RNA–Protein interactions for RNA: ENST00000541687.5

GCFC2-211, Transcript of GC-rich sequence DNA-binding factor 2, humanhuman

TSL 2 BASIC

Gene GCFC2, Length 4,318 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCFC2-211ENST00000541687 NAP1L5Q96NT1 182 aaPredicted RBP18.32■□□□□ 0.52
GCFC2-211ENST00000541687 BACH2Q9BYV9 841 aa18.32■□□□□ 0.52
GCFC2-211ENST00000541687 ZKSCAN2Q63HK3 967 aa18.31■□□□□ 0.52
GCFC2-211ENST00000541687 NUP153P49790 1475 aaKnown RBP18.3■□□□□ 0.52
GCFC2-211ENST00000541687 RUNDC1Q96C34 613 aa18.3■□□□□ 0.52
GCFC2-211ENST00000541687 SCAPERQ9BY12 1400 aa18.3■□□□□ 0.52
GCFC2-211ENST00000541687 CTTNBP2Q8WZ74 1663 aa18.3■□□□□ 0.52
GCFC2-211ENST00000541687 CASC1Q6TDU7 716 aa18.29■□□□□ 0.52
GCFC2-211ENST00000541687 CHMP4BQ9H444 224 aaKnown RBP18.28■□□□□ 0.52
GCFC2-211ENST00000541687 KIF21AQ7Z4S6 1674 aa18.28■□□□□ 0.52
GCFC2-211ENST00000541687 RIPK4P57078 832 aa18.27■□□□□ 0.52
GCFC2-211ENST00000541687 USP35Q9P2H5 1018 aa18.27■□□□□ 0.52
GCFC2-211ENST00000541687 GSE1Q14687 1217 aa18.27■□□□□ 0.51
GCFC2-211ENST00000541687 CCDC141Q6ZP82 1450 aa18.26■□□□□ 0.51
GCFC2-211ENST00000541687 ABCA5Q8WWZ7 1642 aa18.25■□□□□ 0.51
GCFC2-211ENST00000541687 NFKBIBQ15653 356 aa18.25■□□□□ 0.51
GCFC2-211ENST00000541687 DISP3Q9P2K9 1392 aa18.25■□□□□ 0.51
GCFC2-211ENST00000541687 PTMAP06454 111 aaKnown RBP18.25■□□□□ 0.51
GCFC2-211ENST00000541687 CYB5RLQ6IPT4 315 aa18.25■□□□□ 0.51
GCFC2-211ENST00000541687 DZIP1LQ8IYY4 767 aaKnown RBP18.25■□□□□ 0.51
GCFC2-211ENST00000541687 HMOX1P09601 288 aa18.24■□□□□ 0.51
GCFC2-211ENST00000541687 DNTTIP2Q5QJE6 756 aaKnown RBP18.24■□□□□ 0.51
GCFC2-211ENST00000541687 TSR2Q969E8 191 aaKnown RBP18.24■□□□□ 0.51
GCFC2-211ENST00000541687 ANKRD45Q5TZF3 282 aa18.23■□□□□ 0.51
GCFC2-211ENST00000541687 SLC4A10Q6U841 1118 aa18.23■□□□□ 0.51
GCFC2-211ENST00000541687 RTF1Q92541 710 aaKnown RBP18.23■□□□□ 0.51
GCFC2-211ENST00000541687 PLEKHH2Q8IVE3 1493 aa18.22■□□□□ 0.51
GCFC2-211ENST00000541687 STAC3Q96MF2 364 aa18.22■□□□□ 0.51
GCFC2-211ENST00000541687 DIAPH1O60610 1272 aaKnown RBP18.22■□□□□ 0.51
GCFC2-211ENST00000541687 TCOF1Q13428 1488 aaKnown RBP18.21■□□□□ 0.51
GCFC2-211ENST00000541687 MAGI3Q5TCQ9 1506 aa18.2■□□□□ 0.5
GCFC2-211ENST00000541687 CALD1Q05682 793 aaKnown RBP18.19■□□□□ 0.5
GCFC2-211ENST00000541687 LNPKQ9C0E8 428 aa18.19■□□□□ 0.5
GCFC2-211ENST00000541687 PLCB2Q00722 1185 aa18.19■□□□□ 0.5
GCFC2-211ENST00000541687 SLFN5Q08AF3 891 aa18.18■□□□□ 0.5
GCFC2-211ENST00000541687 OS9Q13438 667 aaPredicted RBP18.18■□□□□ 0.5
GCFC2-211ENST00000541687 L1TD1Q5T7N2 865 aaKnown RBP18.18■□□□□ 0.5
GCFC2-211ENST00000541687 FRAT2O75474 233 aaPredicted RBP18.17■□□□□ 0.5
GCFC2-211ENST00000541687 RAPGEF3O95398 923 aa18.17■□□□□ 0.5
GCFC2-211ENST00000541687 EXOSC9Q06265 439 aaKnown RBP18.17■□□□□ 0.5
GCFC2-211ENST00000541687 HDGFP51858 240 aaKnown RBP18.17■□□□□ 0.5
GCFC2-211ENST00000541687 ATP10BO94823 1461 aa18.17■□□□□ 0.5
GCFC2-211ENST00000541687 ADGRF5Q8IZF2 1346 aa18.17■□□□□ 0.5
GCFC2-211ENST00000541687 LTV1Q96GA3 475 aaPredicted RBP18.17■□□□□ 0.5
GCFC2-211ENST00000541687 DHX29Q7Z478 1369 aaKnown RBP18.16■□□□□ 0.5
GCFC2-211ENST00000541687 NGEFQ8N5V2 710 aa18.16■□□□□ 0.5
GCFC2-211ENST00000541687 OSCARQ8IYS5 282 aa18.16■□□□□ 0.5
GCFC2-211ENST00000541687 KIF14Q15058 1648 aa18.16■□□□□ 0.5
GCFC2-211ENST00000541687 DDX19BQ9UMR2 479 aa18.15■□□□□ 0.5
GCFC2-211ENST00000541687 WDR62O43379 1518 aa18.15■□□□□ 0.5
GCFC2-211ENST00000541687 LRRIQ1Q96JM4 1722 aa18.15■□□□□ 0.5
GCFC2-211ENST00000541687 TARBP1Q13395 1621 aaKnown RBP18.15■□□□□ 0.5
GCFC2-211ENST00000541687 RAPGEF6Q8TEU7 1601 aa18.15■□□□□ 0.5
GCFC2-211ENST00000541687 PDZRN3Q9UPQ7 1066 aa18.15■□□□□ 0.5
GCFC2-211ENST00000541687 NOL8Q76FK4 1167 aaKnown RBP18.14■□□□□ 0.49
GCFC2-211ENST00000541687 WWC1Q8IX03 1113 aa18.14■□□□□ 0.49
GCFC2-211ENST00000541687 DUSP27Q5VZP5 1158 aa18.14■□□□□ 0.49
GCFC2-211ENST00000541687 SAMD9Q5K651 1589 aa18.14■□□□□ 0.49
GCFC2-211ENST00000541687 IL27Q8NEV9 243 aa18.14■□□□□ 0.49
GCFC2-211ENST00000541687 PZPP20742 1482 aa18.13■□□□□ 0.49
GCFC2-211ENST00000541687 PRAM1Q96QH2 718 aa18.13■□□□□ 0.49
GCFC2-211ENST00000541687 GOLGA6L3A6NEY3 463 aa18.13■□□□□ 0.49
GCFC2-211ENST00000541687 A0A0G2JS52 829 aa18.12■□□□□ 0.49
GCFC2-211ENST00000541687 COG3Q96JB2 828 aa18.12■□□□□ 0.49
GCFC2-211ENST00000541687 GBP4Q96PP9 640 aa18.11■□□□□ 0.49
GCFC2-211ENST00000541687 PDE3AQ14432 1141 aa18.11■□□□□ 0.49
GCFC2-211ENST00000541687 FOXD4L5Q5VV16 416 aaPredicted RBP18.11■□□□□ 0.49
GCFC2-211ENST00000541687 NGDNQ8NEJ9 315 aaKnown RBP18.11■□□□□ 0.49
GCFC2-211ENST00000541687 FOXD4L4Q8WXT5 416 aaPredicted RBP18.11■□□□□ 0.49
GCFC2-211ENST00000541687 TESK2Q96S53 571 aa18.1■□□□□ 0.49
GCFC2-211ENST00000541687 HAP1P54257 671 aaPredicted RBP18.1■□□□□ 0.49
GCFC2-211ENST00000541687 BRPF3Q9ULD4 1205 aa18.1■□□□□ 0.49
GCFC2-211ENST00000541687 RALGAPBQ86X10 1494 aa18.09■□□□□ 0.49
GCFC2-211ENST00000541687 NECTIN2Q92692 538 aa18.09■□□□□ 0.49
GCFC2-211ENST00000541687 C1orf115Q9H7X2 142 aa18.09■□□□□ 0.49
GCFC2-211ENST00000541687 TEX14Q8IWB6 1497 aa18.09■□□□□ 0.49
GCFC2-211ENST00000541687 PRKAR2BP31323 418 aa18.09■□□□□ 0.49
GCFC2-211ENST00000541687 TAOK2Q9UL54 1235 aa18.09■□□□□ 0.49
GCFC2-211ENST00000541687 AMPHP49418 695 aa18.08■□□□□ 0.49
GCFC2-211ENST00000541687 C22orf23Q9BZE7 217 aa18.08■□□□□ 0.49
GCFC2-211ENST00000541687 KDM6BO15054 1643 aa18.08■□□□□ 0.49
GCFC2-211ENST00000541687 KCNJ4P48050 445 aa18.08■□□□□ 0.48
GCFC2-211ENST00000541687 NSD3Q9BZ95 1437 aa18.08■□□□□ 0.48
GCFC2-211ENST00000541687 TRIM6-TRIM34B2RNG4 842 aa18.08■□□□□ 0.48
GCFC2-211ENST00000541687 STK31Q9BXU1 1019 aa18.08■□□□□ 0.48
GCFC2-211ENST00000541687 CABP1Q9NZU7 370 aa18.07■□□□□ 0.48
GCFC2-211ENST00000541687 DISP1Q96F81 1524 aa18.07■□□□□ 0.48
GCFC2-211ENST00000541687 PER1O15534 1290 aaPredicted RBP18.07■□□□□ 0.48
GCFC2-211ENST00000541687 LMOD3Q0VAK6 560 aa18.07■□□□□ 0.48
GCFC2-211ENST00000541687 ADAMTS12P58397 1594 aa18.07■□□□□ 0.48
GCFC2-211ENST00000541687 KIAA0556O60303 1618 aa18.06■□□□□ 0.48
GCFC2-211ENST00000541687 NOB1Q9ULX3 412 aaKnown RBP18.06■□□□□ 0.48
GCFC2-211ENST00000541687 PBRM1Q86U86 1689 aa18.06■□□□□ 0.48
GCFC2-211ENST00000541687 PRAG1Q86YV5 1406 aa18.05■□□□□ 0.48
GCFC2-211ENST00000541687 AMER1Q5JTC6 1135 aaPredicted RBP18.05■□□□□ 0.48
GCFC2-211ENST00000541687 FAM69CQ0P6D2 419 aa18.05■□□□□ 0.48
GCFC2-211ENST00000541687 PARD3Q8TEW0 1356 aa18.04■□□□□ 0.48
GCFC2-211ENST00000541687 FOXD4L6Q3SYB3 417 aaPredicted RBP18.03■□□□□ 0.48
GCFC2-211ENST00000541687 FOXD4L3Q6VB84 417 aaPredicted RBP18.03■□□□□ 0.48
GCFC2-211ENST00000541687 KIF16BQ96L93 1317 aa18.03■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms