RNA–Protein interactions for RNA: ENST00000538485.6

EFCAB11-202, Transcript of EF-hand calcium binding domain 11, humanhuman

TSL 2 BASIC

Gene EFCAB11, Length 1,870 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB11-202ENST00000538485 NEXMIFQ5QGS0 1516 aa27.54■■■□□ 2
EFCAB11-202ENST00000538485 ADAMTSL3P82987 1691 aa27.54■■■□□ 2
EFCAB11-202ENST00000538485 NRXN1Q9ULB1 1477 aa27.53■■■□□ 2
EFCAB11-202ENST00000538485 STAG3Q9UJ98 1225 aa27.53■■■□□ 2
EFCAB11-202ENST00000538485 GPRASP1Q5JY77 1395 aa27.52■■■□□ 2
EFCAB11-202ENST00000538485 USP47Q96K76 1375 aa27.51■■□□□ 1.99
EFCAB11-202ENST00000538485 PLPPR3Q6T4P5 718 aa27.51■■□□□ 1.99
EFCAB11-202ENST00000538485 RIMS1Q86UR5 1692 aaKnown RBP27.51■■□□□ 1.99
EFCAB11-202ENST00000538485 A2ML1A8K2U0 1454 aa27.5■■□□□ 1.99
EFCAB11-202ENST00000538485 NUTM2DQ5VT03 806 aaPredicted RBP27.49■■□□□ 1.99
EFCAB11-202ENST00000538485 VGFO15240 615 aaPredicted RBP27.47■■□□□ 1.99
EFCAB11-202ENST00000538485 DIEXFQ68CQ4 756 aaKnown RBP27.47■■□□□ 1.99
EFCAB11-202ENST00000538485 PIK3C2GO75747 1445 aa27.46■■□□□ 1.99
EFCAB11-202ENST00000538485 KIAA1210Q9ULL0 1709 aa27.46■■□□□ 1.99
EFCAB11-202ENST00000538485 LAMC1P11047 1609 aa27.46■■□□□ 1.99
EFCAB11-202ENST00000538485 CFAP70Q5T0N1 1121 aa27.44■■□□□ 1.98
EFCAB11-202ENST00000538485 ZFYVE9O95405 1425 aa27.43■■□□□ 1.98
EFCAB11-202ENST00000538485 NLRP1Q9C000 1473 aa27.43■■□□□ 1.98
EFCAB11-202ENST00000538485 KDM5AP29375 1690 aaKnown RBP27.41■■□□□ 1.98
EFCAB11-202ENST00000538485 UBR1Q8IWV7 1749 aa27.41■■□□□ 1.98
EFCAB11-202ENST00000538485 ST20-MTHFSA0A0A6YYL1 179 aa27.38■■□□□ 1.97
EFCAB11-202ENST00000538485 C14orf93Q9H972 538 aaKnown RBP27.38■■□□□ 1.97
EFCAB11-202ENST00000538485 RIMS2Q9UQ26 1411 aa27.37■■□□□ 1.97
EFCAB11-202ENST00000538485 C11orf95C9JLR9 678 aaPredicted RBP27.36■■□□□ 1.97
EFCAB11-202ENST00000538485 MYO3AQ8NEV4 1616 aa27.34■■□□□ 1.97
EFCAB11-202ENST00000538485 WASHC2AQ641Q2 1341 aa27.34■■□□□ 1.97
EFCAB11-202ENST00000538485 IQGAP1P46940 1657 aa27.34■■□□□ 1.97
EFCAB11-202ENST00000538485 SETBP1Q9Y6X0 1596 aa27.33■■□□□ 1.96
EFCAB11-202ENST00000538485 SENP3Q9H4L4 574 aaPredicted RBP27.32■■□□□ 1.96
EFCAB11-202ENST00000538485 TMEM2Q9UHN6 1383 aa27.32■■□□□ 1.96
EFCAB11-202ENST00000538485 SCAF11Q99590 1463 aaKnown RBP27.32■■□□□ 1.96
EFCAB11-202ENST00000538485 ADGRB1O14514 1584 aa27.3■■□□□ 1.96
EFCAB11-202ENST00000538485 DDX10Q13206 875 aaKnown RBP27.3■■□□□ 1.96
EFCAB11-202ENST00000538485 PTPRMP28827 1452 aa27.29■■□□□ 1.96
EFCAB11-202ENST00000538485 ABCF1Q8NE71 845 aaKnown RBP eCLIP27.29■■□□□ 1.96
EFCAB11-202ENST00000538485 TMEM132EQ6IEE7 984 aa27.28■■□□□ 1.96
EFCAB11-202ENST00000538485 POLR1AO95602 1720 aaPredicted RBP27.27■■□□□ 1.96
EFCAB11-202ENST00000538485 CCDC7Q96M83 1385 aa27.26■■□□□ 1.96
EFCAB11-202ENST00000538485 HDGFP51858 240 aaKnown RBP27.26■■□□□ 1.95
EFCAB11-202ENST00000538485 SETD1BQ9UPS6 1966 aaKnown RBP27.26■■□□□ 1.95
EFCAB11-202ENST00000538485 KIF7Q2M1P5 1343 aa27.25■■□□□ 1.95
EFCAB11-202ENST00000538485 CEP170BQ9Y4F5 1589 aaPredicted RBP27.25■■□□□ 1.95
EFCAB11-202ENST00000538485 TESK2Q96S53 571 aa27.25■■□□□ 1.95
EFCAB11-202ENST00000538485 ALKQ9UM73 1620 aa27.23■■□□□ 1.95
EFCAB11-202ENST00000538485 THEMISQ8N1K5 641 aaPredicted RBP27.23■■□□□ 1.95
EFCAB11-202ENST00000538485 SLIT1O75093 1534 aa27.22■■□□□ 1.95
EFCAB11-202ENST00000538485 LTKP29376 864 aa27.22■■□□□ 1.95
EFCAB11-202ENST00000538485 EIF3AQ14152 1382 aaKnown RBP27.21■■□□□ 1.95
EFCAB11-202ENST00000538485 ASXL1Q8IXJ9 1541 aa27.21■■□□□ 1.95
EFCAB11-202ENST00000538485 ARHGAP23Q9P227 1491 aa27.21■■□□□ 1.95
EFCAB11-202ENST00000538485 NRXN3Q9Y4C0 1643 aa27.19■■□□□ 1.94
EFCAB11-202ENST00000538485 TRAK1Q9UPV9 953 aa27.19■■□□□ 1.94
EFCAB11-202ENST00000538485 ZNF142P52746 1687 aaPredicted RBP27.18■■□□□ 1.94
EFCAB11-202ENST00000538485 TXNDC2Q86VQ3 553 aa27.18■■□□□ 1.94
EFCAB11-202ENST00000538485 SETD1AO15047 1707 aaKnown RBP27.17■■□□□ 1.94
EFCAB11-202ENST00000538485 EID1Q9Y6B2 187 aa27.16■■□□□ 1.94
EFCAB11-202ENST00000538485 DISP3Q9P2K9 1392 aa27.13■■□□□ 1.93
EFCAB11-202ENST00000538485 PLEKHG1Q9ULL1 1385 aa27.13■■□□□ 1.93
EFCAB11-202ENST00000538485 POLR3GLQ9BT43 218 aa27.13■■□□□ 1.93
EFCAB11-202ENST00000538485 KDM4FA0A1W2PPD8 638 aa27.12■■□□□ 1.93
EFCAB11-202ENST00000538485 YTHDC2Q9H6S0 1430 aaKnown RBP27.12■■□□□ 1.93
EFCAB11-202ENST00000538485 TMF1P82094 1093 aa27.11■■□□□ 1.93
EFCAB11-202ENST00000538485 BCANQ96GW7 911 aa27.11■■□□□ 1.93
EFCAB11-202ENST00000538485 STK26Q9P289 416 aa27.11■■□□□ 1.93
EFCAB11-202ENST00000538485 ARHGEF28Q8N1W1 1705 aaKnown RBP27.1■■□□□ 1.93
EFCAB11-202ENST00000538485 MIER1Q8N108 512 aa27.1■■□□□ 1.93
EFCAB11-202ENST00000538485 CENPJQ9HC77 1338 aaPredicted RBP27.1■■□□□ 1.93
EFCAB11-202ENST00000538485 ADAMTS13Q76LX8 1427 aa27.09■■□□□ 1.93
EFCAB11-202ENST00000538485 METP08581 1390 aa27.09■■□□□ 1.93
EFCAB11-202ENST00000538485 SBNO2Q9Y2G9 1366 aa27.06■■□□□ 1.92
EFCAB11-202ENST00000538485 QRICH2Q9H0J4 1663 aa27.05■■□□□ 1.92
EFCAB11-202ENST00000538485 MED14O60244 1454 aa27.04■■□□□ 1.92
EFCAB11-202ENST00000538485 LRPPRCP42704 1394 aaKnown RBP27.03■■□□□ 1.92
EFCAB11-202ENST00000538485 SLC24A1O60721 1099 aa27.02■■□□□ 1.92
EFCAB11-202ENST00000538485 SLC26A8Q96RN1 970 aa27.02■■□□□ 1.92
EFCAB11-202ENST00000538485 ANKLE2Q86XL3 938 aa27.01■■□□□ 1.91
EFCAB11-202ENST00000538485 ABCC11Q96J66 1382 aa27■■□□□ 1.91
EFCAB11-202ENST00000538485 PRAM1Q96QH2 718 aa26.99■■□□□ 1.91
EFCAB11-202ENST00000538485 SAFB2Q14151 953 aaKnown RBP eCLIP26.98■■□□□ 1.91
EFCAB11-202ENST00000538485 DLC1Q96QB1 1528 aa26.98■■□□□ 1.91
EFCAB11-202ENST00000538485 CDCA8Q53HL2 280 aa26.98■■□□□ 1.91
EFCAB11-202ENST00000538485 TBX22Q9Y458 520 aa26.97■■□□□ 1.91
EFCAB11-202ENST00000538485 POGKQ9P215 609 aa26.96■■□□□ 1.91
EFCAB11-202ENST00000538485 TECPR2O15040 1411 aa26.93■■□□□ 1.9
EFCAB11-202ENST00000538485 DIP2AQ14689 1571 aa26.93■■□□□ 1.9
EFCAB11-202ENST00000538485 KNDC1Q76NI1 1749 aa26.93■■□□□ 1.9
EFCAB11-202ENST00000538485 WAPLQ7Z5K2 1190 aa26.93■■□□□ 1.9
EFCAB11-202ENST00000538485 PLEKHH1Q9ULM0 1364 aa26.91■■□□□ 1.9
EFCAB11-202ENST00000538485 PTPRUQ92729 1446 aa26.91■■□□□ 1.9
EFCAB11-202ENST00000538485 ANP32CO43423 234 aa26.9■■□□□ 1.9
EFCAB11-202ENST00000538485 TULP4Q9NRJ4 1543 aa26.9■■□□□ 1.9
EFCAB11-202ENST00000538485 CPS1P31327 1500 aa26.89■■□□□ 1.9
EFCAB11-202ENST00000538485 SIRT1Q96EB6 747 aa26.89■■□□□ 1.89
EFCAB11-202ENST00000538485 EVC2Q86UK5 1308 aa26.88■■□□□ 1.89
EFCAB11-202ENST00000538485 MINK1Q8N4C8 1332 aaPredicted RBP26.88■■□□□ 1.89
EFCAB11-202ENST00000538485 FAM135BQ49AJ0 1406 aa26.87■■□□□ 1.89
EFCAB11-202ENST00000538485 ROBO2Q9HCK4 1378 aa26.87■■□□□ 1.89
EFCAB11-202ENST00000538485 MYOM1P52179 1685 aa26.86■■□□□ 1.89
EFCAB11-202ENST00000538485 NCKAP5LQ9HCH0 1330 aa26.86■■□□□ 1.89
EFCAB11-202ENST00000538485 AMOTL2Q9Y2J4 779 aa26.85■■□□□ 1.89
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms