RNA–Protein interactions for RNA: ENST00000535535.5

LMO3-212, Transcript of LIM domain only 3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene LMO3, Length 1,488 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-212ENST00000535535 TJAP1Q5JTD0 557 aa14.65□□□□□ -0.06
LMO3-212ENST00000535535 FAM161AQ3B820 660 aa14.64□□□□□ -0.07
LMO3-212ENST00000535535 RBM46Q8TBY0 533 aaKnown RBP14.64□□□□□ -0.07
LMO3-212ENST00000535535 DNAJB2P25686 324 aa14.63□□□□□ -0.07
LMO3-212ENST00000535535 SMYD5Q6GMV2 418 aa14.63□□□□□ -0.07
LMO3-212ENST00000535535 GPR37O15354 613 aa14.63□□□□□ -0.07
LMO3-212ENST00000535535 NECTIN2Q92692 538 aa14.63□□□□□ -0.07
LMO3-212ENST00000535535 MTRQ99707 1265 aa14.63□□□□□ -0.07
LMO3-212ENST00000535535 CUX2O14529 1486 aa14.62□□□□□ -0.07
LMO3-212ENST00000535535 TMEM134Q9H6X4 195 aa14.62□□□□□ -0.07
LMO3-212ENST00000535535 HIC1Q14526 733 aa14.61□□□□□ -0.07
LMO3-212ENST00000535535 VSIG10Q8N0Z9 540 aa14.6□□□□□ -0.07
LMO3-212ENST00000535535 RCCD1A6NED2 376 aa14.58□□□□□ -0.08
LMO3-212ENST00000535535 IL21Q9HBE4 155 aa14.58□□□□□ -0.08
LMO3-212ENST00000535535 SLC4A3P48751 1232 aa14.57□□□□□ -0.08
LMO3-212ENST00000535535 PXYLP1Q8TE99 480 aa14.55□□□□□ -0.08
LMO3-212ENST00000535535 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP14.53□□□□□ -0.08
LMO3-212ENST00000535535 GNPATO15228 680 aa14.53□□□□□ -0.08
LMO3-212ENST00000535535 FECHP22830 423 aa14.53□□□□□ -0.08
LMO3-212ENST00000535535 ZNF516Q92618 1163 aa14.53□□□□□ -0.08
LMO3-212ENST00000535535 OATP04181 439 aa14.51□□□□□ -0.09
LMO3-212ENST00000535535 METTL3Q86U44 580 aaKnown RBP14.51□□□□□ -0.09
LMO3-212ENST00000535535 ERCC6Q03468 1493 aa14.5□□□□□ -0.09
LMO3-212ENST00000535535 PRR14Q9BWN1 585 aa14.5□□□□□ -0.09
LMO3-212ENST00000535535 COPS2P61201 443 aa14.48□□□□□ -0.09
LMO3-212ENST00000535535 GPIHBP1Q8IV16 184 aa14.47□□□□□ -0.09
LMO3-212ENST00000535535 NCAPD3P42695 1498 aa14.46□□□□□ -0.09
LMO3-212ENST00000535535 SLC10A3P09131 477 aa14.44□□□□□ -0.1
LMO3-212ENST00000535535 PCDHB3Q9Y5E6 796 aa14.44□□□□□ -0.1
LMO3-212ENST00000535535 CFHP08603 1231 aa14.44□□□□□ -0.1
LMO3-212ENST00000535535 NKX2-3Q8TAU0 364 aa14.44□□□□□ -0.1
LMO3-212ENST00000535535 ACTN4O43707 911 aaKnown RBP14.42□□□□□ -0.1
LMO3-212ENST00000535535 PPP1R18Q6NYC8 613 aa14.42□□□□□ -0.1
LMO3-212ENST00000535535 BLOC1S3Q6QNY0 202 aa14.42□□□□□ -0.1
LMO3-212ENST00000535535 IRX2Q9BZI1 471 aaPredicted RBP14.42□□□□□ -0.1
LMO3-212ENST00000535535 ZPR1O75312 459 aa14.41□□□□□ -0.1
LMO3-212ENST00000535535 KMT5BQ4FZB7 885 aa14.41□□□□□ -0.1
LMO3-212ENST00000535535 HMGXB3Q12766 1538 aa14.37□□□□□ -0.11
LMO3-212ENST00000535535 ATAD2BQ9ULI0 1458 aa14.37□□□□□ -0.11
LMO3-212ENST00000535535 PHOX2BQ99453 314 aa14.37□□□□□ -0.11
LMO3-212ENST00000535535 EIF4ENIF1Q9NRA8 985 aaKnown RBP14.37□□□□□ -0.11
LMO3-212ENST00000535535 NLRP7Q8WX94 980 aa14.36□□□□□ -0.11
LMO3-212ENST00000535535 DAXXQ9UER7 740 aaPredicted RBP14.35□□□□□ -0.11
LMO3-212ENST00000535535 TLL1O43897 1013 aa14.34□□□□□ -0.11
LMO3-212ENST00000535535 SMARCA2P51531 1590 aa14.34□□□□□ -0.11
LMO3-212ENST00000535535 THOC2Q8NI27 1593 aaKnown RBP14.34□□□□□ -0.11
LMO3-212ENST00000535535 NESP48681 1621 aa14.34□□□□□ -0.11
LMO3-212ENST00000535535 SMARCA4P51532 1647 aa14.33□□□□□ -0.12
LMO3-212ENST00000535535 TULP1O00294 542 aaPredicted RBP14.32□□□□□ -0.12
LMO3-212ENST00000535535 PRKD2Q9BZL6 878 aa14.31□□□□□ -0.12
LMO3-212ENST00000535535 GGCXP38435 758 aa14.3□□□□□ -0.12
LMO3-212ENST00000535535 MAP2K5Q13163 448 aa14.3□□□□□ -0.12
LMO3-212ENST00000535535 RSPH4AQ5TD94 716 aa14.28□□□□□ -0.12
LMO3-212ENST00000535535 TMUB1Q9BVT8 246 aa14.28□□□□□ -0.12
LMO3-212ENST00000535535 V9GY48 417 aaPredicted RBP14.28□□□□□ -0.12
LMO3-212ENST00000535535 DDX11L8A8MPP1 907 aa14.26□□□□□ -0.13
LMO3-212ENST00000535535 RDH13Q8NBN7 331 aa14.26□□□□□ -0.13
LMO3-212ENST00000535535 NR1I2O75469 434 aa14.25□□□□□ -0.13
LMO3-212ENST00000535535 KIF21AQ7Z4S6 1674 aa14.25□□□□□ -0.13
LMO3-212ENST00000535535 PUS10Q3MIT2 529 aaKnown RBP14.24□□□□□ -0.13
LMO3-212ENST00000535535 LAMC3Q9Y6N6 1575 aa14.23□□□□□ -0.13
LMO3-212ENST00000535535 RNF223E7ERA6 249 aa14.23□□□□□ -0.13
LMO3-212ENST00000535535 ADH1BP00325 375 aa14.23□□□□□ -0.13
LMO3-212ENST00000535535 SULF1Q8IWU6 871 aa14.23□□□□□ -0.13
LMO3-212ENST00000535535 BAZ1BQ9UIG0 1483 aaKnown RBP14.21□□□□□ -0.13
LMO3-212ENST00000535535 IRF6O14896 467 aa14.21□□□□□ -0.13
LMO3-212ENST00000535535 S1PR4O95977 384 aa14.21□□□□□ -0.13
LMO3-212ENST00000535535 DHX30Q7L2E3 1194 aaKnown RBP eCLIP14.21□□□□□ -0.13
LMO3-212ENST00000535535 PEG3Q9GZU2 1588 aa14.21□□□□□ -0.14
LMO3-212ENST00000535535 GCGRP47871 477 aa14.2□□□□□ -0.14
LMO3-212ENST00000535535 SCUBE3Q8IX30 993 aa14.2□□□□□ -0.14
LMO3-212ENST00000535535 FUT2Q10981 343 aa14.19□□□□□ -0.14
LMO3-212ENST00000535535 MORN1Q5T089 497 aa14.18□□□□□ -0.14
LMO3-212ENST00000535535 BAZ1AQ9NRL2 1556 aaPredicted RBP14.18□□□□□ -0.14
LMO3-212ENST00000535535 MINK1Q8N4C8 1332 aaPredicted RBP14.18□□□□□ -0.14
LMO3-212ENST00000535535 CCDC102AQ96A19 550 aa14.18□□□□□ -0.14
LMO3-212ENST00000535535 EMID1Q96A84 441 aaPredicted RBP14.18□□□□□ -0.14
LMO3-212ENST00000535535 LAPTM4AQ15012 233 aa14.16□□□□□ -0.14
LMO3-212ENST00000535535 ANKLE1Q8NAG6 615 aa14.16□□□□□ -0.14
LMO3-212ENST00000535535 PPEF1O14829 653 aaPredicted RBP14.14□□□□□ -0.15
LMO3-212ENST00000535535 ATP6V1AP38606 617 aa14.14□□□□□ -0.15
LMO3-212ENST00000535535 LMOD2Q6P5Q4 547 aa14.14□□□□□ -0.15
LMO3-212ENST00000535535 Q6ZNB5 142 aa14.13□□□□□ -0.15
LMO3-212ENST00000535535 THAP11Q96EK4 314 aa14.13□□□□□ -0.15
LMO3-212ENST00000535535 SLC6A16Q9GZN6 736 aa14.13□□□□□ -0.15
LMO3-212ENST00000535535 GFRA3O60609 400 aa14.12□□□□□ -0.15
LMO3-212ENST00000535535 CD46P15529 392 aa14.12□□□□□ -0.15
LMO3-212ENST00000535535 SPSB2Q99619 263 aa14.12□□□□□ -0.15
LMO3-212ENST00000535535 MDM2Q00987 491 aaPredicted RBP14.12□□□□□ -0.15
LMO3-212ENST00000535535 SLC27A5Q9Y2P5 690 aa14.11□□□□□ -0.15
LMO3-212ENST00000535535 NRG2O14511 850 aaPredicted RBP14.1□□□□□ -0.15
LMO3-212ENST00000535535 SLC19A1P41440 591 aa14.09□□□□□ -0.15
LMO3-212ENST00000535535 PDS5BQ9NTI5 1447 aa14.08□□□□□ -0.15
LMO3-212ENST00000535535 SLC24A1O60721 1099 aa14.08□□□□□ -0.16
LMO3-212ENST00000535535 LCE2BO14633 110 aa14.06□□□□□ -0.16
LMO3-212ENST00000535535 PLA2G2CQ5R387 149 aa14.06□□□□□ -0.16
LMO3-212ENST00000535535 LIAT1Q6ZQX7 453 aa14.06□□□□□ -0.16
LMO3-212ENST00000535535 SALL2Q9Y467 1007 aaPredicted RBP14.06□□□□□ -0.16
LMO3-212ENST00000535535 FMNL1O95466 1100 aaPredicted RBP14.05□□□□□ -0.16
LMO3-212ENST00000535535 SPRYD7Q5W111 196 aa14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms