RNA–Protein interactions for RNA: ENST00000540848.5

LMO3-224, Transcript of LIM domain only 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene LMO3, Length 1,574 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-224ENST00000540848 MAST1Q9Y2H9 1570 aa14.41□□□□□ -0.1
LMO3-224ENST00000540848 SOX12O15370 315 aa14.41□□□□□ -0.1
LMO3-224ENST00000540848 TSPY4P0CV99 314 aa14.41□□□□□ -0.1
LMO3-224ENST00000540848 TSPY10P0CW01 314 aa14.41□□□□□ -0.1
LMO3-224ENST00000540848 BCL11BQ9C0K0 894 aaPredicted RBP14.41□□□□□ -0.1
LMO3-224ENST00000540848 ZNF777Q9ULD5 760 aaPredicted RBP14.41□□□□□ -0.1
LMO3-224ENST00000540848 KDM5DQ9BY66 1539 aa14.41□□□□□ -0.1
LMO3-224ENST00000540848 MYO5CQ9NQX4 1742 aa14.41□□□□□ -0.1
LMO3-224ENST00000540848 RPRD2Q5VT52 1461 aaKnown RBP14.41□□□□□ -0.1
LMO3-224ENST00000540848 ANKRD50Q9ULJ7 1429 aa14.41□□□□□ -0.1
LMO3-224ENST00000540848 MBD5Q9P267 1494 aa14.4□□□□□ -0.1
LMO3-224ENST00000540848 KIAA1107Q9UPP5 1409 aa14.4□□□□□ -0.1
LMO3-224ENST00000540848 SAMD9LQ8IVG5 1584 aa14.4□□□□□ -0.1
LMO3-224ENST00000540848 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP14.39□□□□□ -0.11
LMO3-224ENST00000540848 PZPP20742 1482 aa14.39□□□□□ -0.11
LMO3-224ENST00000540848 ZCCHC11Q5TAX3 1644 aaKnown RBP14.39□□□□□ -0.11
LMO3-224ENST00000540848 TTC37Q6PGP7 1564 aa14.38□□□□□ -0.11
LMO3-224ENST00000540848 ARAP3Q8WWN8 1544 aa14.38□□□□□ -0.11
LMO3-224ENST00000540848 ARHGAP5Q13017 1502 aa14.36□□□□□ -0.11
LMO3-224ENST00000540848 SNPHO15079 494 aa14.35□□□□□ -0.11
LMO3-224ENST00000540848 PCDH10Q9P2E7 1040 aa14.35□□□□□ -0.11
LMO3-224ENST00000540848 PLXNC1O60486 1568 aa14.35□□□□□ -0.11
LMO3-224ENST00000540848 STK24Q9Y6E0 443 aa14.34□□□□□ -0.11
LMO3-224ENST00000540848 KIF15Q9NS87 1388 aa14.34□□□□□ -0.11
LMO3-224ENST00000540848 MICALL2Q8IY33 904 aa14.34□□□□□ -0.11
LMO3-224ENST00000540848 FBXO22Q8NEZ5 403 aa14.34□□□□□ -0.11
LMO3-224ENST00000540848 PLCH2O75038 1416 aa14.33□□□□□ -0.11
LMO3-224ENST00000540848 TEX14Q8IWB6 1497 aa14.33□□□□□ -0.12
LMO3-224ENST00000540848 G3V3G9 751 aa14.32□□□□□ -0.12
LMO3-224ENST00000540848 TMEM92Q6UXU6 159 aa14.32□□□□□ -0.12
LMO3-224ENST00000540848 SYCP2Q9BX26 1530 aa14.31□□□□□ -0.12
LMO3-224ENST00000540848 STK25O00506 426 aa14.31□□□□□ -0.12
LMO3-224ENST00000540848 MFRPQ9BY79 579 aa14.3□□□□□ -0.12
LMO3-224ENST00000540848 TAOK2Q9UL54 1235 aa14.3□□□□□ -0.12
LMO3-224ENST00000540848 HNRNPMP52272 730 aaKnown RBP eCLIP14.3□□□□□ -0.12
LMO3-224ENST00000540848 MARVELD3Q96A59 401 aa14.3□□□□□ -0.12
LMO3-224ENST00000540848 HOXB3P14651 431 aaPredicted RBP14.29□□□□□ -0.12
LMO3-224ENST00000540848 UNC13BO14795 1591 aa14.29□□□□□ -0.12
LMO3-224ENST00000540848 NUP155O75694 1391 aa14.28□□□□□ -0.12
LMO3-224ENST00000540848 EFCAB2Q5VUJ9 269 aa14.28□□□□□ -0.12
LMO3-224ENST00000540848 CDAN1Q8IWY9 1227 aa14.28□□□□□ -0.12
LMO3-224ENST00000540848 L3MBTL2Q969R5 705 aa14.28□□□□□ -0.12
LMO3-224ENST00000540848 ABCC1P33527 1531 aa14.27□□□□□ -0.12
LMO3-224ENST00000540848 DUOX2Q9NRD8 1548 aa14.27□□□□□ -0.12
LMO3-224ENST00000540848 WDR7Q9Y4E6 1490 aa14.27□□□□□ -0.13
LMO3-224ENST00000540848 ARHGEF12Q9NZN5 1544 aa14.27□□□□□ -0.13
LMO3-224ENST00000540848 NLRP6P59044 892 aa14.26□□□□□ -0.13
LMO3-224ENST00000540848 EIF4G2P78344 907 aaKnown RBP eCLIP14.26□□□□□ -0.13
LMO3-224ENST00000540848 ERBINQ96RT1 1412 aa14.25□□□□□ -0.13
LMO3-224ENST00000540848 ABCA9Q8IUA7 1624 aa14.23□□□□□ -0.13
LMO3-224ENST00000540848 FAM135AQ9P2D6 1515 aa14.23□□□□□ -0.13
LMO3-224ENST00000540848 RTEL1-TNFRSF6BF6WH68 1400 aa14.23□□□□□ -0.13
LMO3-224ENST00000540848 DDX10Q13206 875 aaKnown RBP14.23□□□□□ -0.13
LMO3-224ENST00000540848 CCER2I3L3R5 266 aa14.22□□□□□ -0.13
LMO3-224ENST00000540848 IQGAP3Q86VI3 1631 aa14.22□□□□□ -0.13
LMO3-224ENST00000540848 MAGI2Q86UL8 1455 aa14.22□□□□□ -0.13
LMO3-224ENST00000540848 YTHDC1Q96MU7 727 aaKnown RBP14.22□□□□□ -0.13
LMO3-224ENST00000540848 UHRF1BP1Q6BDS2 1440 aa14.21□□□□□ -0.13
LMO3-224ENST00000540848 KCNH8Q96L42 1107 aa14.21□□□□□ -0.14
LMO3-224ENST00000540848 POLR1AO95602 1720 aaPredicted RBP14.2□□□□□ -0.14
LMO3-224ENST00000540848 ANP32CO43423 234 aa14.2□□□□□ -0.14
LMO3-224ENST00000540848 POTEB3A0JP26 581 aa14.19□□□□□ -0.14
LMO3-224ENST00000540848 HSPA5P11021 654 aaKnown RBP14.19□□□□□ -0.14
LMO3-224ENST00000540848 POTEBQ6S5H4 581 aa14.19□□□□□ -0.14
LMO3-224ENST00000540848 ATP10AO60312 1499 aa14.17□□□□□ -0.14
LMO3-224ENST00000540848 SPATA31E1Q6ZUB1 1445 aa14.17□□□□□ -0.14
LMO3-224ENST00000540848 RALGAPBQ86X10 1494 aa14.16□□□□□ -0.14
LMO3-224ENST00000540848 CFAP74Q9C0B2 1584 aa14.16□□□□□ -0.14
LMO3-224ENST00000540848 ZFYVE16Q7Z3T8 1539 aa14.15□□□□□ -0.14
LMO3-224ENST00000540848 EMP3P54852 163 aa14.15□□□□□ -0.14
LMO3-224ENST00000540848 FANCAO15360 1455 aa14.15□□□□□ -0.14
LMO3-224ENST00000540848 ASXL2Q76L83 1435 aa14.15□□□□□ -0.14
LMO3-224ENST00000540848 NBPF8Q3BBV2 869 aa14.14□□□□□ -0.15
LMO3-224ENST00000540848 TRAPPC8Q9Y2L5 1435 aa14.14□□□□□ -0.15
LMO3-224ENST00000540848 ARID4BQ4LE39 1312 aaPredicted RBP14.14□□□□□ -0.15
LMO3-224ENST00000540848 GTF3C3Q9Y5Q9 886 aa14.13□□□□□ -0.15
LMO3-224ENST00000540848 CCDC144AA2RUR9 1427 aa14.13□□□□□ -0.15
LMO3-224ENST00000540848 SPAG9O60271 1321 aaKnown RBP14.13□□□□□ -0.15
LMO3-224ENST00000540848 INO80Q9ULG1 1556 aaPredicted RBP14.13□□□□□ -0.15
LMO3-224ENST00000540848 HIRIP3Q9BW71 556 aaPredicted RBP14.13□□□□□ -0.15
LMO3-224ENST00000540848 WASHC2AQ641Q2 1341 aa14.12□□□□□ -0.15
LMO3-224ENST00000540848 CCDC7Q96M83 1385 aa14.12□□□□□ -0.15
LMO3-224ENST00000540848 EIF2AK4Q9P2K8 1649 aaKnown RBP14.12□□□□□ -0.15
LMO3-224ENST00000540848 CNTLNQ9NXG0 1405 aa14.12□□□□□ -0.15
LMO3-224ENST00000540848 DEPDC5O75140 1603 aa14.11□□□□□ -0.15
LMO3-224ENST00000540848 ATP7AQ04656 1500 aa14.1□□□□□ -0.15
LMO3-224ENST00000540848 KDM5CP41229 1560 aa14.1□□□□□ -0.15
LMO3-224ENST00000540848 PPP1R37O75864 691 aa14.09□□□□□ -0.15
LMO3-224ENST00000540848 HOXB1P14653 301 aaPredicted RBP14.09□□□□□ -0.15
LMO3-224ENST00000540848 DOK7Q18PE1 504 aa14.09□□□□□ -0.15
LMO3-224ENST00000540848 ADGRL1O94910 1474 aa14.09□□□□□ -0.15
LMO3-224ENST00000540848 HS6ST3Q8IZP7 471 aa14.09□□□□□ -0.15
LMO3-224ENST00000540848 HS3ST6Q96QI5 342 aa14.09□□□□□ -0.15
LMO3-224ENST00000540848 USP47Q96K76 1375 aa14.08□□□□□ -0.16
LMO3-224ENST00000540848 FAM205CA6NFA0 338 aa14.08□□□□□ -0.16
LMO3-224ENST00000540848 LAMC1P11047 1609 aa14.07□□□□□ -0.16
LMO3-224ENST00000540848 STAC3Q96MF2 364 aa14.06□□□□□ -0.16
LMO3-224ENST00000540848 ROCK2O75116 1388 aaKnown RBP14.06□□□□□ -0.16
LMO3-224ENST00000540848 PLA2R1Q13018 1463 aa14.06□□□□□ -0.16
LMO3-224ENST00000540848 ZNF518AQ6AHZ1 1483 aa14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms