RNA–Protein interactions for RNA: ENST00000535535.5

LMO3-212, Transcript of LIM domain only 3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene LMO3, Length 1,488 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-212ENST00000535535 TJAP1Q5JTD0 557 aa14.65□□□□□ -0.06
LMO3-212ENST00000535535 FAM161AQ3B820 660 aa14.64□□□□□ -0.07
LMO3-212ENST00000535535 RBM46Q8TBY0 533 aaKnown RBP14.64□□□□□ -0.07
LMO3-212ENST00000535535 DNAJB2P25686 324 aa14.63□□□□□ -0.07
LMO3-212ENST00000535535 SMYD5Q6GMV2 418 aa14.63□□□□□ -0.07
LMO3-212ENST00000535535 GPR37O15354 613 aa14.63□□□□□ -0.07
LMO3-212ENST00000535535 NECTIN2Q92692 538 aa14.63□□□□□ -0.07
LMO3-212ENST00000535535 MTRQ99707 1265 aa14.63□□□□□ -0.07
LMO3-212ENST00000535535 CUX2O14529 1486 aa14.62□□□□□ -0.07
LMO3-212ENST00000535535 TMEM134Q9H6X4 195 aa14.62□□□□□ -0.07
LMO3-212ENST00000535535 HIC1Q14526 733 aa14.61□□□□□ -0.07
LMO3-212ENST00000535535 VSIG10Q8N0Z9 540 aa14.6□□□□□ -0.07
LMO3-212ENST00000535535 RCCD1A6NED2 376 aa14.58□□□□□ -0.08
LMO3-212ENST00000535535 IL21Q9HBE4 155 aa14.58□□□□□ -0.08
LMO3-212ENST00000535535 SLC4A3P48751 1232 aa14.57□□□□□ -0.08
LMO3-212ENST00000535535 PXYLP1Q8TE99 480 aa14.55□□□□□ -0.08
LMO3-212ENST00000535535 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP14.53□□□□□ -0.08
LMO3-212ENST00000535535 GNPATO15228 680 aa14.53□□□□□ -0.08
LMO3-212ENST00000535535 FECHP22830 423 aa14.53□□□□□ -0.08
LMO3-212ENST00000535535 ZNF516Q92618 1163 aa14.53□□□□□ -0.08
LMO3-212ENST00000535535 OATP04181 439 aa14.51□□□□□ -0.09
LMO3-212ENST00000535535 METTL3Q86U44 580 aaKnown RBP14.51□□□□□ -0.09
LMO3-212ENST00000535535 ERCC6Q03468 1493 aa14.5□□□□□ -0.09
LMO3-212ENST00000535535 PRR14Q9BWN1 585 aa14.5□□□□□ -0.09
LMO3-212ENST00000535535 COPS2P61201 443 aa14.48□□□□□ -0.09
LMO3-212ENST00000535535 GPIHBP1Q8IV16 184 aa14.47□□□□□ -0.09
LMO3-212ENST00000535535 NCAPD3P42695 1498 aa14.46□□□□□ -0.09
LMO3-212ENST00000535535 SLC10A3P09131 477 aa14.44□□□□□ -0.1
LMO3-212ENST00000535535 PCDHB3Q9Y5E6 796 aa14.44□□□□□ -0.1
LMO3-212ENST00000535535 CFHP08603 1231 aa14.44□□□□□ -0.1
LMO3-212ENST00000535535 NKX2-3Q8TAU0 364 aa14.44□□□□□ -0.1
LMO3-212ENST00000535535 ACTN4O43707 911 aaKnown RBP14.42□□□□□ -0.1
LMO3-212ENST00000535535 PPP1R18Q6NYC8 613 aa14.42□□□□□ -0.1
LMO3-212ENST00000535535 BLOC1S3Q6QNY0 202 aa14.42□□□□□ -0.1
LMO3-212ENST00000535535 IRX2Q9BZI1 471 aaPredicted RBP14.42□□□□□ -0.1
LMO3-212ENST00000535535 ZPR1O75312 459 aa14.41□□□□□ -0.1
LMO3-212ENST00000535535 KMT5BQ4FZB7 885 aa14.41□□□□□ -0.1
LMO3-212ENST00000535535 HMGXB3Q12766 1538 aa14.37□□□□□ -0.11
LMO3-212ENST00000535535 ATAD2BQ9ULI0 1458 aa14.37□□□□□ -0.11
LMO3-212ENST00000535535 PHOX2BQ99453 314 aa14.37□□□□□ -0.11
LMO3-212ENST00000535535 EIF4ENIF1Q9NRA8 985 aaKnown RBP14.37□□□□□ -0.11
LMO3-212ENST00000535535 NLRP7Q8WX94 980 aa14.36□□□□□ -0.11
LMO3-212ENST00000535535 DAXXQ9UER7 740 aaPredicted RBP14.35□□□□□ -0.11
LMO3-212ENST00000535535 TLL1O43897 1013 aa14.34□□□□□ -0.11
LMO3-212ENST00000535535 SMARCA2P51531 1590 aa14.34□□□□□ -0.11
LMO3-212ENST00000535535 THOC2Q8NI27 1593 aaKnown RBP14.34□□□□□ -0.11
LMO3-212ENST00000535535 NESP48681 1621 aa14.34□□□□□ -0.11
LMO3-212ENST00000535535 SMARCA4P51532 1647 aa14.33□□□□□ -0.12
LMO3-212ENST00000535535 TULP1O00294 542 aaPredicted RBP14.32□□□□□ -0.12
LMO3-212ENST00000535535 PRKD2Q9BZL6 878 aa14.31□□□□□ -0.12
LMO3-212ENST00000535535 GGCXP38435 758 aa14.3□□□□□ -0.12
LMO3-212ENST00000535535 MAP2K5Q13163 448 aa14.3□□□□□ -0.12
LMO3-212ENST00000535535 RSPH4AQ5TD94 716 aa14.28□□□□□ -0.12
LMO3-212ENST00000535535 TMUB1Q9BVT8 246 aa14.28□□□□□ -0.12
LMO3-212ENST00000535535 V9GY48 417 aaPredicted RBP14.28□□□□□ -0.12
LMO3-212ENST00000535535 DDX11L8A8MPP1 907 aa14.26□□□□□ -0.13
LMO3-212ENST00000535535 RDH13Q8NBN7 331 aa14.26□□□□□ -0.13
LMO3-212ENST00000535535 NR1I2O75469 434 aa14.25□□□□□ -0.13
LMO3-212ENST00000535535 KIF21AQ7Z4S6 1674 aa14.25□□□□□ -0.13
LMO3-212ENST00000535535 PUS10Q3MIT2 529 aaKnown RBP14.24□□□□□ -0.13
LMO3-212ENST00000535535 LAMC3Q9Y6N6 1575 aa14.23□□□□□ -0.13
LMO3-212ENST00000535535 RNF223E7ERA6 249 aa14.23□□□□□ -0.13
LMO3-212ENST00000535535 ADH1BP00325 375 aa14.23□□□□□ -0.13
LMO3-212ENST00000535535 SULF1Q8IWU6 871 aa14.23□□□□□ -0.13
LMO3-212ENST00000535535 BAZ1BQ9UIG0 1483 aaKnown RBP14.21□□□□□ -0.13
LMO3-212ENST00000535535 IRF6O14896 467 aa14.21□□□□□ -0.13
LMO3-212ENST00000535535 S1PR4O95977 384 aa14.21□□□□□ -0.13
LMO3-212ENST00000535535 DHX30Q7L2E3 1194 aaKnown RBP eCLIP14.21□□□□□ -0.13
LMO3-212ENST00000535535 PEG3Q9GZU2 1588 aa14.21□□□□□ -0.14
LMO3-212ENST00000535535 GCGRP47871 477 aa14.2□□□□□ -0.14
LMO3-212ENST00000535535 SCUBE3Q8IX30 993 aa14.2□□□□□ -0.14
LMO3-212ENST00000535535 FUT2Q10981 343 aa14.19□□□□□ -0.14
LMO3-212ENST00000535535 MORN1Q5T089 497 aa14.18□□□□□ -0.14
LMO3-212ENST00000535535 BAZ1AQ9NRL2 1556 aaPredicted RBP14.18□□□□□ -0.14
LMO3-212ENST00000535535 MINK1Q8N4C8 1332 aaPredicted RBP14.18□□□□□ -0.14
LMO3-212ENST00000535535 CCDC102AQ96A19 550 aa14.18□□□□□ -0.14
LMO3-212ENST00000535535 EMID1Q96A84 441 aaPredicted RBP14.18□□□□□ -0.14
LMO3-212ENST00000535535 LAPTM4AQ15012 233 aa14.16□□□□□ -0.14
LMO3-212ENST00000535535 ANKLE1Q8NAG6 615 aa14.16□□□□□ -0.14
LMO3-212ENST00000535535 PPEF1O14829 653 aaPredicted RBP14.14□□□□□ -0.15
LMO3-212ENST00000535535 ATP6V1AP38606 617 aa14.14□□□□□ -0.15
LMO3-212ENST00000535535 LMOD2Q6P5Q4 547 aa14.14□□□□□ -0.15
LMO3-212ENST00000535535 Q6ZNB5 142 aa14.13□□□□□ -0.15
LMO3-212ENST00000535535 THAP11Q96EK4 314 aa14.13□□□□□ -0.15
LMO3-212ENST00000535535 SLC6A16Q9GZN6 736 aa14.13□□□□□ -0.15
LMO3-212ENST00000535535 GFRA3O60609 400 aa14.12□□□□□ -0.15
LMO3-212ENST00000535535 CD46P15529 392 aa14.12□□□□□ -0.15
LMO3-212ENST00000535535 SPSB2Q99619 263 aa14.12□□□□□ -0.15
LMO3-212ENST00000535535 MDM2Q00987 491 aaPredicted RBP14.12□□□□□ -0.15
LMO3-212ENST00000535535 SLC27A5Q9Y2P5 690 aa14.11□□□□□ -0.15
LMO3-212ENST00000535535 NRG2O14511 850 aaPredicted RBP14.1□□□□□ -0.15
LMO3-212ENST00000535535 SLC19A1P41440 591 aa14.09□□□□□ -0.15
LMO3-212ENST00000535535 PDS5BQ9NTI5 1447 aa14.08□□□□□ -0.15
LMO3-212ENST00000535535 SLC24A1O60721 1099 aa14.08□□□□□ -0.16
LMO3-212ENST00000535535 LCE2BO14633 110 aa14.06□□□□□ -0.16
LMO3-212ENST00000535535 PLA2G2CQ5R387 149 aa14.06□□□□□ -0.16
LMO3-212ENST00000535535 LIAT1Q6ZQX7 453 aa14.06□□□□□ -0.16
LMO3-212ENST00000535535 SALL2Q9Y467 1007 aaPredicted RBP14.06□□□□□ -0.16
LMO3-212ENST00000535535 FMNL1O95466 1100 aaPredicted RBP14.05□□□□□ -0.16
LMO3-212ENST00000535535 SPRYD7Q5W111 196 aa14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms