RNA–Protein interactions for RNA: ENST00000537849.1

SPARC-207, Transcript of secreted protein acidic and cysteine rich, humanhuman

TSL 3

Gene SPARC, Length 218 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-207ENST00000537849 NEXMIFQ5QGS0 1516 aa16.62■□□□□ 0.25
SPARC-207ENST00000537849 PLPPR3Q6T4P5 718 aa16.62■□□□□ 0.25
SPARC-207ENST00000537849 STAG3Q9UJ98 1225 aa16.62■□□□□ 0.25
SPARC-207ENST00000537849 ZFYVE9O95405 1425 aa16.62■□□□□ 0.25
SPARC-207ENST00000537849 VGFO15240 615 aaPredicted RBP16.61■□□□□ 0.25
SPARC-207ENST00000537849 HSPA5P11021 654 aaKnown RBP16.61■□□□□ 0.25
SPARC-207ENST00000537849 EIF4G2P78344 907 aaKnown RBP eCLIP16.6■□□□□ 0.25
SPARC-207ENST00000537849 HIRIP3Q9BW71 556 aaPredicted RBP16.6■□□□□ 0.25
SPARC-207ENST00000537849 GPRASP1Q5JY77 1395 aa16.6■□□□□ 0.25
SPARC-207ENST00000537849 NLRP1Q9C000 1473 aa16.6■□□□□ 0.25
SPARC-207ENST00000537849 NUTM2DQ5VT03 806 aaPredicted RBP16.59■□□□□ 0.25
SPARC-207ENST00000537849 CARD11Q9BXL7 1154 aa16.59■□□□□ 0.25
SPARC-207ENST00000537849 KDM5AP29375 1690 aaKnown RBP16.59■□□□□ 0.25
SPARC-207ENST00000537849 CFAP70Q5T0N1 1121 aa16.58■□□□□ 0.24
SPARC-207ENST00000537849 C14orf93Q9H972 538 aaKnown RBP16.58■□□□□ 0.24
SPARC-207ENST00000537849 UBR1Q8IWV7 1749 aa16.58■□□□□ 0.24
SPARC-207ENST00000537849 KIAA1210Q9ULL0 1709 aa16.58■□□□□ 0.24
SPARC-207ENST00000537849 ROCK2O75116 1388 aaKnown RBP16.56■□□□□ 0.24
SPARC-207ENST00000537849 PTPRMP28827 1452 aa16.55■□□□□ 0.24
SPARC-207ENST00000537849 RIMS2Q9UQ26 1411 aa16.55■□□□□ 0.24
SPARC-207ENST00000537849 PIK3C2GO75747 1445 aa16.54■□□□□ 0.24
SPARC-207ENST00000537849 LAMC1P11047 1609 aa16.54■□□□□ 0.24
SPARC-207ENST00000537849 USP47Q96K76 1375 aa16.53■□□□□ 0.24
SPARC-207ENST00000537849 KDM4FA0A1W2PPD8 638 aa16.53■□□□□ 0.24
SPARC-207ENST00000537849 HDGFP51858 240 aaKnown RBP16.53■□□□□ 0.24
SPARC-207ENST00000537849 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.53■□□□□ 0.24
SPARC-207ENST00000537849 TMEM2Q9UHN6 1383 aa16.52■□□□□ 0.24
SPARC-207ENST00000537849 THEMISQ8N1K5 641 aaPredicted RBP16.52■□□□□ 0.24
SPARC-207ENST00000537849 MYO3AQ8NEV4 1616 aa16.5■□□□□ 0.23
SPARC-207ENST00000537849 ST20-MTHFSA0A0A6YYL1 179 aa16.5■□□□□ 0.23
SPARC-207ENST00000537849 C11orf95C9JLR9 678 aaPredicted RBP16.5■□□□□ 0.23
SPARC-207ENST00000537849 LTKP29376 864 aa16.5■□□□□ 0.23
SPARC-207ENST00000537849 ARHGAP23Q9P227 1491 aa16.49■□□□□ 0.23
SPARC-207ENST00000537849 SETBP1Q9Y6X0 1596 aa16.48■□□□□ 0.23
SPARC-207ENST00000537849 TMEM132EQ6IEE7 984 aa16.48■□□□□ 0.23
SPARC-207ENST00000537849 TXNDC2Q86VQ3 553 aa16.48■□□□□ 0.23
SPARC-207ENST00000537849 SLIT1O75093 1534 aa16.48■□□□□ 0.23
SPARC-207ENST00000537849 CEP170BQ9Y4F5 1589 aaPredicted RBP16.47■□□□□ 0.23
SPARC-207ENST00000537849 IQGAP1P46940 1657 aa16.46■□□□□ 0.23
SPARC-207ENST00000537849 SCAF11Q99590 1463 aaKnown RBP16.46■□□□□ 0.23
SPARC-207ENST00000537849 ADGRB1O14514 1584 aa16.46■□□□□ 0.23
SPARC-207ENST00000537849 ALKQ9UM73 1620 aa16.45■□□□□ 0.22
SPARC-207ENST00000537849 SENP3Q9H4L4 574 aaPredicted RBP16.45■□□□□ 0.22
SPARC-207ENST00000537849 ZNF142P52746 1687 aaPredicted RBP16.44■□□□□ 0.22
SPARC-207ENST00000537849 TESK2Q96S53 571 aa16.44■□□□□ 0.22
SPARC-207ENST00000537849 EID1Q9Y6B2 187 aa16.44■□□□□ 0.22
SPARC-207ENST00000537849 WASHC2AQ641Q2 1341 aa16.44■□□□□ 0.22
SPARC-207ENST00000537849 DIEXFQ68CQ4 756 aaKnown RBP16.43■□□□□ 0.22
SPARC-207ENST00000537849 NRXN3Q9Y4C0 1643 aa16.43■□□□□ 0.22
SPARC-207ENST00000537849 PLEKHG1Q9ULL1 1385 aa16.42■□□□□ 0.22
SPARC-207ENST00000537849 SETD1AO15047 1707 aaKnown RBP16.42■□□□□ 0.22
SPARC-207ENST00000537849 ASXL1Q8IXJ9 1541 aa16.41■□□□□ 0.22
SPARC-207ENST00000537849 TRAK1Q9UPV9 953 aa16.41■□□□□ 0.22
SPARC-207ENST00000537849 CCDC7Q96M83 1385 aa16.4■□□□□ 0.22
SPARC-207ENST00000537849 DDX10Q13206 875 aaKnown RBP16.4■□□□□ 0.22
SPARC-207ENST00000537849 ADAMTS13Q76LX8 1427 aa16.39■□□□□ 0.21
SPARC-207ENST00000537849 ANKLE2Q86XL3 938 aa16.39■□□□□ 0.21
SPARC-207ENST00000537849 MED14O60244 1454 aa16.39■□□□□ 0.21
SPARC-207ENST00000537849 KIF7Q2M1P5 1343 aa16.39■□□□□ 0.21
SPARC-207ENST00000537849 TBX22Q9Y458 520 aa16.38■□□□□ 0.21
SPARC-207ENST00000537849 POLR1AO95602 1720 aaPredicted RBP16.38■□□□□ 0.21
SPARC-207ENST00000537849 METP08581 1390 aa16.38■□□□□ 0.21
SPARC-207ENST00000537849 YTHDC2Q9H6S0 1430 aaKnown RBP16.37■□□□□ 0.21
SPARC-207ENST00000537849 BCANQ96GW7 911 aa16.37■□□□□ 0.21
SPARC-207ENST00000537849 STK26Q9P289 416 aa16.37■□□□□ 0.21
SPARC-207ENST00000537849 LRPPRCP42704 1394 aaKnown RBP16.36■□□□□ 0.21
SPARC-207ENST00000537849 EIF3AQ14152 1382 aaKnown RBP16.36■□□□□ 0.21
SPARC-207ENST00000537849 SLC26A8Q96RN1 970 aa16.35■□□□□ 0.21
SPARC-207ENST00000537849 ABCC11Q96J66 1382 aa16.35■□□□□ 0.21
SPARC-207ENST00000537849 CENPJQ9HC77 1338 aaPredicted RBP16.34■□□□□ 0.21
SPARC-207ENST00000537849 ARHGEF28Q8N1W1 1705 aaKnown RBP16.33■□□□□ 0.21
SPARC-207ENST00000537849 SLC24A1O60721 1099 aa16.33■□□□□ 0.2
SPARC-207ENST00000537849 TMF1P82094 1093 aa16.33■□□□□ 0.2
SPARC-207ENST00000537849 SIRT1Q96EB6 747 aa16.33■□□□□ 0.2
SPARC-207ENST00000537849 DISP3Q9P2K9 1392 aa16.32■□□□□ 0.2
SPARC-207ENST00000537849 SBNO2Q9Y2G9 1366 aa16.31■□□□□ 0.2
SPARC-207ENST00000537849 NCKAP5LQ9HCH0 1330 aa16.31■□□□□ 0.2
SPARC-207ENST00000537849 DLC1Q96QB1 1528 aa16.29■□□□□ 0.2
SPARC-207ENST00000537849 PTPRUQ92729 1446 aa16.29■□□□□ 0.2
SPARC-207ENST00000537849 WAPLQ7Z5K2 1190 aa16.29■□□□□ 0.2
SPARC-207ENST00000537849 PRAM1Q96QH2 718 aa16.29■□□□□ 0.2
SPARC-207ENST00000537849 QRICH2Q9H0J4 1663 aa16.28■□□□□ 0.2
SPARC-207ENST00000537849 POLR3GLQ9BT43 218 aa16.28■□□□□ 0.2
SPARC-207ENST00000537849 POGKQ9P215 609 aa16.28■□□□□ 0.2
SPARC-207ENST00000537849 DIP2AQ14689 1571 aa16.28■□□□□ 0.2
SPARC-207ENST00000537849 TECPR2O15040 1411 aa16.28■□□□□ 0.2
SPARC-207ENST00000537849 AMOTL2Q9Y2J4 779 aa16.27■□□□□ 0.2
SPARC-207ENST00000537849 NPHP4O75161 1426 aaPredicted RBP16.27■□□□□ 0.19
SPARC-207ENST00000537849 KNDC1Q76NI1 1749 aa16.26■□□□□ 0.19
SPARC-207ENST00000537849 HSPA2P54652 639 aa16.26■□□□□ 0.19
SPARC-207ENST00000537849 SAFB2Q14151 953 aaKnown RBP eCLIP16.26■□□□□ 0.19
SPARC-207ENST00000537849 CDCA8Q53HL2 280 aa16.26■□□□□ 0.19
SPARC-207ENST00000537849 PIK3R4Q99570 1358 aa16.26■□□□□ 0.19
SPARC-207ENST00000537849 PLEKHH1Q9ULM0 1364 aa16.26■□□□□ 0.19
SPARC-207ENST00000537849 PUS7Q96PZ0 661 aaKnown RBP16.25■□□□□ 0.19
SPARC-207ENST00000537849 FAM135BQ49AJ0 1406 aa16.25■□□□□ 0.19
SPARC-207ENST00000537849 CHD2O14647 1828 aaKnown RBP16.24■□□□□ 0.19
SPARC-207ENST00000537849 LMTK3Q96Q04 1460 aa16.24■□□□□ 0.19
SPARC-207ENST00000537849 MIER1Q8N108 512 aa16.24■□□□□ 0.19
SPARC-207ENST00000537849 ROBO2Q9HCK4 1378 aa16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms