RNA–Protein interactions for RNA: ENST00000540434.1

TMEM258-205, Transcript of transmembrane protein 258, humanhuman

TSL 2

Gene TMEM258, Length 553 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM258-205ENST00000540434 ARHGAP31Q2M1Z3 1444 aa17.54■□□□□ 0.4
TMEM258-205ENST00000540434 MSH6P52701 1360 aa17.53■□□□□ 0.4
TMEM258-205ENST00000540434 TMEM2Q9UHN6 1383 aa17.53■□□□□ 0.4
TMEM258-205ENST00000540434 RGS12O14924 1447 aa17.51■□□□□ 0.39
TMEM258-205ENST00000540434 KDM5AP29375 1690 aaKnown RBP17.51■□□□□ 0.39
TMEM258-205ENST00000540434 ITGAEP38570 1179 aa17.5■□□□□ 0.39
TMEM258-205ENST00000540434 KIF15Q9NS87 1388 aa17.5■□□□□ 0.39
TMEM258-205ENST00000540434 CDK12Q9NYV4 1490 aaPredicted RBP17.5■□□□□ 0.39
TMEM258-205ENST00000540434 AFF2P51816 1311 aa17.49■□□□□ 0.39
TMEM258-205ENST00000540434 SETBP1Q9Y6X0 1596 aa17.49■□□□□ 0.39
TMEM258-205ENST00000540434 NUTM2DQ5VT03 806 aaPredicted RBP17.49■□□□□ 0.39
TMEM258-205ENST00000540434 RRBP1Q9P2E9 1410 aaKnown RBP17.48■□□□□ 0.39
TMEM258-205ENST00000540434 STAG3Q9UJ98 1225 aa17.48■□□□□ 0.39
TMEM258-205ENST00000540434 NWD1Q149M9 1564 aa17.48■□□□□ 0.39
TMEM258-205ENST00000540434 ADGRL2O95490 1459 aa17.47■□□□□ 0.39
TMEM258-205ENST00000540434 DUOX2Q9NRD8 1548 aa17.47■□□□□ 0.39
TMEM258-205ENST00000540434 SHPRHQ149N8 1683 aa17.46■□□□□ 0.39
TMEM258-205ENST00000540434 NKTRP30414 1462 aaKnown RBP17.46■□□□□ 0.39
TMEM258-205ENST00000540434 EFCAB6Q5THR3 1501 aa17.46■□□□□ 0.39
TMEM258-205ENST00000540434 IDI1Q13907 227 aa17.45■□□□□ 0.38
TMEM258-205ENST00000540434 BCANQ96GW7 911 aa17.45■□□□□ 0.38
TMEM258-205ENST00000540434 ANKRD30AQ9BXX3 1397 aa17.44■□□□□ 0.38
TMEM258-205ENST00000540434 CHD2O14647 1828 aaKnown RBP17.44■□□□□ 0.38
TMEM258-205ENST00000540434 QTRT2Q9H974 415 aaKnown RBP17.43■□□□□ 0.38
TMEM258-205ENST00000540434 ZRANB1Q9UGI0 708 aa17.42■□□□□ 0.38
TMEM258-205ENST00000540434 AHDC1Q5TGY3 1603 aaPredicted RBP17.41■□□□□ 0.38
TMEM258-205ENST00000540434 DIP2AQ14689 1571 aa17.4■□□□□ 0.38
TMEM258-205ENST00000540434 RBM6P78332 1123 aaKnown RBP17.4■□□□□ 0.38
TMEM258-205ENST00000540434 C8orf37Q96NL8 207 aa17.4■□□□□ 0.38
TMEM258-205ENST00000540434 ERBINQ96RT1 1412 aa17.39■□□□□ 0.38
TMEM258-205ENST00000540434 C14orf37Q86TY3 774 aa17.39■□□□□ 0.37
TMEM258-205ENST00000540434 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.39■□□□□ 0.37
TMEM258-205ENST00000540434 MYO5BQ9ULV0 1848 aa17.37■□□□□ 0.37
TMEM258-205ENST00000540434 ROCK1Q13464 1354 aa17.37■□□□□ 0.37
TMEM258-205ENST00000540434 ANKRD50Q9ULJ7 1429 aa17.37■□□□□ 0.37
TMEM258-205ENST00000540434 BRINP3Q76B58 766 aa17.36■□□□□ 0.37
TMEM258-205ENST00000540434 NOS1P29475 1434 aa17.36■□□□□ 0.37
TMEM258-205ENST00000540434 ADGRB3O60242 1522 aa17.36■□□□□ 0.37
TMEM258-205ENST00000540434 LMTK2Q8IWU2 1503 aa17.36■□□□□ 0.37
TMEM258-205ENST00000540434 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.35■□□□□ 0.37
TMEM258-205ENST00000540434 ATAD2Q6PL18 1390 aa17.33■□□□□ 0.36
TMEM258-205ENST00000540434 NCOA3Q9Y6Q9 1424 aa17.32■□□□□ 0.36
TMEM258-205ENST00000540434 ATF3P18847 181 aa17.32■□□□□ 0.36
TMEM258-205ENST00000540434 DDX17Q92841 729 aaKnown RBP17.32■□□□□ 0.36
TMEM258-205ENST00000540434 ZFYVE9O95405 1425 aa17.31■□□□□ 0.36
TMEM258-205ENST00000540434 KANK1Q14678 1352 aa17.31■□□□□ 0.36
TMEM258-205ENST00000540434 CADPS2Q86UW7 1296 aa17.31■□□□□ 0.36
TMEM258-205ENST00000540434 PLEKHG1Q9ULL1 1385 aa17.3■□□□□ 0.36
TMEM258-205ENST00000540434 SLC52A1Q9NWF4 448 aa17.3■□□□□ 0.36
TMEM258-205ENST00000540434 ADAMTS2O95450 1211 aa17.29■□□□□ 0.36
TMEM258-205ENST00000540434 C19orf44Q9H6X5 657 aa17.29■□□□□ 0.36
TMEM258-205ENST00000540434 NAIPQ13075 1403 aa17.29■□□□□ 0.36
TMEM258-205ENST00000540434 TBX22Q9Y458 520 aa17.28■□□□□ 0.36
TMEM258-205ENST00000540434 EP400Q96L91 3159 aa17.27■□□□□ 0.36
TMEM258-205ENST00000540434 NGLY1Q96IV0 654 aa17.27■□□□□ 0.36
TMEM258-205ENST00000540434 SETD5Q9C0A6 1442 aa17.27■□□□□ 0.35
TMEM258-205ENST00000540434 PPP1R15AO75807 674 aaPredicted RBP17.26■□□□□ 0.35
TMEM258-205ENST00000540434 UNC13BO14795 1591 aa17.26■□□□□ 0.35
TMEM258-205ENST00000540434 ASXL1Q8IXJ9 1541 aa17.26■□□□□ 0.35
TMEM258-205ENST00000540434 GCC2Q8IWJ2 1684 aa17.26■□□□□ 0.35
TMEM258-205ENST00000540434 TMEM131LA2VDJ0 1609 aa17.25■□□□□ 0.35
TMEM258-205ENST00000540434 RIMS2Q9UQ26 1411 aa17.25■□□□□ 0.35
TMEM258-205ENST00000540434 FOXD1Q16676 465 aa17.25■□□□□ 0.35
TMEM258-205ENST00000540434 PNPLA6Q8IY17 1366 aa17.25■□□□□ 0.35
TMEM258-205ENST00000540434 ADAMTS13Q76LX8 1427 aa17.23■□□□□ 0.35
TMEM258-205ENST00000540434 LRRC59Q96AG4 307 aaKnown RBP17.23■□□□□ 0.35
TMEM258-205ENST00000540434 USP21Q9UK80 565 aa17.22■□□□□ 0.35
TMEM258-205ENST00000540434 NHSL1Q5SYE7 1610 aa17.21■□□□□ 0.35
TMEM258-205ENST00000540434 NUP155O75694 1391 aa17.21■□□□□ 0.35
TMEM258-205ENST00000540434 HFM1A2PYH4 1435 aa17.21■□□□□ 0.34
TMEM258-205ENST00000540434 HDGFP51858 240 aaKnown RBP17.2■□□□□ 0.34
TMEM258-205ENST00000540434 PTPRUQ92729 1446 aa17.2■□□□□ 0.34
TMEM258-205ENST00000540434 RPRD2Q5VT52 1461 aaKnown RBP17.19■□□□□ 0.34
TMEM258-205ENST00000540434 IQGAP3Q86VI3 1631 aa17.19■□□□□ 0.34
TMEM258-205ENST00000540434 AMOTL2Q9Y2J4 779 aa17.19■□□□□ 0.34
TMEM258-205ENST00000540434 MST1RQ04912 1400 aa17.19■□□□□ 0.34
TMEM258-205ENST00000540434 PIK3R4Q99570 1358 aa17.18■□□□□ 0.34
TMEM258-205ENST00000540434 E9PCH4 1651 aa17.18■□□□□ 0.34
TMEM258-205ENST00000540434 DEFB132Q7Z7B7 95 aa17.18■□□□□ 0.34
TMEM258-205ENST00000540434 TRPC5Q9UL62 973 aaPredicted RBP17.18■□□□□ 0.34
TMEM258-205ENST00000540434 CHGAP10645 457 aaKnown RBP17.16■□□□□ 0.34
TMEM258-205ENST00000540434 ATRNO75882 1429 aa17.15■□□□□ 0.34
TMEM258-205ENST00000540434 CCDC125Q86Z20 511 aa17.15■□□□□ 0.34
TMEM258-205ENST00000540434 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.15■□□□□ 0.34
TMEM258-205ENST00000540434 DCCP43146 1447 aa17.13■□□□□ 0.33
TMEM258-205ENST00000540434 LRP5O75197 1615 aa17.12■□□□□ 0.33
TMEM258-205ENST00000540434 PSDA5PKW4 1024 aaPredicted RBP17.12■□□□□ 0.33
TMEM258-205ENST00000540434 FNBP4Q8N3X1 1017 aaPredicted RBP17.12■□□□□ 0.33
TMEM258-205ENST00000540434 TRPM2O94759 1503 aa17.11■□□□□ 0.33
TMEM258-205ENST00000540434 XRN1Q8IZH2 1706 aaKnown RBP17.1■□□□□ 0.33
TMEM258-205ENST00000540434 NRXN3Q9Y4C0 1643 aa17.08■□□□□ 0.32
TMEM258-205ENST00000540434 BLMP54132 1417 aaPredicted RBP17.07■□□□□ 0.32
TMEM258-205ENST00000540434 BCL9LQ86UU0 1499 aa17.05■□□□□ 0.32
TMEM258-205ENST00000540434 RAB3GAP2Q9H2M9 1393 aa17.05■□□□□ 0.32
TMEM258-205ENST00000540434 ORAI2Q96SN7 254 aa17.05■□□□□ 0.32
TMEM258-205ENST00000540434 LAMC1P11047 1609 aa17.05■□□□□ 0.32
TMEM258-205ENST00000540434 HRCP23327 699 aa17.04■□□□□ 0.32
TMEM258-205ENST00000540434 GJD4Q96KN9 370 aaPredicted RBP17.04■□□□□ 0.32
TMEM258-205ENST00000540434 SLC4A1APQ9BWU0 796 aaKnown RBP17.04■□□□□ 0.32
TMEM258-205ENST00000540434 PTCH1Q13635 1447 aa17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms