RNA–Protein interactions for RNA: ENST00000535621.6

PDXDC1-205, Transcript of pyridoxal dependent decarboxylase domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene PDXDC1, Length 2,048 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDXDC1-205ENST00000535621 SLC52A1Q9NWF4 448 aa29.4■■■□□ 2.3
PDXDC1-205ENST00000535621 RIMS1Q86UR5 1692 aaKnown RBP29.4■■■□□ 2.3
PDXDC1-205ENST00000535621 GPRASP1Q5JY77 1395 aa29.4■■■□□ 2.3
PDXDC1-205ENST00000535621 C11orf95C9JLR9 678 aaPredicted RBP29.39■■■□□ 2.3
PDXDC1-205ENST00000535621 NBPF1Q3BBV0 1214 aa29.37■■■□□ 2.29
PDXDC1-205ENST00000535621 ADAMTSL3P82987 1691 aa29.36■■■□□ 2.29
PDXDC1-205ENST00000535621 LAMC1P11047 1609 aa29.36■■■□□ 2.29
PDXDC1-205ENST00000535621 POLR1AO95602 1720 aaPredicted RBP29.36■■■□□ 2.29
PDXDC1-205ENST00000535621 NUTM2DQ5VT03 806 aaPredicted RBP29.35■■■□□ 2.29
PDXDC1-205ENST00000535621 CCDC7Q96M83 1385 aa29.35■■■□□ 2.29
PDXDC1-205ENST00000535621 ADGRF5Q8IZF2 1346 aa29.35■■■□□ 2.29
PDXDC1-205ENST00000535621 TNRQ92752 1358 aa29.33■■■□□ 2.29
PDXDC1-205ENST00000535621 NEXMIFQ5QGS0 1516 aa29.33■■■□□ 2.29
PDXDC1-205ENST00000535621 MYOM2P54296 1465 aa29.32■■■□□ 2.28
PDXDC1-205ENST00000535621 KIF7Q2M1P5 1343 aa29.29■■■□□ 2.28
PDXDC1-205ENST00000535621 ST20-MTHFSA0A0A6YYL1 179 aa29.28■■■□□ 2.28
PDXDC1-205ENST00000535621 SENP3Q9H4L4 574 aaPredicted RBP29.28■■■□□ 2.28
PDXDC1-205ENST00000535621 A2ML1A8K2U0 1454 aa29.27■■■□□ 2.28
PDXDC1-205ENST00000535621 STAG3Q9UJ98 1225 aa29.27■■■□□ 2.28
PDXDC1-205ENST00000535621 NRXN1Q9ULB1 1477 aa29.25■■■□□ 2.27
PDXDC1-205ENST00000535621 KIAA1210Q9ULL0 1709 aa29.24■■■□□ 2.27
PDXDC1-205ENST00000535621 UBR1Q8IWV7 1749 aa29.23■■■□□ 2.27
PDXDC1-205ENST00000535621 RPGRIP1LQ68CZ1 1315 aa29.23■■■□□ 2.27
PDXDC1-205ENST00000535621 CFAP70Q5T0N1 1121 aa29.21■■■□□ 2.27
PDXDC1-205ENST00000535621 PIK3C2GO75747 1445 aa29.19■■■□□ 2.26
PDXDC1-205ENST00000535621 MYO3AQ8NEV4 1616 aa29.17■■■□□ 2.26
PDXDC1-205ENST00000535621 IQGAP1P46940 1657 aa29.16■■■□□ 2.26
PDXDC1-205ENST00000535621 ANP32CO43423 234 aa29.15■■■□□ 2.26
PDXDC1-205ENST00000535621 NLRP1Q9C000 1473 aa29.14■■■□□ 2.26
PDXDC1-205ENST00000535621 RIMS2Q9UQ26 1411 aa29.14■■■□□ 2.25
PDXDC1-205ENST00000535621 KDM5AP29375 1690 aaKnown RBP29.13■■■□□ 2.25
PDXDC1-205ENST00000535621 VGFO15240 615 aaPredicted RBP29.13■■■□□ 2.25
PDXDC1-205ENST00000535621 SCAF11Q99590 1463 aaKnown RBP29.12■■■□□ 2.25
PDXDC1-205ENST00000535621 TESK2Q96S53 571 aa29.11■■■□□ 2.25
PDXDC1-205ENST00000535621 ZFYVE9O95405 1425 aa29.11■■■□□ 2.25
PDXDC1-205ENST00000535621 C14orf93Q9H972 538 aaKnown RBP29.08■■■□□ 2.25
PDXDC1-205ENST00000535621 PTPRMP28827 1452 aa29.08■■■□□ 2.25
PDXDC1-205ENST00000535621 TMEM132EQ6IEE7 984 aa29.07■■■□□ 2.24
PDXDC1-205ENST00000535621 ADGRB1O14514 1584 aa29.06■■■□□ 2.24
PDXDC1-205ENST00000535621 POLR3GLQ9BT43 218 aa29.06■■■□□ 2.24
PDXDC1-205ENST00000535621 SETBP1Q9Y6X0 1596 aa29.05■■■□□ 2.24
PDXDC1-205ENST00000535621 TMEM2Q9UHN6 1383 aa29.05■■■□□ 2.24
PDXDC1-205ENST00000535621 CEP170BQ9Y4F5 1589 aaPredicted RBP29.04■■■□□ 2.24
PDXDC1-205ENST00000535621 ASXL1Q8IXJ9 1541 aa29.03■■■□□ 2.24
PDXDC1-205ENST00000535621 NRXN3Q9Y4C0 1643 aa29.01■■■□□ 2.24
PDXDC1-205ENST00000535621 YTHDC1Q96MU7 727 aaKnown RBP29.01■■■□□ 2.24
PDXDC1-205ENST00000535621 EIF3AQ14152 1382 aaKnown RBP29.01■■■□□ 2.23
PDXDC1-205ENST00000535621 DISP3Q9P2K9 1392 aa29.01■■■□□ 2.23
PDXDC1-205ENST00000535621 SETD1BQ9UPS6 1966 aaKnown RBP29■■■□□ 2.23
PDXDC1-205ENST00000535621 CCER2I3L3R5 266 aa29■■■□□ 2.23
PDXDC1-205ENST00000535621 ALKQ9UM73 1620 aa29■■■□□ 2.23
PDXDC1-205ENST00000535621 SETD1AO15047 1707 aaKnown RBP28.98■■■□□ 2.23
PDXDC1-205ENST00000535621 LTKP29376 864 aa28.98■■■□□ 2.23
PDXDC1-205ENST00000535621 TMF1P82094 1093 aa28.98■■■□□ 2.23
PDXDC1-205ENST00000535621 ZNF142P52746 1687 aaPredicted RBP28.97■■■□□ 2.23
PDXDC1-205ENST00000535621 TRAK1Q9UPV9 953 aa28.94■■■□□ 2.22
PDXDC1-205ENST00000535621 SLIT1O75093 1534 aa28.94■■■□□ 2.22
PDXDC1-205ENST00000535621 ARHGAP23Q9P227 1491 aa28.94■■■□□ 2.22
PDXDC1-205ENST00000535621 KDM4FA0A1W2PPD8 638 aa28.93■■■□□ 2.22
PDXDC1-205ENST00000535621 ABCF1Q8NE71 845 aaKnown RBP eCLIP28.93■■■□□ 2.22
PDXDC1-205ENST00000535621 TXNDC2Q86VQ3 553 aa28.92■■■□□ 2.22
PDXDC1-205ENST00000535621 THEMISQ8N1K5 641 aaPredicted RBP28.91■■■□□ 2.22
PDXDC1-205ENST00000535621 PRKRIP1Q9H875 184 aaPredicted RBP28.91■■■□□ 2.22
PDXDC1-205ENST00000535621 ARHGEF28Q8N1W1 1705 aaKnown RBP28.9■■■□□ 2.22
PDXDC1-205ENST00000535621 STK26Q9P289 416 aa28.89■■■□□ 2.21
PDXDC1-205ENST00000535621 CENPBP07199 599 aaPredicted RBP28.88■■■□□ 2.21
PDXDC1-205ENST00000535621 BCANQ96GW7 911 aa28.87■■■□□ 2.21
PDXDC1-205ENST00000535621 HDGFP51858 240 aaKnown RBP28.86■■■□□ 2.21
PDXDC1-205ENST00000535621 QRICH2Q9H0J4 1663 aa28.85■■■□□ 2.21
PDXDC1-205ENST00000535621 SLC24A1O60721 1099 aa28.84■■■□□ 2.21
PDXDC1-205ENST00000535621 METP08581 1390 aa28.84■■■□□ 2.21
PDXDC1-205ENST00000535621 SBNO2Q9Y2G9 1366 aa28.84■■■□□ 2.21
PDXDC1-205ENST00000535621 ADAMTS13Q76LX8 1427 aa28.84■■■□□ 2.21
PDXDC1-205ENST00000535621 YTHDC2Q9H6S0 1430 aaKnown RBP28.84■■■□□ 2.21
PDXDC1-205ENST00000535621 EID1Q9Y6B2 187 aa28.84■■■□□ 2.21
PDXDC1-205ENST00000535621 PLEKHG1Q9ULL1 1385 aa28.83■■■□□ 2.21
PDXDC1-205ENST00000535621 CDCA8Q53HL2 280 aa28.82■■■□□ 2.2
PDXDC1-205ENST00000535621 CENPJQ9HC77 1338 aaPredicted RBP28.82■■■□□ 2.2
PDXDC1-205ENST00000535621 SLC26A8Q96RN1 970 aa28.8■■■□□ 2.2
PDXDC1-205ENST00000535621 SAFB2Q14151 953 aaKnown RBP eCLIP28.78■■■□□ 2.2
PDXDC1-205ENST00000535621 PER1O15534 1290 aaPredicted RBP28.75■■■□□ 2.19
PDXDC1-205ENST00000535621 MED14O60244 1454 aa28.75■■■□□ 2.19
PDXDC1-205ENST00000535621 PANK3Q9H999 370 aa28.73■■■□□ 2.19
PDXDC1-205ENST00000535621 LRPPRCP42704 1394 aaKnown RBP28.72■■■□□ 2.19
PDXDC1-205ENST00000535621 MYOM1P52179 1685 aa28.72■■■□□ 2.19
PDXDC1-205ENST00000535621 PRAM1Q96QH2 718 aa28.72■■■□□ 2.19
PDXDC1-205ENST00000535621 PLEKHH1Q9ULM0 1364 aa28.7■■■□□ 2.18
PDXDC1-205ENST00000535621 CCDC184Q52MB2 194 aa28.69■■■□□ 2.18
PDXDC1-205ENST00000535621 ANKLE2Q86XL3 938 aa28.69■■■□□ 2.18
PDXDC1-205ENST00000535621 WAPLQ7Z5K2 1190 aa28.69■■■□□ 2.18
PDXDC1-205ENST00000535621 KNDC1Q76NI1 1749 aa28.68■■■□□ 2.18
PDXDC1-205ENST00000535621 PTPRUQ92729 1446 aa28.68■■■□□ 2.18
PDXDC1-205ENST00000535621 KTN1Q86UP2 1357 aaKnown RBP28.67■■■□□ 2.18
PDXDC1-205ENST00000535621 CNGB1Q14028 1251 aaPredicted RBP28.67■■■□□ 2.18
PDXDC1-205ENST00000535621 ABCC11Q96J66 1382 aa28.66■■■□□ 2.18
PDXDC1-205ENST00000535621 DLC1Q96QB1 1528 aa28.66■■■□□ 2.18
PDXDC1-205ENST00000535621 TULP4Q9NRJ4 1543 aa28.66■■■□□ 2.18
PDXDC1-205ENST00000535621 POGKQ9P215 609 aa28.65■■■□□ 2.18
PDXDC1-205ENST00000535621 NCKAP5LQ9HCH0 1330 aa28.65■■■□□ 2.18
PDXDC1-205ENST00000535621 HSPA2P54652 639 aa28.64■■■□□ 2.18
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms