RNA–Protein interactions for RNA: ENST00000537120.5

DDB1-208, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 1,215 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-208ENST00000537120 RPRD2Q5VT52 1461 aaKnown RBP12.65□□□□□ -0.38
DDB1-208ENST00000537120 LRRC7Q96NW7 1537 aa12.63□□□□□ -0.39
DDB1-208ENST00000537120 SYNMO15061 1565 aa12.63□□□□□ -0.39
DDB1-208ENST00000537120 TET3O43151 1660 aa12.62□□□□□ -0.39
DDB1-208ENST00000537120 ZNF326Q5BKZ1 582 aaKnown RBP12.62□□□□□ -0.39
DDB1-208ENST00000537120 RBM33Q96EV2 1170 aaKnown RBP12.62□□□□□ -0.39
DDB1-208ENST00000537120 C14orf37Q86TY3 774 aa12.61□□□□□ -0.39
DDB1-208ENST00000537120 ADGRB3O60242 1522 aa12.61□□□□□ -0.39
DDB1-208ENST00000537120 RIMS2Q9UQ26 1411 aa12.61□□□□□ -0.39
DDB1-208ENST00000537120 KDM5AP29375 1690 aaKnown RBP12.6□□□□□ -0.39
DDB1-208ENST00000537120 UNC13BO14795 1591 aa12.6□□□□□ -0.39
DDB1-208ENST00000537120 STRCP1A6NGW2 1772 aa12.59□□□□□ -0.39
DDB1-208ENST00000537120 GCC2Q8IWJ2 1684 aa12.59□□□□□ -0.39
DDB1-208ENST00000537120 TMEM94Q12767 1356 aa12.58□□□□□ -0.4
DDB1-208ENST00000537120 TBX22Q9Y458 520 aa12.58□□□□□ -0.4
DDB1-208ENST00000537120 PLEKHG1Q9ULL1 1385 aa12.57□□□□□ -0.4
DDB1-208ENST00000537120 RRBP1Q9P2E9 1410 aaKnown RBP12.56□□□□□ -0.4
DDB1-208ENST00000537120 IQGAP3Q86VI3 1631 aa12.56□□□□□ -0.4
DDB1-208ENST00000537120 E9PCH4 1651 aa12.56□□□□□ -0.4
DDB1-208ENST00000537120 MYO5BQ9ULV0 1848 aa12.55□□□□□ -0.4
DDB1-208ENST00000537120 SLC4A1APQ9BWU0 796 aaKnown RBP12.55□□□□□ -0.4
DDB1-208ENST00000537120 MSH6P52701 1360 aa12.55□□□□□ -0.4
DDB1-208ENST00000537120 TMEM131LA2VDJ0 1609 aa12.54□□□□□ -0.4
DDB1-208ENST00000537120 ZFYVE9O95405 1425 aa12.54□□□□□ -0.4
DDB1-208ENST00000537120 SLAIN2Q9P270 581 aa12.53□□□□□ -0.4
DDB1-208ENST00000537120 AMOTL2Q9Y2J4 779 aa12.53□□□□□ -0.4
DDB1-208ENST00000537120 NAIPQ13075 1403 aa12.53□□□□□ -0.4
DDB1-208ENST00000537120 ATF3P18847 181 aa12.52□□□□□ -0.41
DDB1-208ENST00000537120 PIAS4Q8N2W9 510 aaPredicted RBP12.5□□□□□ -0.41
DDB1-208ENST00000537120 C19orf44Q9H6X5 657 aa12.5□□□□□ -0.41
DDB1-208ENST00000537120 ALKQ9UM73 1620 aa12.49□□□□□ -0.41
DDB1-208ENST00000537120 NKTRP30414 1462 aaKnown RBP12.49□□□□□ -0.41
DDB1-208ENST00000537120 FAM135BQ49AJ0 1406 aa12.49□□□□□ -0.41
DDB1-208ENST00000537120 XIRP1Q702N8 1843 aaKnown RBP12.48□□□□□ -0.41
DDB1-208ENST00000537120 MED1Q15648 1581 aaPredicted RBP12.48□□□□□ -0.41
DDB1-208ENST00000537120 VGFO15240 615 aaPredicted RBP12.48□□□□□ -0.41
DDB1-208ENST00000537120 CADPS2Q86UW7 1296 aa12.48□□□□□ -0.41
DDB1-208ENST00000537120 CHD2O14647 1828 aaKnown RBP12.48□□□□□ -0.41
DDB1-208ENST00000537120 PIK3R4Q99570 1358 aa12.47□□□□□ -0.41
DDB1-208ENST00000537120 MSH5O43196 834 aa12.47□□□□□ -0.41
DDB1-208ENST00000537120 SPHKAPQ2M3C7 1700 aa12.47□□□□□ -0.41
DDB1-208ENST00000537120 HFM1A2PYH4 1435 aa12.46□□□□□ -0.41
DDB1-208ENST00000537120 ADAMTS13Q76LX8 1427 aa12.46□□□□□ -0.41
DDB1-208ENST00000537120 RGL3Q3MIN7 710 aa12.45□□□□□ -0.42
DDB1-208ENST00000537120 NCOA3Q9Y6Q9 1424 aa12.45□□□□□ -0.42
DDB1-208ENST00000537120 NWD1Q149M9 1564 aa12.44□□□□□ -0.42
DDB1-208ENST00000537120 RPGRIP1LQ68CZ1 1315 aa12.44□□□□□ -0.42
DDB1-208ENST00000537120 TRPM2O94759 1503 aa12.44□□□□□ -0.42
DDB1-208ENST00000537120 MPHOSPH9Q99550 1183 aa12.44□□□□□ -0.42
DDB1-208ENST00000537120 KIF1BO60333 1816 aa12.43□□□□□ -0.42
DDB1-208ENST00000537120 DIP2AQ14689 1571 aa12.43□□□□□ -0.42
DDB1-208ENST00000537120 ACIN1Q9UKV3 1341 aaKnown RBP12.42□□□□□ -0.42
DDB1-208ENST00000537120 ROBO1Q9Y6N7 1651 aa12.42□□□□□ -0.42
DDB1-208ENST00000537120 CLTCL1P53675 1640 aa12.41□□□□□ -0.42
DDB1-208ENST00000537120 MEX3CQ5U5Q3 659 aaKnown RBP12.41□□□□□ -0.42
DDB1-208ENST00000537120 PTPRUQ92729 1446 aa12.41□□□□□ -0.42
DDB1-208ENST00000537120 METP08581 1390 aa12.41□□□□□ -0.42
DDB1-208ENST00000537120 JCADQ9P266 1359 aa12.39□□□□□ -0.43
DDB1-208ENST00000537120 CCDC144AA2RUR9 1427 aa12.38□□□□□ -0.43
DDB1-208ENST00000537120 PHLPP1O60346 1717 aa12.37□□□□□ -0.43
DDB1-208ENST00000537120 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.37□□□□□ -0.43
DDB1-208ENST00000537120 BRINP3Q76B58 766 aa12.37□□□□□ -0.43
DDB1-208ENST00000537120 STK26Q9P289 416 aa12.37□□□□□ -0.43
DDB1-208ENST00000537120 SETBP1Q9Y6X0 1596 aa12.37□□□□□ -0.43
DDB1-208ENST00000537120 SETD5Q9C0A6 1442 aa12.37□□□□□ -0.43
DDB1-208ENST00000537120 NUTM2BA6NNL0 878 aaPredicted RBP12.36□□□□□ -0.43
DDB1-208ENST00000537120 NUTM2EB1AL46 878 aaPredicted RBP12.36□□□□□ -0.43
DDB1-208ENST00000537120 NUTM2AQ8IVF1 878 aaPredicted RBP12.36□□□□□ -0.43
DDB1-208ENST00000537120 NEXMIFQ5QGS0 1516 aa12.36□□□□□ -0.43
DDB1-208ENST00000537120 RGS17Q9UGC6 210 aaPredicted RBP12.35□□□□□ -0.43
DDB1-208ENST00000537120 LRRC59Q96AG4 307 aaKnown RBP12.34□□□□□ -0.43
DDB1-208ENST00000537120 SPATA31A6Q5VVP1 1343 aa12.34□□□□□ -0.43
DDB1-208ENST00000537120 ADGRF5Q8IZF2 1346 aa12.34□□□□□ -0.43
DDB1-208ENST00000537120 NRXN3Q9Y4C0 1643 aa12.33□□□□□ -0.43
DDB1-208ENST00000537120 ANKRD30BQ9BXX2 1392 aa12.32□□□□□ -0.44
DDB1-208ENST00000537120 DCCP43146 1447 aa12.32□□□□□ -0.44
DDB1-208ENST00000537120 TMEM132EQ6IEE7 984 aa12.32□□□□□ -0.44
DDB1-208ENST00000537120 POTEAQ6S8J7 498 aa12.32□□□□□ -0.44
DDB1-208ENST00000537120 DDX17Q92841 729 aaKnown RBP12.31□□□□□ -0.44
DDB1-208ENST00000537120 XRN1Q8IZH2 1706 aaKnown RBP12.31□□□□□ -0.44
DDB1-208ENST00000537120 RAB3GAP2Q9H2M9 1393 aa12.3□□□□□ -0.44
DDB1-208ENST00000537120 ROBO2Q9HCK4 1378 aa12.3□□□□□ -0.44
DDB1-208ENST00000537120 ADGRL3Q9HAR2 1447 aa12.3□□□□□ -0.44
DDB1-208ENST00000537120 ZNF772Q68DY9 489 aaPredicted RBP12.3□□□□□ -0.44
DDB1-208ENST00000537120 MST1RQ04912 1400 aa12.29□□□□□ -0.44
DDB1-208ENST00000537120 NUTM2FA1L443 756 aa12.29□□□□□ -0.44
DDB1-208ENST00000537120 ESCO1Q5FWF5 840 aa12.29□□□□□ -0.44
DDB1-208ENST00000537120 WAPLQ7Z5K2 1190 aa12.29□□□□□ -0.44
DDB1-208ENST00000537120 ORAI2Q96SN7 254 aa12.29□□□□□ -0.44
DDB1-208ENST00000537120 PPLO60437 1756 aa12.28□□□□□ -0.44
DDB1-208ENST00000537120 KDM2AQ9Y2K7 1162 aa12.28□□□□□ -0.44
DDB1-208ENST00000537120 SPATA31E1Q6ZUB1 1445 aa12.27□□□□□ -0.45
DDB1-208ENST00000537120 ASXL1Q8IXJ9 1541 aa12.27□□□□□ -0.45
DDB1-208ENST00000537120 COL16A1Q07092 1604 aaPredicted RBP12.26□□□□□ -0.45
DDB1-208ENST00000537120 AHDC1Q5TGY3 1603 aaPredicted RBP12.26□□□□□ -0.45
DDB1-208ENST00000537120 ADAMTS2O95450 1211 aa12.26□□□□□ -0.45
DDB1-208ENST00000537120 CFAP70Q5T0N1 1121 aa12.26□□□□□ -0.45
DDB1-208ENST00000537120 C14orf93Q9H972 538 aaKnown RBP12.26□□□□□ -0.45
DDB1-208ENST00000537120 POGKQ9P215 609 aa12.26□□□□□ -0.45
DDB1-208ENST00000537120 DHX57Q6P158 1386 aaKnown RBP12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 115.6 ms