RNA–Protein interactions for RNA: ENST00000541982.5

CD4-210, Transcript of CD4 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD4, Length 1,187 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD4-210ENST00000541982 FGD6Q6ZV73 1430 aa24.28■■□□□ 1.48
CD4-210ENST00000541982 CHIC2Q9UKJ5 165 aa24.28■■□□□ 1.48
CD4-210ENST00000541982 HDGFP51858 240 aaKnown RBP24.27■■□□□ 1.48
CD4-210ENST00000541982 SLAIN2Q9P270 581 aa24.27■■□□□ 1.48
CD4-210ENST00000541982 PHLPP1O60346 1717 aa24.27■■□□□ 1.48
CD4-210ENST00000541982 JCADQ9P266 1359 aa24.26■■□□□ 1.47
CD4-210ENST00000541982 RPRD2Q5VT52 1461 aaKnown RBP24.24■■□□□ 1.47
CD4-210ENST00000541982 CHD2O14647 1828 aaKnown RBP24.23■■□□□ 1.47
CD4-210ENST00000541982 PLEKHG1Q9ULL1 1385 aa24.22■■□□□ 1.47
CD4-210ENST00000541982 PPP1R15AO75807 674 aaPredicted RBP24.21■■□□□ 1.47
CD4-210ENST00000541982 NCOA3Q9Y6Q9 1424 aa24.19■■□□□ 1.46
CD4-210ENST00000541982 ADGRL2O95490 1459 aa24.19■■□□□ 1.46
CD4-210ENST00000541982 ZFYVE9O95405 1425 aa24.18■■□□□ 1.46
CD4-210ENST00000541982 MYO5BQ9ULV0 1848 aa24.17■■□□□ 1.46
CD4-210ENST00000541982 RIMS2Q9UQ26 1411 aa24.17■■□□□ 1.46
CD4-210ENST00000541982 TBX22Q9Y458 520 aa24.16■■□□□ 1.46
CD4-210ENST00000541982 GCC2Q8IWJ2 1684 aa24.15■■□□□ 1.46
CD4-210ENST00000541982 ABCF1Q8NE71 845 aaKnown RBP eCLIP24.15■■□□□ 1.46
CD4-210ENST00000541982 SPATA31A6Q5VVP1 1343 aa24.14■■□□□ 1.46
CD4-210ENST00000541982 SETD1AO15047 1707 aaKnown RBP24.14■■□□□ 1.45
CD4-210ENST00000541982 C14orf37Q86TY3 774 aa24.14■■□□□ 1.45
CD4-210ENST00000541982 ANKRD50Q9ULJ7 1429 aa24.14■■□□□ 1.45
CD4-210ENST00000541982 COL16A1Q07092 1604 aaPredicted RBP24.13■■□□□ 1.45
CD4-210ENST00000541982 TMEM131LA2VDJ0 1609 aa24.13■■□□□ 1.45
CD4-210ENST00000541982 MEX3CQ5U5Q3 659 aaKnown RBP24.11■■□□□ 1.45
CD4-210ENST00000541982 ZNF772Q68DY9 489 aaPredicted RBP24.11■■□□□ 1.45
CD4-210ENST00000541982 CADPS2Q86UW7 1296 aa24.11■■□□□ 1.45
CD4-210ENST00000541982 ATF3P18847 181 aa24.09■■□□□ 1.45
CD4-210ENST00000541982 C19orf44Q9H6X5 657 aa24.09■■□□□ 1.45
CD4-210ENST00000541982 DIP2AQ14689 1571 aa24.08■■□□□ 1.45
CD4-210ENST00000541982 PIK3R4Q99570 1358 aa24.08■■□□□ 1.45
CD4-210ENST00000541982 CHGAP10645 457 aaKnown RBP24.08■■□□□ 1.45
CD4-210ENST00000541982 FAM50AQ14320 339 aaKnown RBP24.08■■□□□ 1.45
CD4-210ENST00000541982 AHDC1Q5TGY3 1603 aaPredicted RBP24.06■■□□□ 1.44
CD4-210ENST00000541982 SIPA1L2Q9P2F8 1722 aaPredicted RBP24.06■■□□□ 1.44
CD4-210ENST00000541982 LRP6O75581 1613 aa24.05■■□□□ 1.44
CD4-210ENST00000541982 SHPRHQ149N8 1683 aa24.05■■□□□ 1.44
CD4-210ENST00000541982 ADAMTS13Q76LX8 1427 aa24.03■■□□□ 1.44
CD4-210ENST00000541982 UNC13BO14795 1591 aa24.02■■□□□ 1.44
CD4-210ENST00000541982 UPF1Q92900 1129 aaKnown RBP eCLIP24.01■■□□□ 1.43
CD4-210ENST00000541982 TRIM52Q96A61 297 aa24■■□□□ 1.43
CD4-210ENST00000541982 TRPM2O94759 1503 aa24■■□□□ 1.43
CD4-210ENST00000541982 NUTM2DQ5VT03 806 aaPredicted RBP23.99■■□□□ 1.43
CD4-210ENST00000541982 E9PCH4 1651 aa23.99■■□□□ 1.43
CD4-210ENST00000541982 RXRBP28702 533 aa23.98■■□□□ 1.43
CD4-210ENST00000541982 AMOTL2Q9Y2J4 779 aa23.98■■□□□ 1.43
CD4-210ENST00000541982 BRINP3Q76B58 766 aa23.96■■□□□ 1.43
CD4-210ENST00000541982 DCCP43146 1447 aa23.95■■□□□ 1.42
CD4-210ENST00000541982 IQGAP3Q86VI3 1631 aa23.94■■□□□ 1.42
CD4-210ENST00000541982 CDK12Q9NYV4 1490 aaPredicted RBP23.94■■□□□ 1.42
CD4-210ENST00000541982 NUTM2BA6NNL0 878 aaPredicted RBP23.92■■□□□ 1.42
CD4-210ENST00000541982 NUTM2EB1AL46 878 aaPredicted RBP23.92■■□□□ 1.42
CD4-210ENST00000541982 NUTM2AQ8IVF1 878 aaPredicted RBP23.92■■□□□ 1.42
CD4-210ENST00000541982 ROCK1Q13464 1354 aa23.91■■□□□ 1.42
CD4-210ENST00000541982 PTPRUQ92729 1446 aa23.91■■□□□ 1.42
CD4-210ENST00000541982 SETD5Q9C0A6 1442 aa23.89■■□□□ 1.41
CD4-210ENST00000541982 ASXL1Q8IXJ9 1541 aa23.89■■□□□ 1.41
CD4-210ENST00000541982 LRRC59Q96AG4 307 aaKnown RBP23.88■■□□□ 1.41
CD4-210ENST00000541982 AFF2P51816 1311 aa23.87■■□□□ 1.41
CD4-210ENST00000541982 NUP155O75694 1391 aa23.87■■□□□ 1.41
CD4-210ENST00000541982 NHSL1Q5SYE7 1610 aa23.86■■□□□ 1.41
CD4-210ENST00000541982 XRN1Q8IZH2 1706 aaKnown RBP23.86■■□□□ 1.41
CD4-210ENST00000541982 SETBP1Q9Y6X0 1596 aa23.85■■□□□ 1.41
CD4-210ENST00000541982 MST1RQ04912 1400 aa23.84■■□□□ 1.41
CD4-210ENST00000541982 NRXN3Q9Y4C0 1643 aa23.82■■□□□ 1.4
CD4-210ENST00000541982 ZNF326Q5BKZ1 582 aaKnown RBP23.81■■□□□ 1.4
CD4-210ENST00000541982 RBM6P78332 1123 aaKnown RBP23.8■■□□□ 1.4
CD4-210ENST00000541982 SPHKAPQ2M3C7 1700 aa23.79■■□□□ 1.4
CD4-210ENST00000541982 C8orf37Q96NL8 207 aa23.79■■□□□ 1.4
CD4-210ENST00000541982 QTRT2Q9H974 415 aaKnown RBP23.79■■□□□ 1.4
CD4-210ENST00000541982 ADGRL3Q9HAR2 1447 aa23.78■■□□□ 1.4
CD4-210ENST00000541982 METP08581 1390 aa23.77■■□□□ 1.4
CD4-210ENST00000541982 PNPLA6Q8IY17 1366 aa23.77■■□□□ 1.4
CD4-210ENST00000541982 RGS12O14924 1447 aa23.74■■□□□ 1.39
CD4-210ENST00000541982 NGLY1Q96IV0 654 aa23.73■■□□□ 1.39
CD4-210ENST00000541982 NALCNQ8IZF0 1738 aa23.72■■□□□ 1.39
CD4-210ENST00000541982 ITGAEP38570 1179 aa23.71■■□□□ 1.39
CD4-210ENST00000541982 DDX17Q92841 729 aaKnown RBP23.71■■□□□ 1.39
CD4-210ENST00000541982 C1orf167Q5SNV9 1468 aa23.68■■□□□ 1.38
CD4-210ENST00000541982 ADAMTS2O95450 1211 aa23.68■■□□□ 1.38
CD4-210ENST00000541982 NEXMIFQ5QGS0 1516 aa23.68■■□□□ 1.38
CD4-210ENST00000541982 LAMC1P11047 1609 aa23.67■■□□□ 1.38
CD4-210ENST00000541982 KIF1BO60333 1816 aa23.67■■□□□ 1.38
CD4-210ENST00000541982 FOXD1Q16676 465 aa23.66■■□□□ 1.38
CD4-210ENST00000541982 ATAD2Q6PL18 1390 aa23.65■■□□□ 1.38
CD4-210ENST00000541982 PTCH1Q13635 1447 aa23.65■■□□□ 1.38
CD4-210ENST00000541982 SOS2Q07890 1332 aaPredicted RBP23.64■■□□□ 1.38
CD4-210ENST00000541982 CLTCL1P53675 1640 aa23.64■■□□□ 1.38
CD4-210ENST00000541982 USP21Q9UK80 565 aa23.64■■□□□ 1.37
CD4-210ENST00000541982 TRPC5Q9UL62 973 aaPredicted RBP23.64■■□□□ 1.37
CD4-210ENST00000541982 VGFO15240 615 aaPredicted RBP23.62■■□□□ 1.37
CD4-210ENST00000541982 FNBP4Q8N3X1 1017 aaPredicted RBP23.59■■□□□ 1.37
CD4-210ENST00000541982 ORAI2Q96SN7 254 aa23.59■■□□□ 1.37
CD4-210ENST00000541982 SRCAPQ6ZRS2 3230 aa23.57■■□□□ 1.36
CD4-210ENST00000541982 ROBO2Q9HCK4 1378 aa23.57■■□□□ 1.36
CD4-210ENST00000541982 PRAG1Q86YV5 1406 aa23.57■■□□□ 1.36
CD4-210ENST00000541982 HFM1A2PYH4 1435 aa23.56■■□□□ 1.36
CD4-210ENST00000541982 COL22A1Q8NFW1 1626 aaPredicted RBP23.55■■□□□ 1.36
CD4-210ENST00000541982 ZRANB1Q9UGI0 708 aa23.55■■□□□ 1.36
CD4-210ENST00000541982 RPGRIP1LQ68CZ1 1315 aa23.55■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms