 PLEKHG1Q9ULL1 1385 aa39.88■■■■□ 3.97
PDCD2-209ENST00000542896 NWD1Q149M9 1564 aa39.85■■■■□ 3.97
PDCD2-209ENST00000542896 GCC2Q8IWJ2 1684 aa39.84■■■■□ 3.97
PDCD2-209ENST00000542896 ITGAEP38570 1179 aa39.82■■■■□ 3.97
PDCD2-209ENST00000542896 TMEM131LA2VDJ0 1609 aa39.81■■■■□ 3.96
PDCD2-209ENST00000542896 ABCF1Q8NE71 845 aaKnown RBP eCLIP39.81■■■■□ 3.96
PDCD2-209ENST00000542896 MSH6P52701 1360 aa39.81■■■■□ 3.96
PDCD2-209ENST00000542896 NUP155O75694 1391 aa39.76■■■■□ 3.96
PDCD2-209ENST00000542896 MYO5BQ9ULV0 1848 aa39.76■■■■□ 3.96
PDCD2-209ENST00000542896 TBX22Q9Y458 520 aa39.75■■■■□ 3.95
PDCD2-209ENST00000542896 E9PCH4 1651 aa39.75■■■■□ 3.95
PDCD2-209ENST00000542896 NUTM2DQ5VT03 806 aaPredicted RBP39.74■■■■□ 3.95
PDCD2-209ENST00000542896 PPARGC1BQ86YN6 1023 aaKnown RBP39.73■■■■□ 3.95
PDCD2-209ENST00000542896 ROBO1Q9Y6N7 1651 aa39.73■■■■□ 3.95
PDCD2-209ENST00000542896 IQGAP3Q86VI3 1631 aa39.73■■■■□ 3.95
PDCD2-209ENST00000542896 SLAIN2Q9P270 581 aa39.69■■■■□ 3.94
PDCD2-209ENST00000542896 RGS17Q9UGC6 210 aaPredicted RBP39.68■■■■□ 3.94
PDCD2-209ENST00000542896 CHD2O14647 1828 aaKnown RBP39.65■■■■□ 3.94
PDCD2-209ENST00000542896 ADAMTS13Q76LX8 1427 aa39.64■■■■□ 3.94
PDCD2-209ENST00000542896 C14orf37Q86TY3 774 aa39.63■■■■□ 3.93
PDCD2-209ENST00000542896 NCOA3Q9Y6Q9 1424 aa39.61■■■■□ 3.93
PDCD2-209ENST00000542896 PIK3R4Q99570 1358 aa39.59■■■■□ 3.93
PDCD2-209ENST00000542896 DIP2AQ14689 1571 aa39.58■■■■□ 3.93
PDCD2-209ENST00000542896 JCADQ9P266 1359 aa39.5■■■■□ 3.91
PDCD2-209ENST00000542896 C19orf44Q9H6X5 657 aa39.5■■■■□ 3.91
PDCD2-209ENST00000542896 AMOTL2Q9Y2J4 779 aa39.5■■■■□ 3.91
PDCD2-209ENST00000542896 TRPM2O94759 1503 aa39.5■■■■□ 3.91
PDCD2-209ENST00000542896 PHLPP1O60346 1717 aa39.49■■■■□ 3.91
PDCD2-209ENST00000542896 CADPS2Q86UW7 1296 aa39.49■■■■□ 3.91
PDCD2-209ENST00000542896 ATF3P18847 181 aa39.48■■■■□ 3.91
PDCD2-209ENST00000542896 ZNF326Q5BKZ1 582 aaKnown RBP39.47■■■■□ 3.91
PDCD2-209ENST00000542896 POTEAQ6S8J7 498 aa39.47■■■■□ 3.91
PDCD2-209ENST00000542896 PTPRUQ92729 1446 aa39.44■■■■□ 3.9
PDCD2-209ENST00000542896 SPHKAPQ2M3C7 1700 aa39.4■■■■□ 3.9
PDCD2-209ENST00000542896 SIPA1L2Q9P2F8 1722 aaPredicted RBP39.39■■■■□ 3.9
PDCD2-209ENST00000542896 COL16A1Q07092 1604 aaPredicted RBP39.36■■■■□ 3.89
PDCD2-209ENST00000542896 RRBP1Q9P2E9 1410 aaKnown RBP39.36■■■■□ 3.89
PDCD2-209ENST00000542896 SETBP1Q9Y6X0 1596 aa39.34■■■■□ 3.89
PDCD2-209ENST00000542896 NRXN3Q9Y4C0 1643 aa39.32■■■■□ 3.88
PDCD2-209ENST00000542896 SPATA31A6Q5VVP1 1343 aa39.31■■■■□ 3.88
PDCD2-209ENST00000542896 NAIPQ13075 1403 aa39.31■■■■□ 3.88
PDCD2-209ENST00000542896 METP08581 1390 aa39.29■■■■□ 3.88
PDCD2-209ENST00000542896 AHDC1Q5TGY3 1603 aaPredicted RBP39.29■■■■□ 3.88
PDCD2-209ENST00000542896 BRINP3Q76B58 766 aa39.28■■■■□ 3.88
PDCD2-209ENST00000542896 DCCP43146 1447 aa39.28■■■■□ 3.88
PDCD2-209ENST00000542896 CLTCL1P53675 1640 aa39.26■■■■□ 3.88
PDCD2-209ENST00000542896 MEX3CQ5U5Q3 659 aaKnown RBP39.26■■■■□ 3.88
PDCD2-209ENST00000542896 XRN1Q8IZH2 1706 aaKnown RBP39.26■■■■□ 3.87
PDCD2-209ENST00000542896 TRIM52Q96A61 297 aa39.23■■■■□ 3.87
PDCD2-209ENST00000542896 NEXMIFQ5QGS0 1516 aa39.22■■■■□ 3.87
PDCD2-209ENST00000542896 LRP6O75581 1613 aa39.22■■■■□ 3.87
PDCD2-209ENST00000542896 MST1RQ04912 1400 aa39.16■■■■□ 3.86
PDCD2-209ENST00000542896 ASXL1Q8IXJ9 1541 aa39.14■■■■□ 3.86
PDCD2-209ENST00000542896 ZNF772Q68DY9 489 aaPredicted RBP39.14■■■■□ 3.86
PDCD2-209ENST00000542896 HFM1A2PYH4 1435 aa39.14■■■■□ 3.86
PDCD2-209ENST00000542896 SHPRHQ149N8 1683 aa39.13■■■■□ 3.86
PDCD2-209ENST00000542896 ADGRL3Q9HAR2 1447 aa39.13■■■■□ 3.85
PDCD2-209ENST00000542896 VGFO15240 615 aaPredicted RBP39.12■■■■□ 3.85
PDCD2-209ENST00000542896 SLC4A1APQ9BWU0 796 aaKnown RBP39.11■■■■□ 3.85
PDCD2-209ENST00000542896 KIF1BO60333 1816 aa39.1■■■■□ 3.85
PDCD2-209ENST00000542896 NUTM2BA6NNL0 878 aaPredicted RBP39.1■■■■□ 3.85
PDCD2-209ENST00000542896 NUTM2EB1AL46 878 aaPredicted RBP39.1■■■■□ 3.85
PDCD2-209ENST00000542896 NUTM2AQ8IVF1 878 aaPredicted RBP39.1■■■■□ 3.85
PDCD2-209ENST00000542896 SETD5Q9C0A6 1442 aa39.06■■■■□ 3.84
PDCD2-209ENST00000542896 LRRC59Q96AG4 307 aaKnown RBP39.04■■■■□ 3.84
PDCD2-209ENST00000542896 RPGRIP1LQ68CZ1 1315 aa39.04■■■■□ 3.84
PDCD2-209ENST00000542896 SETD1AO15047 1707 aaKnown RBP39.01■■■■□ 3.84
PDCD2-209ENST00000542896 DDX17Q92841 729 aaKnown RBP39■■■■□ 3.83
PDCD2-209ENST00000542896 PTCH1Q13635 1447 aa38.99■■■■□ 3.83
PDCD2-209ENST00000542896 NALCNQ8IZF0 1738 aa38.99■■■■□ 3.83
PDCD2-209ENST00000542896 NHSL1Q5SYE7 1610 aa38.99■■■■□ 3.83
PDCD2-209ENST00000542896 ROBO2Q9HCK4 1378 aa38.96■■■■□ 3.83
PDCD2-209ENST00000542896 C1orf167Q5SNV9 1468 aa38.94■■■■□ 3.82
PDCD2-209ENST00000542896 RXRBP28702 533 aa38.93■■■■□ 3.82
PDCD2-209ENST00000542896 AFF2P51816 1311 aa38.92■■■■□ 3.82
PDCD2-209ENST00000542896 FOXD1Q16676 465 aa38.91■■■■□ 3.82
PDCD2-209ENST00000542896 PNPLA6Q8IY17 1366 aa38.91■■■■□ 3.82
PDCD2-209ENST00000542896 PRAG1Q86YV5 1406 aa38.87■■■■□ 3.81
PDCD2-209ENST00000542896 C8orf37Q96NL8 207 aa38.85■■■■□ 3.81
PDCD2-209ENST00000542896 ORAI2Q96SN7 254 aa38.85■■■■□ 3.81
PDCD2-209ENST00000542896 PPLO60437 1756 aa38.82■■■■□ 3.81
PDCD2-209ENST00000542896 CCDC144AA2RUR9 1427 aa38.82■■■■□ 3.81
PDCD2-209ENST00000542896 RGL3Q3MIN7 710 aa38.8■■■■□ 3.8
PDCD2-209ENST00000542896 UPF1Q92900 1129 aaKnown RBP eCLIP38.8■■■■□ 3.8
PDCD2-209ENST00000542896 SOS2Q07890 1332 aaPredicted RBP38.78■■■■□ 3.8
PDCD2-209ENST00000542896 ADGRF5Q8IZF2 1346 aa38.78■■■■□ 3.8
PDCD2-209ENST00000542896 MPHOSPH9Q99550 1183 aa38.77■■■■□ 3.8
PDCD2-209ENST00000542896 CDK12Q9NYV4 1490 aaPredicted RBP38.77■■■■□ 3.8
PDCD2-209ENST00000542896 ADAMTS2O95450 1211 aa38.76■■■■□ 3.8
PDCD2-209ENST00000542896 QTRT2Q9H974 415 aaKnown RBP38.74■■■■□ 3.79
PDCD2-209ENST00000542896 NGLY1Q96IV0 654 aa38.73■■■■□ 3.79
PDCD2-209ENST00000542896 LAMC1P11047 1609 aa38.73■■■■□ 3.79
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms