RNA–Protein interactions for RNA: ENST00000540638.6

EPB41L3-204, Transcript of erythrocyte membrane protein band 4.1 like 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene EPB41L3, Length 3,370 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPB41L3-204ENST00000540638 COL17A1Q9UMD9 1497 aaPredicted RBP22.48■■□□□ 1.19
EPB41L3-204ENST00000540638 GPRASP1Q5JY77 1395 aa22.47■■□□□ 1.19
EPB41L3-204ENST00000540638 PPM1GO15355 546 aaPredicted RBP22.47■■□□□ 1.19
EPB41L3-204ENST00000540638 CABP2Q9NPB3 220 aa22.47■■□□□ 1.19
EPB41L3-204ENST00000540638 NOS1P29475 1434 aa22.47■■□□□ 1.19
EPB41L3-204ENST00000540638 CRBNQ96SW2 442 aa22.46■■□□□ 1.19
EPB41L3-204ENST00000540638 AMER1Q5JTC6 1135 aaPredicted RBP22.46■■□□□ 1.19
EPB41L3-204ENST00000540638 RTEL1-TNFRSF6BF6WH68 1400 aa22.44■■□□□ 1.18
EPB41L3-204ENST00000540638 ESF1Q9H501 851 aaKnown RBP22.44■■□□□ 1.18
EPB41L3-204ENST00000540638 MINK1Q8N4C8 1332 aaPredicted RBP22.44■■□□□ 1.18
EPB41L3-204ENST00000540638 GOLGA2Q08379 1002 aa22.44■■□□□ 1.18
EPB41L3-204ENST00000540638 NBR1Q14596 966 aa22.44■■□□□ 1.18
EPB41L3-204ENST00000540638 SCAF11Q99590 1463 aaKnown RBP22.43■■□□□ 1.18
EPB41L3-204ENST00000540638 UNC13BO14795 1591 aa22.43■■□□□ 1.18
EPB41L3-204ENST00000540638 PDE3BQ13370 1112 aa22.43■■□□□ 1.18
EPB41L3-204ENST00000540638 MSH5O43196 834 aa22.42■■□□□ 1.18
EPB41L3-204ENST00000540638 FBXO31Q5XUX0 539 aaPredicted RBP22.42■■□□□ 1.18
EPB41L3-204ENST00000540638 ANP32AP39687 249 aaKnown RBP22.42■■□□□ 1.18
EPB41L3-204ENST00000540638 PLXNC1O60486 1568 aa22.42■■□□□ 1.18
EPB41L3-204ENST00000540638 LRPPRCP42704 1394 aaKnown RBP22.42■■□□□ 1.18
EPB41L3-204ENST00000540638 ZFYVE16Q7Z3T8 1539 aa22.42■■□□□ 1.18
EPB41L3-204ENST00000540638 IQGAP3Q86VI3 1631 aa22.42■■□□□ 1.18
EPB41L3-204ENST00000540638 C20orf194Q5TEA3 1177 aa22.42■■□□□ 1.18
EPB41L3-204ENST00000540638 FRAT1Q92837 279 aaPredicted RBP22.42■■□□□ 1.18
EPB41L3-204ENST00000540638 TRPM1Q7Z4N2 1603 aa22.41■■□□□ 1.18
EPB41L3-204ENST00000540638 U2SURPO15042 1029 aaKnown RBP22.41■■□□□ 1.18
EPB41L3-204ENST00000540638 MYT1Q01538 1121 aa22.41■■□□□ 1.18
EPB41L3-204ENST00000540638 IDI1Q13907 227 aa22.41■■□□□ 1.18
EPB41L3-204ENST00000540638 CARD14Q9BXL6 1004 aa22.41■■□□□ 1.18
EPB41L3-204ENST00000540638 MAGI2Q86UL8 1455 aa22.39■■□□□ 1.17
EPB41L3-204ENST00000540638 VGFO15240 615 aaPredicted RBP22.38■■□□□ 1.17
EPB41L3-204ENST00000540638 STAC3Q96MF2 364 aa22.37■■□□□ 1.17
EPB41L3-204ENST00000540638 RGS3P49796 1198 aa22.37■■□□□ 1.17
EPB41L3-204ENST00000540638 U2AF1L5P0DN76 240 aaPredicted RBP22.36■■□□□ 1.17
EPB41L3-204ENST00000540638 U2AF1Q01081 240 aaKnown RBP eCLIP22.36■■□□□ 1.17
EPB41L3-204ENST00000540638 BCL11AQ9H165 835 aa22.36■■□□□ 1.17
EPB41L3-204ENST00000540638 BCL2L13Q9BXK5 485 aa22.36■■□□□ 1.17
EPB41L3-204ENST00000540638 ZNF518AQ6AHZ1 1483 aa22.36■■□□□ 1.17
EPB41L3-204ENST00000540638 GGNBP2Q9H3C7 697 aa22.34■■□□□ 1.17
EPB41L3-204ENST00000540638 E9PCH4 1651 aa22.34■■□□□ 1.17
EPB41L3-204ENST00000540638 MTHFSP49914 203 aa22.33■■□□□ 1.17
EPB41L3-204ENST00000540638 PRDM15P57071 1507 aaPredicted RBP22.32■■□□□ 1.16
EPB41L3-204ENST00000540638 GOLGA6L2Q8N9W4 650 aaPredicted RBP22.32■■□□□ 1.16
EPB41L3-204ENST00000540638 POLR1AO95602 1720 aaPredicted RBP22.32■■□□□ 1.16
EPB41L3-204ENST00000540638 EIF2AK4Q9P2K8 1649 aaKnown RBP22.31■■□□□ 1.16
EPB41L3-204ENST00000540638 SUGP2Q8IX01 1082 aaKnown RBP eCLIP22.31■■□□□ 1.16
EPB41L3-204ENST00000540638 CLTCL1P53675 1640 aa22.31■■□□□ 1.16
EPB41L3-204ENST00000540638 CFAP53Q96M91 514 aa22.31■■□□□ 1.16
EPB41L3-204ENST00000540638 SLC24A1O60721 1099 aa22.3■■□□□ 1.16
EPB41L3-204ENST00000540638 BCAR3O75815 825 aa22.3■■□□□ 1.16
EPB41L3-204ENST00000540638 NUTM2FA1L443 756 aa22.3■■□□□ 1.16
EPB41L3-204ENST00000540638 PLEKHH1Q9ULM0 1364 aa22.29■■□□□ 1.16
EPB41L3-204ENST00000540638 SPINK5Q9NQ38 1064 aaPredicted RBP22.29■■□□□ 1.16
EPB41L3-204ENST00000540638 NPATQ14207 1427 aa22.29■■□□□ 1.16
EPB41L3-204ENST00000540638 PRAM1Q96QH2 718 aa22.29■■□□□ 1.16
EPB41L3-204ENST00000540638 NSD3Q9BZ95 1437 aa22.29■■□□□ 1.16
EPB41L3-204ENST00000540638 C14orf93Q9H972 538 aaKnown RBP22.29■■□□□ 1.16
EPB41L3-204ENST00000540638 EVC2Q86UK5 1308 aa22.28■■□□□ 1.16
EPB41L3-204ENST00000540638 CLUAP1Q96AJ1 413 aa22.28■■□□□ 1.16
EPB41L3-204ENST00000540638 PTPRTO14522 1441 aa22.28■■□□□ 1.16
EPB41L3-204ENST00000540638 TRPM2O94759 1503 aa22.28■■□□□ 1.16
EPB41L3-204ENST00000540638 ZBTB47Q9UFB7 747 aaPredicted RBP22.26■■□□□ 1.15
EPB41L3-204ENST00000540638 CGNL1Q0VF96 1302 aa22.25■■□□□ 1.15
EPB41L3-204ENST00000540638 DMRT2Q9Y5R5 561 aa22.25■■□□□ 1.15
EPB41L3-204ENST00000540638 DUSP27Q5VZP5 1158 aa22.24■■□□□ 1.15
EPB41L3-204ENST00000540638 FBLN1P23142 703 aa22.24■■□□□ 1.15
EPB41L3-204ENST00000540638 SOX12O15370 315 aa22.24■■□□□ 1.15
EPB41L3-204ENST00000540638 LAS1LQ9Y4W2 734 aaKnown RBP22.23■■□□□ 1.15
EPB41L3-204ENST00000540638 FANCIQ9NVI1 1328 aa22.23■■□□□ 1.15
EPB41L3-204ENST00000540638 POGZQ7Z3K3 1410 aa22.22■■□□□ 1.15
EPB41L3-204ENST00000540638 TCP11L2Q8N4U5 519 aa22.22■■□□□ 1.15
EPB41L3-204ENST00000540638 RNF123Q5XPI4 1314 aa22.22■■□□□ 1.15
EPB41L3-204ENST00000540638 NOP58Q9Y2X3 529 aaKnown RBP22.22■■□□□ 1.15
EPB41L3-204ENST00000540638 YEATS2Q9ULM3 1422 aa22.21■■□□□ 1.15
EPB41L3-204ENST00000540638 PAK3O75914 559 aaPredicted RBP22.21■■□□□ 1.15
EPB41L3-204ENST00000540638 WAPLQ7Z5K2 1190 aa22.21■■□□□ 1.15
EPB41L3-204ENST00000540638 COG6Q9Y2V7 657 aa22.2■■□□□ 1.14
EPB41L3-204ENST00000540638 ASXL1Q8IXJ9 1541 aa22.2■■□□□ 1.14
EPB41L3-204ENST00000540638 DAXXQ9UER7 740 aaPredicted RBP22.2■■□□□ 1.14
EPB41L3-204ENST00000540638 PDE4AP27815 886 aa22.19■■□□□ 1.14
EPB41L3-204ENST00000540638 PANK1Q8TE04 598 aa22.19■■□□□ 1.14
EPB41L3-204ENST00000540638 SPHKAPQ2M3C7 1700 aa22.18■■□□□ 1.14
EPB41L3-204ENST00000540638 MADDQ8WXG6 1647 aa22.18■■□□□ 1.14
EPB41L3-204ENST00000540638 SLFN5Q08AF3 891 aa22.18■■□□□ 1.14
EPB41L3-204ENST00000540638 ABCA9Q8IUA7 1624 aa22.18■■□□□ 1.14
EPB41L3-204ENST00000540638 TET3O43151 1660 aa22.16■■□□□ 1.14
EPB41L3-204ENST00000540638 E9PSI1 815 aa22.16■■□□□ 1.14
EPB41L3-204ENST00000540638 PLEKHG5O94827 1062 aa22.16■■□□□ 1.14
EPB41L3-204ENST00000540638 CABP1Q9NZU7 370 aa22.16■■□□□ 1.14
EPB41L3-204ENST00000540638 ERVK-7P63135 1459 aa22.15■■□□□ 1.14
EPB41L3-204ENST00000540638 MAPK8IP3Q9UPT6 1336 aa22.15■■□□□ 1.14
EPB41L3-204ENST00000540638 SLC52A1Q9NWF4 448 aa22.15■■□□□ 1.14
EPB41L3-204ENST00000540638 TCERG1O14776 1098 aaKnown RBP22.14■■□□□ 1.13
EPB41L3-204ENST00000540638 WWC1Q8IX03 1113 aa22.14■■□□□ 1.13
EPB41L3-204ENST00000540638 HDGFL2Q7Z4V5 671 aaPredicted RBP22.13■■□□□ 1.13
EPB41L3-204ENST00000540638 TERF2IPQ9NYB0 399 aa22.13■■□□□ 1.13
EPB41L3-204ENST00000540638 ARAP3Q8WWN8 1544 aa22.13■■□□□ 1.13
EPB41L3-204ENST00000540638 RPGRIP1LQ68CZ1 1315 aa22.13■■□□□ 1.13
EPB41L3-204ENST00000540638 NEFMP07197 916 aa22.13■■□□□ 1.13
EPB41L3-204ENST00000540638 INO80Q9ULG1 1556 aaPredicted RBP22.13■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms