RNA–Protein interactions for RNA: ENST00000542416.1

UBC-211, Transcript of ubiquitin C, humanhuman

TSL 4

Gene UBC, Length 517 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBC-211ENST00000542416 PTPN23Q9H3S7 1636 aa13.9□□□□□ -0.18
UBC-211ENST00000542416 RBM33Q96EV2 1170 aaKnown RBP13.9□□□□□ -0.18
UBC-211ENST00000542416 TBX22Q9Y458 520 aa13.9□□□□□ -0.18
UBC-211ENST00000542416 RPRD2Q5VT52 1461 aaKnown RBP13.9□□□□□ -0.18
UBC-211ENST00000542416 CFAP65Q6ZU64 1925 aaKnown RBP13.9□□□□□ -0.18
UBC-211ENST00000542416 PLEKHG1Q9ULL1 1385 aa13.89□□□□□ -0.19
UBC-211ENST00000542416 ADGRB3O60242 1522 aa13.87□□□□□ -0.19
UBC-211ENST00000542416 C14orf37Q86TY3 774 aa13.87□□□□□ -0.19
UBC-211ENST00000542416 CADPS2Q86UW7 1296 aa13.87□□□□□ -0.19
UBC-211ENST00000542416 SPATA31A6Q5VVP1 1343 aa13.87□□□□□ -0.19
UBC-211ENST00000542416 ZNF772Q68DY9 489 aaPredicted RBP13.86□□□□□ -0.19
UBC-211ENST00000542416 ANKRD50Q9ULJ7 1429 aa13.86□□□□□ -0.19
UBC-211ENST00000542416 ADGRL2O95490 1459 aa13.86□□□□□ -0.19
UBC-211ENST00000542416 CROCC2H7BZ55 1655 aa13.85□□□□□ -0.19
UBC-211ENST00000542416 NWD1Q149M9 1564 aa13.85□□□□□ -0.19
UBC-211ENST00000542416 RIMS2Q9UQ26 1411 aa13.85□□□□□ -0.19
UBC-211ENST00000542416 ATF3P18847 181 aa13.85□□□□□ -0.19
UBC-211ENST00000542416 FAM50AQ14320 339 aaKnown RBP13.85□□□□□ -0.19
UBC-211ENST00000542416 C19orf44Q9H6X5 657 aa13.85□□□□□ -0.19
UBC-211ENST00000542416 XIRP1Q702N8 1843 aaKnown RBP13.85□□□□□ -0.19
UBC-211ENST00000542416 ROBO1Q9Y6N7 1651 aa13.85□□□□□ -0.19
UBC-211ENST00000542416 ZFYVE9O95405 1425 aa13.84□□□□□ -0.19
UBC-211ENST00000542416 MEX3CQ5U5Q3 659 aaKnown RBP13.84□□□□□ -0.19
UBC-211ENST00000542416 PIK3R4Q99570 1358 aa13.83□□□□□ -0.19
UBC-211ENST00000542416 CHGAP10645 457 aaKnown RBP13.83□□□□□ -0.2
UBC-211ENST00000542416 RXRBP28702 533 aa13.77□□□□□ -0.21
UBC-211ENST00000542416 AMOTL2Q9Y2J4 779 aa13.77□□□□□ -0.21
UBC-211ENST00000542416 ADAMTS13Q76LX8 1427 aa13.76□□□□□ -0.21
UBC-211ENST00000542416 PHLPP1O60346 1717 aa13.76□□□□□ -0.21
UBC-211ENST00000542416 NUTM2DQ5VT03 806 aaPredicted RBP13.75□□□□□ -0.21
UBC-211ENST00000542416 BRINP3Q76B58 766 aa13.75□□□□□ -0.21
UBC-211ENST00000542416 UPF1Q92900 1129 aaKnown RBP eCLIP13.75□□□□□ -0.21
UBC-211ENST00000542416 DIP2AQ14689 1571 aa13.75□□□□□ -0.21
UBC-211ENST00000542416 DCCP43146 1447 aa13.74□□□□□ -0.21
UBC-211ENST00000542416 ROCK1Q13464 1354 aa13.74□□□□□ -0.21
UBC-211ENST00000542416 TRIM52Q96A61 297 aa13.74□□□□□ -0.21
UBC-211ENST00000542416 TMEM131LA2VDJ0 1609 aa13.74□□□□□ -0.21
UBC-211ENST00000542416 COL16A1Q07092 1604 aaPredicted RBP13.73□□□□□ -0.21
UBC-211ENST00000542416 LRRC59Q96AG4 307 aaKnown RBP13.73□□□□□ -0.21
UBC-211ENST00000542416 NUP155O75694 1391 aa13.72□□□□□ -0.21
UBC-211ENST00000542416 AHDC1Q5TGY3 1603 aaPredicted RBP13.72□□□□□ -0.21
UBC-211ENST00000542416 CHD2O14647 1828 aaKnown RBP13.72□□□□□ -0.21
UBC-211ENST00000542416 LRP6O75581 1613 aa13.72□□□□□ -0.21
UBC-211ENST00000542416 TRPM2O94759 1503 aa13.71□□□□□ -0.21
UBC-211ENST00000542416 NUTM2BA6NNL0 878 aaPredicted RBP13.71□□□□□ -0.21
UBC-211ENST00000542416 NUTM2EB1AL46 878 aaPredicted RBP13.71□□□□□ -0.21
UBC-211ENST00000542416 NUTM2AQ8IVF1 878 aaPredicted RBP13.71□□□□□ -0.21
UBC-211ENST00000542416 CDK12Q9NYV4 1490 aaPredicted RBP13.7□□□□□ -0.22
UBC-211ENST00000542416 ZNF326Q5BKZ1 582 aaKnown RBP13.69□□□□□ -0.22
UBC-211ENST00000542416 SETD5Q9C0A6 1442 aa13.69□□□□□ -0.22
UBC-211ENST00000542416 AFF2P51816 1311 aa13.68□□□□□ -0.22
UBC-211ENST00000542416 UNC13BO14795 1591 aa13.67□□□□□ -0.22
UBC-211ENST00000542416 PTPRUQ92729 1446 aa13.67□□□□□ -0.22
UBC-211ENST00000542416 GCC2Q8IWJ2 1684 aa13.67□□□□□ -0.22
UBC-211ENST00000542416 RBM6P78332 1123 aaKnown RBP13.66□□□□□ -0.22
UBC-211ENST00000542416 QTRT2Q9H974 415 aaKnown RBP13.66□□□□□ -0.22
UBC-211ENST00000542416 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.66□□□□□ -0.22
UBC-211ENST00000542416 FOXD1Q16676 465 aa13.65□□□□□ -0.22
UBC-211ENST00000542416 NGLY1Q96IV0 654 aa13.65□□□□□ -0.22
UBC-211ENST00000542416 SHPRHQ149N8 1683 aa13.65□□□□□ -0.22
UBC-211ENST00000542416 MST1RQ04912 1400 aa13.64□□□□□ -0.23
UBC-211ENST00000542416 ASXL1Q8IXJ9 1541 aa13.64□□□□□ -0.23
UBC-211ENST00000542416 C8orf37Q96NL8 207 aa13.64□□□□□ -0.23
UBC-211ENST00000542416 IQGAP3Q86VI3 1631 aa13.63□□□□□ -0.23
UBC-211ENST00000542416 ADGRL3Q9HAR2 1447 aa13.63□□□□□ -0.23
UBC-211ENST00000542416 E9PCH4 1651 aa13.63□□□□□ -0.23
UBC-211ENST00000542416 SETD1AO15047 1707 aaKnown RBP13.62□□□□□ -0.23
UBC-211ENST00000542416 METP08581 1390 aa13.62□□□□□ -0.23
UBC-211ENST00000542416 SETBP1Q9Y6X0 1596 aa13.62□□□□□ -0.23
UBC-211ENST00000542416 PNPLA6Q8IY17 1366 aa13.61□□□□□ -0.23
UBC-211ENST00000542416 VGFO15240 615 aaPredicted RBP13.61□□□□□ -0.23
UBC-211ENST00000542416 ITGAEP38570 1179 aa13.61□□□□□ -0.23
UBC-211ENST00000542416 MYO5BQ9ULV0 1848 aa13.61□□□□□ -0.23
UBC-211ENST00000542416 ADAMTS2O95450 1211 aa13.58□□□□□ -0.24
UBC-211ENST00000542416 DDX17Q92841 729 aaKnown RBP13.58□□□□□ -0.24
UBC-211ENST00000542416 TRPC5Q9UL62 973 aaPredicted RBP13.58□□□□□ -0.24
UBC-211ENST00000542416 C1orf167Q5SNV9 1468 aa13.57□□□□□ -0.24
UBC-211ENST00000542416 XRN1Q8IZH2 1706 aaKnown RBP13.57□□□□□ -0.24
UBC-211ENST00000542416 USP21Q9UK80 565 aa13.57□□□□□ -0.24
UBC-211ENST00000542416 SOS2Q07890 1332 aaPredicted RBP13.57□□□□□ -0.24
UBC-211ENST00000542416 RPGRIP1LQ68CZ1 1315 aa13.57□□□□□ -0.24
UBC-211ENST00000542416 ATAD2Q6PL18 1390 aa13.57□□□□□ -0.24
UBC-211ENST00000542416 RGS12O14924 1447 aa13.56□□□□□ -0.24
UBC-211ENST00000542416 PTCH1Q13635 1447 aa13.56□□□□□ -0.24
UBC-211ENST00000542416 FNBP4Q8N3X1 1017 aaPredicted RBP13.55□□□□□ -0.24
UBC-211ENST00000542416 NRXN3Q9Y4C0 1643 aa13.54□□□□□ -0.24
UBC-211ENST00000542416 ORAI2Q96SN7 254 aa13.54□□□□□ -0.24
UBC-211ENST00000542416 NHSL1Q5SYE7 1610 aa13.53□□□□□ -0.24
UBC-211ENST00000542416 CCDC125Q86Z20 511 aa13.53□□□□□ -0.24
UBC-211ENST00000542416 NPHP3Q7Z494 1330 aa13.53□□□□□ -0.24
UBC-211ENST00000542416 HFM1A2PYH4 1435 aa13.53□□□□□ -0.24
UBC-211ENST00000542416 ZRANB1Q9UGI0 708 aa13.52□□□□□ -0.25
UBC-211ENST00000542416 NEXMIFQ5QGS0 1516 aa13.51□□□□□ -0.25
UBC-211ENST00000542416 PRAG1Q86YV5 1406 aa13.51□□□□□ -0.25
UBC-211ENST00000542416 ROBO2Q9HCK4 1378 aa13.51□□□□□ -0.25
UBC-211ENST00000542416 LRPPRCP42704 1394 aaKnown RBP13.5□□□□□ -0.25
UBC-211ENST00000542416 ESCO1Q5FWF5 840 aa13.5□□□□□ -0.25
UBC-211ENST00000542416 SPHKAPQ2M3C7 1700 aa13.49□□□□□ -0.25
UBC-211ENST00000542416 SRCAPQ6ZRS2 3230 aa13.49□□□□□ -0.25
UBC-211ENST00000542416 ATRNO75882 1429 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms