RNA–Protein interactions for RNA: ENST00000542029.1

VTN-203, Transcript of vitronectin, humanhuman

TSL 3

Gene VTN, Length 501 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTN-203ENST00000542029 PROSER2Q86WR7 435 aaPredicted RBP17.25■□□□□ 0.35
VTN-203ENST00000542029 ZFYVE9O95405 1425 aa17.24■□□□□ 0.35
VTN-203ENST00000542029 TBX22Q9Y458 520 aa17.24■□□□□ 0.35
VTN-203ENST00000542029 TMEM94Q12767 1356 aa17.24■□□□□ 0.35
VTN-203ENST00000542029 ILDR2Q71H61 639 aa17.22■□□□□ 0.35
VTN-203ENST00000542029 IQGAP3Q86VI3 1631 aa17.21■□□□□ 0.35
VTN-203ENST00000542029 NKTRP30414 1462 aaKnown RBP17.2■□□□□ 0.34
VTN-203ENST00000542029 GCC2Q8IWJ2 1684 aa17.19■□□□□ 0.34
VTN-203ENST00000542029 ALKQ9UM73 1620 aa17.18■□□□□ 0.34
VTN-203ENST00000542029 STRCP1A6NGW2 1772 aa17.18■□□□□ 0.34
VTN-203ENST00000542029 SOCS7O14512 581 aa17.18■□□□□ 0.34
VTN-203ENST00000542029 FAM135BQ49AJ0 1406 aa17.18■□□□□ 0.34
VTN-203ENST00000542029 PIK3R4Q99570 1358 aa17.17■□□□□ 0.34
VTN-203ENST00000542029 NAIPQ13075 1403 aa17.17■□□□□ 0.34
VTN-203ENST00000542029 MSH6P52701 1360 aa17.16■□□□□ 0.34
VTN-203ENST00000542029 TMEM131LA2VDJ0 1609 aa17.16■□□□□ 0.34
VTN-203ENST00000542029 NCOA3Q9Y6Q9 1424 aa17.15■□□□□ 0.34
VTN-203ENST00000542029 E9PCH4 1651 aa17.14■□□□□ 0.33
VTN-203ENST00000542029 NUTM2DQ5VT03 806 aaPredicted RBP17.14■□□□□ 0.33
VTN-203ENST00000542029 TRIM52Q96A61 297 aa17.14■□□□□ 0.33
VTN-203ENST00000542029 HFM1A2PYH4 1435 aa17.13■□□□□ 0.33
VTN-203ENST00000542029 ZNF326Q5BKZ1 582 aaKnown RBP17.13■□□□□ 0.33
VTN-203ENST00000542029 SENP3Q9H4L4 574 aaPredicted RBP17.13■□□□□ 0.33
VTN-203ENST00000542029 ADAMTS13Q76LX8 1427 aa17.13■□□□□ 0.33
VTN-203ENST00000542029 NWD1Q149M9 1564 aa17.12■□□□□ 0.33
VTN-203ENST00000542029 RBM33Q96EV2 1170 aaKnown RBP17.12■□□□□ 0.33
VTN-203ENST00000542029 PHF23Q9BUL5 403 aaPredicted RBP17.12■□□□□ 0.33
VTN-203ENST00000542029 SLAIN2Q9P270 581 aa17.11■□□□□ 0.33
VTN-203ENST00000542029 C14orf37Q86TY3 774 aa17.1■□□□□ 0.33
VTN-203ENST00000542029 SLC4A1APQ9BWU0 796 aaKnown RBP17.1■□□□□ 0.33
VTN-203ENST00000542029 CADPS2Q86UW7 1296 aa17.09■□□□□ 0.33
VTN-203ENST00000542029 C19orf44Q9H6X5 657 aa17.09■□□□□ 0.33
VTN-203ENST00000542029 AMOTL2Q9Y2J4 779 aa17.09■□□□□ 0.33
VTN-203ENST00000542029 DIP2AQ14689 1571 aa17.09■□□□□ 0.33
VTN-203ENST00000542029 ACIN1Q9UKV3 1341 aaKnown RBP17.08■□□□□ 0.32
VTN-203ENST00000542029 MED1Q15648 1581 aaPredicted RBP17.07■□□□□ 0.32
VTN-203ENST00000542029 VGFO15240 615 aaPredicted RBP17.06■□□□□ 0.32
VTN-203ENST00000542029 ATF3P18847 181 aa17.06■□□□□ 0.32
VTN-203ENST00000542029 RPGRIP1LQ68CZ1 1315 aa17.05■□□□□ 0.32
VTN-203ENST00000542029 TRPM2O94759 1503 aa17.04■□□□□ 0.32
VTN-203ENST00000542029 XIRP1Q702N8 1843 aaKnown RBP17.01■□□□□ 0.31
VTN-203ENST00000542029 SETBP1Q9Y6X0 1596 aa17.01■□□□□ 0.31
VTN-203ENST00000542029 CHD2O14647 1828 aaKnown RBP17■□□□□ 0.31
VTN-203ENST00000542029 MYO5BQ9ULV0 1848 aa17■□□□□ 0.31
VTN-203ENST00000542029 SPHKAPQ2M3C7 1700 aa17■□□□□ 0.31
VTN-203ENST00000542029 PTPRUQ92729 1446 aa17■□□□□ 0.31
VTN-203ENST00000542029 METP08581 1390 aa16.99■□□□□ 0.31
VTN-203ENST00000542029 DCCP43146 1447 aa16.98■□□□□ 0.31
VTN-203ENST00000542029 JCADQ9P266 1359 aa16.98■□□□□ 0.31
VTN-203ENST00000542029 MPHOSPH9Q99550 1183 aa16.96■□□□□ 0.31
VTN-203ENST00000542029 CLTCL1P53675 1640 aa16.96■□□□□ 0.3
VTN-203ENST00000542029 ROBO1Q9Y6N7 1651 aa16.95■□□□□ 0.3
VTN-203ENST00000542029 NEXMIFQ5QGS0 1516 aa16.95■□□□□ 0.3
VTN-203ENST00000542029 CCDC144AA2RUR9 1427 aa16.94■□□□□ 0.3
VTN-203ENST00000542029 FOXD1Q16676 465 aa16.92■□□□□ 0.3
VTN-203ENST00000542029 BRINP3Q76B58 766 aa16.92■□□□□ 0.3
VTN-203ENST00000542029 RGS17Q9UGC6 210 aaPredicted RBP16.92■□□□□ 0.3
VTN-203ENST00000542029 SPATA31A6Q5VVP1 1343 aa16.92■□□□□ 0.3
VTN-203ENST00000542029 NRXN3Q9Y4C0 1643 aa16.91■□□□□ 0.3
VTN-203ENST00000542029 ANKRD30BQ9BXX2 1392 aa16.9■□□□□ 0.3
VTN-203ENST00000542029 ADGRL3Q9HAR2 1447 aa16.9■□□□□ 0.3
VTN-203ENST00000542029 PTCH1Q13635 1447 aa16.89■□□□□ 0.29
VTN-203ENST00000542029 SETD5Q9C0A6 1442 aa16.89■□□□□ 0.29
VTN-203ENST00000542029 XRN1Q8IZH2 1706 aaKnown RBP16.88■□□□□ 0.29
VTN-203ENST00000542029 RGL3Q3MIN7 710 aa16.88■□□□□ 0.29
VTN-203ENST00000542029 PRAG1Q86YV5 1406 aa16.87■□□□□ 0.29
VTN-203ENST00000542029 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.87■□□□□ 0.29
VTN-203ENST00000542029 MST1RQ04912 1400 aa16.87■□□□□ 0.29
VTN-203ENST00000542029 KIF1BO60333 1816 aa16.86■□□□□ 0.29
VTN-203ENST00000542029 AHDC1Q5TGY3 1603 aaPredicted RBP16.86■□□□□ 0.29
VTN-203ENST00000542029 LRRC59Q96AG4 307 aaKnown RBP16.86■□□□□ 0.29
VTN-203ENST00000542029 ROBO2Q9HCK4 1378 aa16.86■□□□□ 0.29
VTN-203ENST00000542029 SPATA31E1Q6ZUB1 1445 aa16.86■□□□□ 0.29
VTN-203ENST00000542029 ADGRF5Q8IZF2 1346 aa16.85■□□□□ 0.29
VTN-203ENST00000542029 MEX3CQ5U5Q3 659 aaKnown RBP16.84■□□□□ 0.29
VTN-203ENST00000542029 PHLPP1O60346 1717 aa16.83■□□□□ 0.28
VTN-203ENST00000542029 POTEAQ6S8J7 498 aa16.83■□□□□ 0.28
VTN-203ENST00000542029 COL16A1Q07092 1604 aaPredicted RBP16.82■□□□□ 0.28
VTN-203ENST00000542029 ZNF772Q68DY9 489 aaPredicted RBP16.82■□□□□ 0.28
VTN-203ENST00000542029 ASXL1Q8IXJ9 1541 aa16.81■□□□□ 0.28
VTN-203ENST00000542029 HRCP23327 699 aa16.81■□□□□ 0.28
VTN-203ENST00000542029 C1orf167Q5SNV9 1468 aa16.8■□□□□ 0.28
VTN-203ENST00000542029 ABCC11Q96J66 1382 aa16.8■□□□□ 0.28
VTN-203ENST00000542029 RAB3GAP2Q9H2M9 1393 aa16.8■□□□□ 0.28
VTN-203ENST00000542029 LRPPRCP42704 1394 aaKnown RBP16.79■□□□□ 0.28
VTN-203ENST00000542029 TECPR2O15040 1411 aa16.78■□□□□ 0.28
VTN-203ENST00000542029 NUTM2BA6NNL0 878 aaPredicted RBP16.77■□□□□ 0.28
VTN-203ENST00000542029 NUTM2EB1AL46 878 aaPredicted RBP16.77■□□□□ 0.28
VTN-203ENST00000542029 NUTM2AQ8IVF1 878 aaPredicted RBP16.77■□□□□ 0.28
VTN-203ENST00000542029 SIRT1Q96EB6 747 aa16.77■□□□□ 0.28
VTN-203ENST00000542029 C14orf93Q9H972 538 aaKnown RBP16.77■□□□□ 0.28
VTN-203ENST00000542029 STK26Q9P289 416 aa16.77■□□□□ 0.28
VTN-203ENST00000542029 PIK3C2GO75747 1445 aa16.77■□□□□ 0.27
VTN-203ENST00000542029 STAC3Q96MF2 364 aa16.76■□□□□ 0.27
VTN-203ENST00000542029 ORAI2Q96SN7 254 aa16.76■□□□□ 0.27
VTN-203ENST00000542029 SOS2Q07890 1332 aaPredicted RBP16.75■□□□□ 0.27
VTN-203ENST00000542029 TMEM132EQ6IEE7 984 aa16.75■□□□□ 0.27
VTN-203ENST00000542029 PPLO60437 1756 aa16.74■□□□□ 0.27
VTN-203ENST00000542029 LRP6O75581 1613 aa16.74■□□□□ 0.27
VTN-203ENST00000542029 DDX17Q92841 729 aaKnown RBP16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms