RNA–Protein interactions for RNA: ENST00000535479.5

LPCAT3-203, Transcript of lysophosphatidylcholine acyltransferase 3, humanhuman

TSL 1 (best)

Gene LPCAT3, Length 2,902 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT3-203ENST00000535479 CARD14Q9BXL6 1004 aa18.07■□□□□ 0.48
LPCAT3-203ENST00000535479 ARHGEF12Q9NZN5 1544 aa18.07■□□□□ 0.48
LPCAT3-203ENST00000535479 GSE1Q14687 1217 aa18.07■□□□□ 0.48
LPCAT3-203ENST00000535479 SLFN5Q08AF3 891 aa18.06■□□□□ 0.48
LPCAT3-203ENST00000535479 TRAK1Q9UPV9 953 aa18.06■□□□□ 0.48
LPCAT3-203ENST00000535479 TRPM1Q7Z4N2 1603 aa18.06■□□□□ 0.48
LPCAT3-203ENST00000535479 PPM1GO15355 546 aaPredicted RBP18.05■□□□□ 0.48
LPCAT3-203ENST00000535479 CENPQQ7L2Z9 268 aaPredicted RBP18.05■□□□□ 0.48
LPCAT3-203ENST00000535479 BLMP54132 1417 aaPredicted RBP18.05■□□□□ 0.48
LPCAT3-203ENST00000535479 KIF3BO15066 747 aa18.05■□□□□ 0.48
LPCAT3-203ENST00000535479 ABCA8O94911 1581 aa18.05■□□□□ 0.48
LPCAT3-203ENST00000535479 E9PCH4 1651 aa18.04■□□□□ 0.48
LPCAT3-203ENST00000535479 ADCY10Q96PN6 1610 aa18.04■□□□□ 0.48
LPCAT3-203ENST00000535479 ADGRF5Q8IZF2 1346 aa18.04■□□□□ 0.48
LPCAT3-203ENST00000535479 SLC12A5Q9H2X9 1139 aa18.03■□□□□ 0.48
LPCAT3-203ENST00000535479 RLBP1P12271 317 aa18.02■□□□□ 0.48
LPCAT3-203ENST00000535479 POGKQ9P215 609 aa18.02■□□□□ 0.48
LPCAT3-203ENST00000535479 DDRGK1Q96HY6 314 aa18.02■□□□□ 0.47
LPCAT3-203ENST00000535479 ERCC6L2Q5T890 1561 aa18.01■□□□□ 0.47
LPCAT3-203ENST00000535479 TTC37Q6PGP7 1564 aa18.01■□□□□ 0.47
LPCAT3-203ENST00000535479 GZF1Q9H116 711 aaPredicted RBP18.01■□□□□ 0.47
LPCAT3-203ENST00000535479 WDR7Q9Y4E6 1490 aa18■□□□□ 0.47
LPCAT3-203ENST00000535479 TRAPPC8Q9Y2L5 1435 aa18■□□□□ 0.47
LPCAT3-203ENST00000535479 CDC42BPBQ9Y5S2 1711 aa18■□□□□ 0.47
LPCAT3-203ENST00000535479 ZMYM4Q5VZL5 1548 aa17.99■□□□□ 0.47
LPCAT3-203ENST00000535479 NUP160Q12769 1436 aa17.98■□□□□ 0.47
LPCAT3-203ENST00000535479 ZNF521Q96K83 1311 aa17.97■□□□□ 0.47
LPCAT3-203ENST00000535479 SHANK2Q9UPX8 1470 aa17.97■□□□□ 0.47
LPCAT3-203ENST00000535479 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.97■□□□□ 0.47
LPCAT3-203ENST00000535479 UGGT1Q9NYU2 1555 aa17.97■□□□□ 0.47
LPCAT3-203ENST00000535479 TSR2Q969E8 191 aaKnown RBP17.97■□□□□ 0.47
LPCAT3-203ENST00000535479 SPAG9O60271 1321 aaKnown RBP17.97■□□□□ 0.47
LPCAT3-203ENST00000535479 PRKCSHP14314 528 aaPredicted RBP17.96■□□□□ 0.47
LPCAT3-203ENST00000535479 PCDHB15Q9Y5E8 787 aa17.96■□□□□ 0.47
LPCAT3-203ENST00000535479 GPRASP1Q5JY77 1395 aa17.96■□□□□ 0.47
LPCAT3-203ENST00000535479 FBLN1P23142 703 aa17.95■□□□□ 0.46
LPCAT3-203ENST00000535479 CENPJQ9HC77 1338 aaPredicted RBP17.94■□□□□ 0.46
LPCAT3-203ENST00000535479 WWC1Q8IX03 1113 aa17.94■□□□□ 0.46
LPCAT3-203ENST00000535479 PRDM15P57071 1507 aaPredicted RBP17.94■□□□□ 0.46
LPCAT3-203ENST00000535479 MORC1Q86VD1 984 aa17.94■□□□□ 0.46
LPCAT3-203ENST00000535479 MYO5CQ9NQX4 1742 aa17.94■□□□□ 0.46
LPCAT3-203ENST00000535479 USP19O94966 1318 aa17.92■□□□□ 0.46
LPCAT3-203ENST00000535479 GGT6Q6P531 493 aa17.92■□□□□ 0.46
LPCAT3-203ENST00000535479 TCP11L2Q8N4U5 519 aa17.92■□□□□ 0.46
LPCAT3-203ENST00000535479 STK26Q9P289 416 aa17.92■□□□□ 0.46
LPCAT3-203ENST00000535479 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.92■□□□□ 0.46
LPCAT3-203ENST00000535479 EFCAB2Q5VUJ9 269 aa17.92■□□□□ 0.46
LPCAT3-203ENST00000535479 WASHC2CQ9Y4E1 1318 aa17.91■□□□□ 0.46
LPCAT3-203ENST00000535479 USP35Q9P2H5 1018 aa17.91■□□□□ 0.46
LPCAT3-203ENST00000535479 CFAP65Q6ZU64 1925 aaKnown RBP17.91■□□□□ 0.46
LPCAT3-203ENST00000535479 MTHFSP49914 203 aa17.9■□□□□ 0.46
LPCAT3-203ENST00000535479 U2SURPO15042 1029 aaKnown RBP17.89■□□□□ 0.46
LPCAT3-203ENST00000535479 U2AF1L5P0DN76 240 aaPredicted RBP17.88■□□□□ 0.45
LPCAT3-203ENST00000535479 U2AF1Q01081 240 aaKnown RBP eCLIP17.88■□□□□ 0.45
LPCAT3-203ENST00000535479 E9PSI1 815 aa17.88■□□□□ 0.45
LPCAT3-203ENST00000535479 MFAP1P55081 439 aaKnown RBP17.88■□□□□ 0.45
LPCAT3-203ENST00000535479 FOXD4L1Q9NU39 408 aa17.88■□□□□ 0.45
LPCAT3-203ENST00000535479 PDZRN3Q9UPQ7 1066 aa17.88■□□□□ 0.45
LPCAT3-203ENST00000535479 RSPH4AQ5TD94 716 aa17.87■□□□□ 0.45
LPCAT3-203ENST00000535479 CABP2Q9NPB3 220 aa17.86■□□□□ 0.45
LPCAT3-203ENST00000535479 NKTRP30414 1462 aaKnown RBP17.86■□□□□ 0.45
LPCAT3-203ENST00000535479 SCAPERQ9BY12 1400 aa17.85■□□□□ 0.45
LPCAT3-203ENST00000535479 RARSP54136 660 aaKnown RBP17.84■□□□□ 0.45
LPCAT3-203ENST00000535479 ARHGEF5Q12774 1597 aa17.84■□□□□ 0.45
LPCAT3-203ENST00000535479 PREX2Q70Z35 1606 aa17.84■□□□□ 0.45
LPCAT3-203ENST00000535479 TRMT2AQ8IZ69 625 aaKnown RBP17.83■□□□□ 0.45
LPCAT3-203ENST00000535479 ASXL1Q8IXJ9 1541 aa17.83■□□□□ 0.45
LPCAT3-203ENST00000535479 CDCA8Q53HL2 280 aa17.83■□□□□ 0.44
LPCAT3-203ENST00000535479 GGNBP2Q9H3C7 697 aa17.82■□□□□ 0.44
LPCAT3-203ENST00000535479 NSD3Q9BZ95 1437 aa17.82■□□□□ 0.44
LPCAT3-203ENST00000535479 SCAF11Q99590 1463 aaKnown RBP17.81■□□□□ 0.44
LPCAT3-203ENST00000535479 ATP10AO60312 1499 aa17.81■□□□□ 0.44
LPCAT3-203ENST00000535479 ELL2O00472 640 aaPredicted RBP17.81■□□□□ 0.44
LPCAT3-203ENST00000535479 PANK2Q9BZ23 570 aa17.8■□□□□ 0.44
LPCAT3-203ENST00000535479 TBC1D2Q9BYX2 928 aa17.79■□□□□ 0.44
LPCAT3-203ENST00000535479 ITPRIPQ8IWB1 547 aa17.79■□□□□ 0.44
LPCAT3-203ENST00000535479 FTSJ3Q8IY81 847 aaKnown RBP17.79■□□□□ 0.44
LPCAT3-203ENST00000535479 C1orf115Q9H7X2 142 aa17.78■□□□□ 0.44
LPCAT3-203ENST00000535479 EXOSC9Q06265 439 aaKnown RBP17.77■□□□□ 0.44
LPCAT3-203ENST00000535479 THUMPD2Q9BTF0 503 aaKnown RBP17.77■□□□□ 0.44
LPCAT3-203ENST00000535479 MAST1Q9Y2H9 1570 aa17.77■□□□□ 0.43
LPCAT3-203ENST00000535479 SMC4Q9NTJ3 1288 aa17.76■□□□□ 0.43
LPCAT3-203ENST00000535479 ERVK-7P63135 1459 aa17.76■□□□□ 0.43
LPCAT3-203ENST00000535479 INSRP06213 1382 aa17.75■□□□□ 0.43
LPCAT3-203ENST00000535479 CGNL1Q0VF96 1302 aa17.75■□□□□ 0.43
LPCAT3-203ENST00000535479 MADDQ8WXG6 1647 aa17.75■□□□□ 0.43
LPCAT3-203ENST00000535479 UNC13BO14795 1591 aa17.75■□□□□ 0.43
LPCAT3-203ENST00000535479 CLTCL1P53675 1640 aa17.75■□□□□ 0.43
LPCAT3-203ENST00000535479 NOS1P29475 1434 aa17.75■□□□□ 0.43
LPCAT3-203ENST00000535479 RUNDC1Q96C34 613 aa17.74■□□□□ 0.43
LPCAT3-203ENST00000535479 DUOX2Q9NRD8 1548 aa17.74■□□□□ 0.43
LPCAT3-203ENST00000535479 EIF3AQ14152 1382 aaKnown RBP17.74■□□□□ 0.43
LPCAT3-203ENST00000535479 IQGAP3Q86VI3 1631 aa17.74■□□□□ 0.43
LPCAT3-203ENST00000535479 RRAGDQ9NQL2 400 aaPredicted RBP17.73■□□□□ 0.43
LPCAT3-203ENST00000535479 LNPKQ9C0E8 428 aa17.72■□□□□ 0.43
LPCAT3-203ENST00000535479 SRPK2P78362 688 aaKnown RBP17.72■□□□□ 0.43
LPCAT3-203ENST00000535479 PIK3C2GO75747 1445 aa17.72■□□□□ 0.43
LPCAT3-203ENST00000535479 MINK1Q8N4C8 1332 aaPredicted RBP17.72■□□□□ 0.43
LPCAT3-203ENST00000535479 PLCH2O75038 1416 aa17.71■□□□□ 0.43
LPCAT3-203ENST00000535479 PDE3AQ14432 1141 aa17.71■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 78.7 ms