RNA–Protein interactions for RNA: ENST00000542032.1

LEMD3-204, Transcript of LEM domain containing 3, humanhuman

TSL 3

Gene LEMD3, Length 645 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LEMD3-204ENST00000542032 CDCA7LQ96GN5 454 aa9.5□□□□□ -0.89
LEMD3-204ENST00000542032 PRSS12P56730 875 aa9.49□□□□□ -0.89
LEMD3-204ENST00000542032 TTC13Q8NBP0 860 aa9.49□□□□□ -0.89
LEMD3-204ENST00000542032 FAM198AQ9UFP1 575 aa9.49□□□□□ -0.89
LEMD3-204ENST00000542032 SLC19A1P41440 591 aa9.48□□□□□ -0.89
LEMD3-204ENST00000542032 PRR20EP86478 221 aa9.47□□□□□ -0.89
LEMD3-204ENST00000542032 PRR20CP86479 221 aa9.47□□□□□ -0.89
LEMD3-204ENST00000542032 PRR20DP86480 221 aa9.47□□□□□ -0.89
LEMD3-204ENST00000542032 PRR20BP86481 221 aa9.47□□□□□ -0.89
LEMD3-204ENST00000542032 PRR20AP86496 221 aa9.47□□□□□ -0.89
LEMD3-204ENST00000542032 PTGDRQ13258 359 aa9.46□□□□□ -0.9
LEMD3-204ENST00000542032 EMID1Q96A84 441 aaPredicted RBP9.46□□□□□ -0.9
LEMD3-204ENST00000542032 SAMD7Q7Z3H4 446 aa9.45□□□□□ -0.9
LEMD3-204ENST00000542032 TMUB1Q9BVT8 246 aa9.45□□□□□ -0.9
LEMD3-204ENST00000542032 C3orf80F5H4A9 247 aa9.44□□□□□ -0.9
LEMD3-204ENST00000542032 TNFRSF10AO00220 468 aa9.44□□□□□ -0.9
LEMD3-204ENST00000542032 LCE2CQ5TA81 110 aa9.44□□□□□ -0.9
LEMD3-204ENST00000542032 SMYD5Q6GMV2 418 aa9.44□□□□□ -0.9
LEMD3-204ENST00000542032 DACH1Q9UI36 760 aa9.44□□□□□ -0.9
LEMD3-204ENST00000542032 SPRYD7Q5W111 196 aa9.43□□□□□ -0.9
LEMD3-204ENST00000542032 PACS2Q86VP3 889 aa9.43□□□□□ -0.9
LEMD3-204ENST00000542032 C11orf95C9JLR9 678 aaPredicted RBP9.42□□□□□ -0.9
LEMD3-204ENST00000542032 RBM26Q5T8P6 1007 aaKnown RBP9.42□□□□□ -0.9
LEMD3-204ENST00000542032 ZNF598Q86UK7 904 aaKnown RBP9.42□□□□□ -0.9
LEMD3-204ENST00000542032 PADI6Q6TGC4 694 aa9.41□□□□□ -0.9
LEMD3-204ENST00000542032 GMPR2Q9P2T1 348 aaKnown RBP9.41□□□□□ -0.9
LEMD3-204ENST00000542032 GPR37O15354 613 aa9.4□□□□□ -0.9
LEMD3-204ENST00000542032 NUTM2FA1L443 756 aa9.39□□□□□ -0.91
LEMD3-204ENST00000542032 APLP1P51693 650 aa9.39□□□□□ -0.91
LEMD3-204ENST00000542032 COPS2P61201 443 aa9.39□□□□□ -0.91
LEMD3-204ENST00000542032 TATDN2Q93075 761 aa9.39□□□□□ -0.91
LEMD3-204ENST00000542032 NBPF26B4DH59 902 aa9.38□□□□□ -0.91
LEMD3-204ENST00000542032 FCHSD2O94868 740 aa9.38□□□□□ -0.91
LEMD3-204ENST00000542032 ZNF697Q5TEC3 545 aa9.38□□□□□ -0.91
LEMD3-204ENST00000542032 FAM181BA6NEQ2 426 aa9.37□□□□□ -0.91
LEMD3-204ENST00000542032 RNF223E7ERA6 249 aa9.37□□□□□ -0.91
LEMD3-204ENST00000542032 SMAPO00193 183 aa9.37□□□□□ -0.91
LEMD3-204ENST00000542032 GDF9O60383 454 aa9.37□□□□□ -0.91
LEMD3-204ENST00000542032 NUDT18Q6ZVK8 323 aa9.37□□□□□ -0.91
LEMD3-204ENST00000542032 PNMA3Q9UL41 463 aa9.37□□□□□ -0.91
LEMD3-204ENST00000542032 HIC1Q14526 733 aa9.36□□□□□ -0.91
LEMD3-204ENST00000542032 EYA1Q99502 592 aa9.36□□□□□ -0.91
LEMD3-204ENST00000542032 RNF40O75150 1001 aa9.35□□□□□ -0.91
LEMD3-204ENST00000542032 ADGRG1Q9Y653 693 aa9.33□□□□□ -0.92
LEMD3-204ENST00000542032 GNPATO15228 680 aa9.32□□□□□ -0.92
LEMD3-204ENST00000542032 LIAT1Q6ZQX7 453 aa9.31□□□□□ -0.92
LEMD3-204ENST00000542032 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.31□□□□□ -0.92
LEMD3-204ENST00000542032 FECHP22830 423 aa9.3□□□□□ -0.92
LEMD3-204ENST00000542032 GPIHBP1Q8IV16 184 aa9.3□□□□□ -0.92
LEMD3-204ENST00000542032 CRIPAKQ8N1N5 446 aa9.3□□□□□ -0.92
LEMD3-204ENST00000542032 TERTO14746 1132 aaKnown RBP9.29□□□□□ -0.92
LEMD3-204ENST00000542032 SLC24A1O60721 1099 aa9.29□□□□□ -0.92
LEMD3-204ENST00000542032 ZPR1O75312 459 aa9.29□□□□□ -0.92
LEMD3-204ENST00000542032 TULP1O00294 542 aaPredicted RBP9.28□□□□□ -0.92
LEMD3-204ENST00000542032 PPEF1O14829 653 aaPredicted RBP9.27□□□□□ -0.93
LEMD3-204ENST00000542032 FAM161AQ3B820 660 aa9.27□□□□□ -0.93
LEMD3-204ENST00000542032 RBM46Q8TBY0 533 aaKnown RBP9.27□□□□□ -0.93
LEMD3-204ENST00000542032 AXIN1O15169 862 aa9.26□□□□□ -0.93
LEMD3-204ENST00000542032 PXYLP1Q8TE99 480 aa9.26□□□□□ -0.93
LEMD3-204ENST00000542032 DNAJB2P25686 324 aa9.25□□□□□ -0.93
LEMD3-204ENST00000542032 SWT1Q5T5J6 900 aaKnown RBP9.25□□□□□ -0.93
LEMD3-204ENST00000542032 TMEM134Q9H6X4 195 aa9.25□□□□□ -0.93
LEMD3-204ENST00000542032 RCCD1A6NED2 376 aa9.24□□□□□ -0.93
LEMD3-204ENST00000542032 OATP04181 439 aa9.24□□□□□ -0.93
LEMD3-204ENST00000542032 METTL3Q86U44 580 aaKnown RBP9.24□□□□□ -0.93
LEMD3-204ENST00000542032 ANKLE1Q8NAG6 615 aa9.24□□□□□ -0.93
LEMD3-204ENST00000542032 LMOD2Q6P5Q4 547 aa9.23□□□□□ -0.93
LEMD3-204ENST00000542032 ZSCAN1Q8NBB4 408 aa9.23□□□□□ -0.93
LEMD3-204ENST00000542032 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.22□□□□□ -0.93
LEMD3-204ENST00000542032 LORP23490 312 aaPredicted RBP9.22□□□□□ -0.93
LEMD3-204ENST00000542032 AVPP01185 164 aa9.21□□□□□ -0.94
LEMD3-204ENST00000542032 SNRPBP14678 240 aaKnown RBP9.21□□□□□ -0.94
LEMD3-204ENST00000542032 HDGFP51858 240 aaKnown RBP9.21□□□□□ -0.94
LEMD3-204ENST00000542032 FOXC1Q12948 553 aa9.21□□□□□ -0.94
LEMD3-204ENST00000542032 SLF2Q8IX21 1173 aa9.21□□□□□ -0.94
LEMD3-204ENST00000542032 MAP2K5Q13163 448 aa9.2□□□□□ -0.94
LEMD3-204ENST00000542032 TLL1O43897 1013 aa9.19□□□□□ -0.94
LEMD3-204ENST00000542032 PKD2L1Q9P0L9 805 aa9.19□□□□□ -0.94
LEMD3-204ENST00000542032 PHOX2BQ99453 314 aa9.18□□□□□ -0.94
LEMD3-204ENST00000542032 IRF6O14896 467 aa9.17□□□□□ -0.94
LEMD3-204ENST00000542032 S1PR4O95977 384 aa9.17□□□□□ -0.94
LEMD3-204ENST00000542032 CTC1Q2NKJ3 1217 aa9.17□□□□□ -0.94
LEMD3-204ENST00000542032 NECTIN2Q92692 538 aa9.17□□□□□ -0.94
LEMD3-204ENST00000542032 MINK1Q8N4C8 1332 aaPredicted RBP9.16□□□□□ -0.94
LEMD3-204ENST00000542032 KCTD17Q8N5Z5 321 aa9.16□□□□□ -0.94
LEMD3-204ENST00000542032 ZMYND10O75800 440 aa9.15□□□□□ -0.94
LEMD3-204ENST00000542032 SLC10A3P09131 477 aa9.14□□□□□ -0.95
LEMD3-204ENST00000542032 GMPRP36959 345 aa9.14□□□□□ -0.95
LEMD3-204ENST00000542032 PLA2G2CQ5R387 149 aa9.14□□□□□ -0.95
LEMD3-204ENST00000542032 BLOC1S3Q6QNY0 202 aa9.14□□□□□ -0.95
LEMD3-204ENST00000542032 BARGINQ6ZT62 677 aa9.14□□□□□ -0.95
LEMD3-204ENST00000542032 ZC3H15Q8WU90 426 aaKnown RBP9.14□□□□□ -0.95
LEMD3-204ENST00000542032 DAXXQ9UER7 740 aaPredicted RBP9.14□□□□□ -0.95
LEMD3-204ENST00000542032 PCDHB3Q9Y5E6 796 aa9.14□□□□□ -0.95
LEMD3-204ENST00000542032 SLC4A3P48751 1232 aa9.13□□□□□ -0.95
LEMD3-204ENST00000542032 SMCPP49901 116 aaPredicted RBP9.12□□□□□ -0.95
LEMD3-204ENST00000542032 NLRP7Q8WX94 980 aa9.11□□□□□ -0.95
LEMD3-204ENST00000542032 CCDC102AQ96A19 550 aa9.11□□□□□ -0.95
LEMD3-204ENST00000542032 TOR4AQ9NXH8 423 aa9.11□□□□□ -0.95
LEMD3-204ENST00000542032 ATP13A2Q9NQ11 1180 aa9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms