RNA–Protein interactions for RNA: ENST00000537869.5

SNHG1-205, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3 BASIC

Gene SNHG1, Length 1,038 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-205ENST00000537869 POTEEQ6S8J3 1075 aa11.35□□□□□ -0.59
SNHG1-205ENST00000537869 RIC3Q7Z5B4 369 aa11.35□□□□□ -0.59
SNHG1-205ENST00000537869 MCM6Q14566 821 aa11.34□□□□□ -0.59
SNHG1-205ENST00000537869 VARS2Q5ST30 1063 aaKnown RBP11.34□□□□□ -0.59
SNHG1-205ENST00000537869 NUTM1Q86Y26 1132 aa11.34□□□□□ -0.59
SNHG1-205ENST00000537869 CLUAP1Q96AJ1 413 aa11.34□□□□□ -0.59
SNHG1-205ENST00000537869 LHX8Q68G74 356 aa11.33□□□□□ -0.6
SNHG1-205ENST00000537869 ARHGAP33O14559 1287 aa11.32□□□□□ -0.6
SNHG1-205ENST00000537869 RDH13Q8NBN7 331 aa11.32□□□□□ -0.6
SNHG1-205ENST00000537869 AXIN2Q9Y2T1 843 aa11.32□□□□□ -0.6
SNHG1-205ENST00000537869 MOXD2PA6NHM9 499 aa11.31□□□□□ -0.6
SNHG1-205ENST00000537869 SPTLC1O15269 473 aa11.31□□□□□ -0.6
SNHG1-205ENST00000537869 UBTFP17480 764 aaKnown RBP11.31□□□□□ -0.6
SNHG1-205ENST00000537869 RFC5P40937 340 aa11.31□□□□□ -0.6
SNHG1-205ENST00000537869 DMRTA1Q5VZB9 504 aa11.31□□□□□ -0.6
SNHG1-205ENST00000537869 NDUFV2P19404 249 aa11.3□□□□□ -0.6
SNHG1-205ENST00000537869 RSBN1LQ6PCB5 846 aaPredicted RBP11.3□□□□□ -0.6
SNHG1-205ENST00000537869 RABGEF1Q9UJ41 708 aa11.3□□□□□ -0.6
SNHG1-205ENST00000537869 A6NJR5 290 aa11.29□□□□□ -0.6
SNHG1-205ENST00000537869 ST18O60284 1047 aa11.29□□□□□ -0.6
SNHG1-205ENST00000537869 HOMEZQ8IX15 550 aa11.29□□□□□ -0.6
SNHG1-205ENST00000537869 C1orf115Q9H7X2 142 aa11.29□□□□□ -0.6
SNHG1-205ENST00000537869 SEPT9Q9UHD8 586 aaPredicted RBP11.29□□□□□ -0.6
SNHG1-205ENST00000537869 CSPP1Q1MSJ5 1256 aa11.28□□□□□ -0.6
SNHG1-205ENST00000537869 TUSC1Q2TAM9 212 aa11.28□□□□□ -0.6
SNHG1-205ENST00000537869 SWT1Q5T5J6 900 aaKnown RBP11.28□□□□□ -0.6
SNHG1-205ENST00000537869 PPP2R2DQ66LE6 453 aa11.28□□□□□ -0.6
SNHG1-205ENST00000537869 SLC4A5Q9BY07 1137 aa11.28□□□□□ -0.6
SNHG1-205ENST00000537869 ARID3CA6NKF2 412 aa11.27□□□□□ -0.61
SNHG1-205ENST00000537869 MARVELD3Q96A59 401 aa11.27□□□□□ -0.61
SNHG1-205ENST00000537869 PCDHB15Q9Y5E8 787 aa11.27□□□□□ -0.61
SNHG1-205ENST00000537869 KDM4AO75164 1064 aa11.26□□□□□ -0.61
SNHG1-205ENST00000537869 SLC10A3P09131 477 aa11.26□□□□□ -0.61
SNHG1-205ENST00000537869 GCGRP47871 477 aa11.26□□□□□ -0.61
SNHG1-205ENST00000537869 BANK1Q8NDB2 785 aa11.26□□□□□ -0.61
SNHG1-205ENST00000537869 SNRKQ9NRH2 765 aa11.26□□□□□ -0.61
SNHG1-205ENST00000537869 EMP3P54852 163 aa11.25□□□□□ -0.61
SNHG1-205ENST00000537869 QPCTQ16769 361 aa11.25□□□□□ -0.61
SNHG1-205ENST00000537869 TMEM259Q4ZIN3 620 aa11.25□□□□□ -0.61
SNHG1-205ENST00000537869 POM121Q96HA1 1249 aa11.25□□□□□ -0.61
SNHG1-205ENST00000537869 VPS9D1Q9Y2B5 631 aa11.25□□□□□ -0.61
SNHG1-205ENST00000537869 SPDYE5A6NIY4 337 aa11.24□□□□□ -0.61
SNHG1-205ENST00000537869 APBB1O00213 710 aa11.24□□□□□ -0.61
SNHG1-205ENST00000537869 TRAK2O60296 914 aa11.24□□□□□ -0.61
SNHG1-205ENST00000537869 RSPH4AQ5TD94 716 aa11.24□□□□□ -0.61
SNHG1-205ENST00000537869 FAM205CA6NFA0 338 aa11.23□□□□□ -0.61
SNHG1-205ENST00000537869 LILRB3O75022 631 aa11.23□□□□□ -0.61
SNHG1-205ENST00000537869 GJA5P36382 358 aa11.23□□□□□ -0.61
SNHG1-205ENST00000537869 ZNF687Q8N1G0 1237 aa11.23□□□□□ -0.61
SNHG1-205ENST00000537869 PBX2P40425 430 aa11.22□□□□□ -0.61
SNHG1-205ENST00000537869 HDGFP51858 240 aaKnown RBP11.22□□□□□ -0.61
SNHG1-205ENST00000537869 FAM98CQ17RN3 349 aaKnown RBP11.22□□□□□ -0.61
SNHG1-205ENST00000537869 ARID3AQ99856 593 aa11.22□□□□□ -0.61
SNHG1-205ENST00000537869 RTL5Q5HYW3 569 aaPredicted RBP11.21□□□□□ -0.61
SNHG1-205ENST00000537869 HOXA2O43364 376 aa11.2□□□□□ -0.62
SNHG1-205ENST00000537869 USP46P62068 366 aa11.2□□□□□ -0.62
SNHG1-205ENST00000537869 CABLES1Q8TDN4 633 aa11.2□□□□□ -0.62
SNHG1-205ENST00000537869 NUTM2BA6NNL0 878 aaPredicted RBP11.19□□□□□ -0.62
SNHG1-205ENST00000537869 NUTM2EB1AL46 878 aaPredicted RBP11.19□□□□□ -0.62
SNHG1-205ENST00000537869 RAD21O60216 631 aa11.19□□□□□ -0.62
SNHG1-205ENST00000537869 NUTM2DQ5VT03 806 aaPredicted RBP11.19□□□□□ -0.62
SNHG1-205ENST00000537869 SAMD7Q7Z3H4 446 aa11.19□□□□□ -0.62
SNHG1-205ENST00000537869 NUTM2AQ8IVF1 878 aaPredicted RBP11.19□□□□□ -0.62
SNHG1-205ENST00000537869 HLA-CQ95604 372 aa11.19□□□□□ -0.62
SNHG1-205ENST00000537869 POTEB3A0JP26 581 aa11.18□□□□□ -0.62
SNHG1-205ENST00000537869 FDX1P10109 184 aa11.18□□□□□ -0.62
SNHG1-205ENST00000537869 POTEBQ6S5H4 581 aa11.18□□□□□ -0.62
SNHG1-205ENST00000537869 PROSER2Q86WR7 435 aaPredicted RBP11.18□□□□□ -0.62
SNHG1-205ENST00000537869 FNBP4Q8N3X1 1017 aaPredicted RBP11.18□□□□□ -0.62
SNHG1-205ENST00000537869 PCDHGC3Q9UN70 934 aa11.18□□□□□ -0.62
SNHG1-205ENST00000537869 COG6Q9Y2V7 657 aa11.18□□□□□ -0.62
SNHG1-205ENST00000537869 BHMG1C9JSJ3 638 aaPredicted RBP11.17□□□□□ -0.62
SNHG1-205ENST00000537869 HRCP23327 699 aa11.17□□□□□ -0.62
SNHG1-205ENST00000537869 GUCA2AQ02747 115 aa11.17□□□□□ -0.62
SNHG1-205ENST00000537869 FAM163AQ96GL9 167 aaPredicted RBP11.17□□□□□ -0.62
SNHG1-205ENST00000537869 AP1G2O75843 785 aa11.16□□□□□ -0.62
SNHG1-205ENST00000537869 PRPF38BQ5VTL8 546 aaKnown RBP11.16□□□□□ -0.62
SNHG1-205ENST00000537869 LAPTM4BQ86VI4 370 aa11.16□□□□□ -0.62
SNHG1-205ENST00000537869 MTMR14Q8NCE2 650 aa11.16□□□□□ -0.62
SNHG1-205ENST00000537869 SLF2Q8IX21 1173 aa11.15□□□□□ -0.62
SNHG1-205ENST00000537869 ZBTB3Q9H5J0 574 aa11.15□□□□□ -0.62
SNHG1-205ENST00000537869 ZNF777Q9ULD5 760 aaPredicted RBP11.15□□□□□ -0.62
SNHG1-205ENST00000537869 SLC4A3P48751 1232 aa11.14□□□□□ -0.63
SNHG1-205ENST00000537869 HS3ST6Q96QI5 342 aa11.14□□□□□ -0.63
SNHG1-205ENST00000537869 NBPF3Q9H094 633 aa11.14□□□□□ -0.63
SNHG1-205ENST00000537869 FUT2Q10981 343 aa11.13□□□□□ -0.63
SNHG1-205ENST00000537869 ZFRQ96KR1 1074 aaKnown RBP11.13□□□□□ -0.63
SNHG1-205ENST00000537869 TK2O00142 265 aa11.12□□□□□ -0.63
SNHG1-205ENST00000537869 RNF40O75150 1001 aa11.12□□□□□ -0.63
SNHG1-205ENST00000537869 CFHP08603 1231 aa11.12□□□□□ -0.63
SNHG1-205ENST00000537869 GDPD2Q9HCC8 539 aa11.11□□□□□ -0.63
SNHG1-205ENST00000537869 USP17L8P0C7I0 530 aa11.1□□□□□ -0.63
SNHG1-205ENST00000537869 CCDC82Q8N4S0 544 aa11.1□□□□□ -0.63
SNHG1-205ENST00000537869 GRIPAP1Q4V328 841 aa11.09□□□□□ -0.63
SNHG1-205ENST00000537869 MRPL50Q8N5N7 158 aaKnown RBP11.09□□□□□ -0.63
SNHG1-205ENST00000537869 ATP6V1AP38606 617 aa11.08□□□□□ -0.64
SNHG1-205ENST00000537869 CTDSPL2Q05D32 466 aa11.08□□□□□ -0.64
SNHG1-205ENST00000537869 MTMR2Q13614 643 aa11.08□□□□□ -0.64
SNHG1-205ENST00000537869 ADGRD1Q6QNK2 874 aa11.08□□□□□ -0.64
SNHG1-205ENST00000537869 SOCS7O14512 581 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms