RNA–Protein interactions for RNA: ENST00000540865.5

SNHG1-214, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5

Gene SNHG1, Length 784 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-214ENST00000540865 FER1L4A9Z1Z3 1794 aa7.81□□□□□ -1.16
SNHG1-214ENST00000540865 NCOA1Q15788 1441 aa7.8□□□□□ -1.16
SNHG1-214ENST00000540865 PAXIP1Q6ZW49 1069 aaPredicted RBP7.79□□□□□ -1.16
SNHG1-214ENST00000540865 EFCAB3Q8N7B9 438 aa7.79□□□□□ -1.16
SNHG1-214ENST00000540865 CFAP44Q96MT7 982 aa7.79□□□□□ -1.16
SNHG1-214ENST00000540865 ESF1Q9H501 851 aaKnown RBP7.79□□□□□ -1.16
SNHG1-214ENST00000540865 ZBTB4Q9P1Z0 1013 aaPredicted RBP7.79□□□□□ -1.16
SNHG1-214ENST00000540865 SETD1BQ9UPS6 1966 aaKnown RBP7.79□□□□□ -1.16
SNHG1-214ENST00000540865 DPY19L2Q6NUT2 758 aa7.78□□□□□ -1.16
SNHG1-214ENST00000540865 AFAP1Q8N556 730 aa7.78□□□□□ -1.16
SNHG1-214ENST00000540865 ZNF518AQ6AHZ1 1483 aa7.78□□□□□ -1.16
SNHG1-214ENST00000540865 PLCB2Q00722 1185 aa7.77□□□□□ -1.17
SNHG1-214ENST00000540865 MYT1LQ9UL68 1186 aa7.77□□□□□ -1.17
SNHG1-214ENST00000540865 CNTLNQ9NXG0 1405 aa7.77□□□□□ -1.17
SNHG1-214ENST00000540865 ZNF335Q9H4Z2 1342 aaPredicted RBP7.77□□□□□ -1.17
SNHG1-214ENST00000540865 HOXB3P14651 431 aaPredicted RBP7.76□□□□□ -1.17
SNHG1-214ENST00000540865 RANGAP1P46060 587 aaPredicted RBP7.76□□□□□ -1.17
SNHG1-214ENST00000540865 CDK11AQ9UQ88 783 aaPredicted RBP7.76□□□□□ -1.17
SNHG1-214ENST00000540865 NCKAP5LQ9HCH0 1330 aa7.76□□□□□ -1.17
SNHG1-214ENST00000540865 AGLP35573 1532 aa7.75□□□□□ -1.17
SNHG1-214ENST00000540865 NPATQ14207 1427 aa7.75□□□□□ -1.17
SNHG1-214ENST00000540865 REREQ9P2R6 1566 aa7.75□□□□□ -1.17
SNHG1-214ENST00000540865 MLH3Q9UHC1 1453 aa7.75□□□□□ -1.17
SNHG1-214ENST00000540865 GTPBP6O43824 516 aaPredicted RBP7.74□□□□□ -1.17
SNHG1-214ENST00000540865 HSPA1LP34931 641 aa7.74□□□□□ -1.17
SNHG1-214ENST00000540865 SPRYD3Q8NCJ5 442 aa7.74□□□□□ -1.17
SNHG1-214ENST00000540865 MFRPQ9BY79 579 aa7.74□□□□□ -1.17
SNHG1-214ENST00000540865 PHF8Q9UPP1 1060 aa7.74□□□□□ -1.17
SNHG1-214ENST00000540865 KDM5CP41229 1560 aa7.74□□□□□ -1.17
SNHG1-214ENST00000540865 TOM1O60784 492 aa7.73□□□□□ -1.17
SNHG1-214ENST00000540865 BOLA1Q9Y3E2 137 aa7.73□□□□□ -1.17
SNHG1-214ENST00000540865 CDK13Q14004 1512 aaKnown RBP7.73□□□□□ -1.17
SNHG1-214ENST00000540865 DIP2CQ9Y2E4 1556 aa7.72□□□□□ -1.17
SNHG1-214ENST00000540865 CAMSAP1Q5T5Y3 1602 aa7.72□□□□□ -1.17
SNHG1-214ENST00000540865 G3V3G9 751 aa7.72□□□□□ -1.17
SNHG1-214ENST00000540865 PLA2R1Q13018 1463 aa7.72□□□□□ -1.17
SNHG1-214ENST00000540865 ZMYM3Q14202 1370 aa7.71□□□□□ -1.17
SNHG1-214ENST00000540865 ZNF710Q8N1W2 664 aa7.71□□□□□ -1.18
SNHG1-214ENST00000540865 RNF166Q96A37 237 aaPredicted RBP7.71□□□□□ -1.18
SNHG1-214ENST00000540865 MED1Q15648 1581 aaPredicted RBP7.71□□□□□ -1.18
SNHG1-214ENST00000540865 C3P01024 1663 aa7.7□□□□□ -1.18
SNHG1-214ENST00000540865 TCOF1Q13428 1488 aaKnown RBP7.7□□□□□ -1.18
SNHG1-214ENST00000540865 ARHGAP5Q13017 1502 aa7.7□□□□□ -1.18
SNHG1-214ENST00000540865 HOXB1P14653 301 aaPredicted RBP7.7□□□□□ -1.18
SNHG1-214ENST00000540865 HAP1P54257 671 aaPredicted RBP7.7□□□□□ -1.18
SNHG1-214ENST00000540865 PIP4K2BP78356 416 aa7.7□□□□□ -1.18
SNHG1-214ENST00000540865 FBXO22Q8NEZ5 403 aa7.7□□□□□ -1.18
SNHG1-214ENST00000540865 ATP1B4Q9UN42 357 aaPredicted RBP7.7□□□□□ -1.18
SNHG1-214ENST00000540865 ERBB3P21860 1342 aa7.7□□□□□ -1.18
SNHG1-214ENST00000540865 TROQ12816 1431 aaPredicted RBP7.69□□□□□ -1.18
SNHG1-214ENST00000540865 SOX12O15370 315 aa7.69□□□□□ -1.18
SNHG1-214ENST00000540865 MS4A4AQ96JQ5 239 aa7.69□□□□□ -1.18
SNHG1-214ENST00000540865 CLIP1P30622 1438 aa7.69□□□□□ -1.18
SNHG1-214ENST00000540865 EEA1Q15075 1411 aa7.69□□□□□ -1.18
SNHG1-214ENST00000540865 FMN1Q68DA7 1419 aa7.69□□□□□ -1.18
SNHG1-214ENST00000540865 PPP1R37O75864 691 aa7.68□□□□□ -1.18
SNHG1-214ENST00000540865 ABCA6Q8N139 1617 aa7.67□□□□□ -1.18
SNHG1-214ENST00000540865 SLC24A1O60721 1099 aa7.67□□□□□ -1.18
SNHG1-214ENST00000540865 NLRP6P59044 892 aa7.67□□□□□ -1.18
SNHG1-214ENST00000540865 DOK7Q18PE1 504 aa7.67□□□□□ -1.18
SNHG1-214ENST00000540865 VARS2Q5ST30 1063 aaKnown RBP7.67□□□□□ -1.18
SNHG1-214ENST00000540865 PTPRKQ15262 1439 aa7.67□□□□□ -1.18
SNHG1-214ENST00000540865 MYO5CQ9NQX4 1742 aa7.66□□□□□ -1.18
SNHG1-214ENST00000540865 TSHZ2Q9NRE2 1034 aa7.66□□□□□ -1.18
SNHG1-214ENST00000540865 CPS1P31327 1500 aa7.66□□□□□ -1.18
SNHG1-214ENST00000540865 KIF14Q15058 1648 aa7.66□□□□□ -1.18
SNHG1-214ENST00000540865 SPAG9O60271 1321 aaKnown RBP7.65□□□□□ -1.18
SNHG1-214ENST00000540865 ABCC1P33527 1531 aa7.64□□□□□ -1.19
SNHG1-214ENST00000540865 SHANK2Q9UPX8 1470 aa7.64□□□□□ -1.19
SNHG1-214ENST00000540865 MROH2AA6NES4 1674 aa7.63□□□□□ -1.19
SNHG1-214ENST00000540865 CEP170BQ9Y4F5 1589 aaPredicted RBP7.63□□□□□ -1.19
SNHG1-214ENST00000540865 A2ML1A8K2U0 1454 aa7.63□□□□□ -1.19
SNHG1-214ENST00000540865 GGT6Q6P531 493 aa7.63□□□□□ -1.19
SNHG1-214ENST00000540865 RIMBP2O15034 1052 aa7.62□□□□□ -1.19
SNHG1-214ENST00000540865 ANKLE2Q86XL3 938 aa7.62□□□□□ -1.19
SNHG1-214ENST00000540865 RYDENQ9NUL5 291 aaKnown RBP7.62□□□□□ -1.19
SNHG1-214ENST00000540865 RGS17Q9UGC6 210 aaPredicted RBP7.62□□□□□ -1.19
SNHG1-214ENST00000540865 ZNF142P52746 1687 aaPredicted RBP7.61□□□□□ -1.19
SNHG1-214ENST00000540865 MYO3AQ8NEV4 1616 aa7.61□□□□□ -1.19
SNHG1-214ENST00000540865 HNRNPMP52272 730 aaKnown RBP eCLIP7.61□□□□□ -1.19
SNHG1-214ENST00000540865 ZNF777Q9ULD5 760 aaPredicted RBP7.61□□□□□ -1.19
SNHG1-214ENST00000540865 SAMD9LQ8IVG5 1584 aa7.61□□□□□ -1.19
SNHG1-214ENST00000540865 KIDINS220Q9ULH0 1771 aa7.61□□□□□ -1.19
SNHG1-214ENST00000540865 A2MP01023 1474 aa7.61□□□□□ -1.19
SNHG1-214ENST00000540865 ARHGAP35Q9NRY4 1499 aa7.61□□□□□ -1.19
SNHG1-214ENST00000540865 KIAA1107Q9UPP5 1409 aa7.61□□□□□ -1.19
SNHG1-214ENST00000540865 UBTFP17480 764 aaKnown RBP7.6□□□□□ -1.19
SNHG1-214ENST00000540865 TMEM92Q6UXU6 159 aa7.6□□□□□ -1.19
SNHG1-214ENST00000540865 THEMISQ8N1K5 641 aaPredicted RBP7.6□□□□□ -1.19
SNHG1-214ENST00000540865 TNRQ92752 1358 aa7.59□□□□□ -1.19
SNHG1-214ENST00000540865 CADPS2Q86UW7 1296 aa7.59□□□□□ -1.19
SNHG1-214ENST00000540865 PREX2Q70Z35 1606 aa7.59□□□□□ -1.19
SNHG1-214ENST00000540865 PLXNC1O60486 1568 aa7.59□□□□□ -1.2
SNHG1-214ENST00000540865 CDC42BPBQ9Y5S2 1711 aa7.58□□□□□ -1.2
SNHG1-214ENST00000540865 ITSN2Q9NZM3 1697 aa7.58□□□□□ -1.2
SNHG1-214ENST00000540865 PLEKHH2Q8IVE3 1493 aa7.58□□□□□ -1.2
SNHG1-214ENST00000540865 FBXO31Q5XUX0 539 aaPredicted RBP7.58□□□□□ -1.2
SNHG1-214ENST00000540865 MICALL2Q8IY33 904 aa7.58□□□□□ -1.2
SNHG1-214ENST00000540865 DNMT1P26358 1616 aaKnown RBP7.58□□□□□ -1.2
SNHG1-214ENST00000540865 ALKQ9UM73 1620 aa7.58□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms