RNA–Protein interactions for RNA: ENST00000534374.1

YIF1A-213, Transcript of Yip1 interacting factor homolog A, membrane trafficking protein, humanhuman

TSL 2

Gene YIF1A, Length 540 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YIF1A-213ENST00000534374 ABCF1Q8NE71 845 aaKnown RBP eCLIP35.16■■■■□ 3.22
YIF1A-213ENST00000534374 RIMS2Q9UQ26 1411 aa35.15■■■■□ 3.22
YIF1A-213ENST00000534374 SCAF1Q9H7N4 1312 aaKnown RBP35.14■■■■□ 3.22
YIF1A-213ENST00000534374 PIP4K2BP78356 416 aa35.14■■■■□ 3.22
YIF1A-213ENST00000534374 MYO5BQ9ULV0 1848 aa35.13■■■■□ 3.21
YIF1A-213ENST00000534374 BCANQ96GW7 911 aa35.13■■■■□ 3.21
YIF1A-213ENST00000534374 HFM1A2PYH4 1435 aa35.12■■■■□ 3.21
YIF1A-213ENST00000534374 PLEKHG1Q9ULL1 1385 aa35.12■■■■□ 3.21
YIF1A-213ENST00000534374 PPP1R15AO75807 674 aaPredicted RBP35.11■■■■□ 3.21
YIF1A-213ENST00000534374 SOCS7O14512 581 aa35.07■■■■□ 3.2
YIF1A-213ENST00000534374 HSPA1LP34931 641 aa35.05■■■■□ 3.2
YIF1A-213ENST00000534374 TBX22Q9Y458 520 aa35.05■■■■□ 3.2
YIF1A-213ENST00000534374 TRIM52Q96A61 297 aa35.03■■■■□ 3.2
YIF1A-213ENST00000534374 ALKQ9UM73 1620 aa35.03■■■■□ 3.2
YIF1A-213ENST00000534374 PROSER2Q86WR7 435 aaPredicted RBP35.01■■■■□ 3.2
YIF1A-213ENST00000534374 SPHKAPQ2M3C7 1700 aa35■■■■□ 3.19
YIF1A-213ENST00000534374 NUTM2DQ5VT03 806 aaPredicted RBP34.98■■■■□ 3.19
YIF1A-213ENST00000534374 TMEM94Q12767 1356 aa34.98■■■■□ 3.19
YIF1A-213ENST00000534374 SENP3Q9H4L4 574 aaPredicted RBP34.96■■■■□ 3.19
YIF1A-213ENST00000534374 XIRP1Q702N8 1843 aaKnown RBP34.96■■■■□ 3.19
YIF1A-213ENST00000534374 SLC4A1APQ9BWU0 796 aaKnown RBP34.94■■■■□ 3.18
YIF1A-213ENST00000534374 NKTRP30414 1462 aaKnown RBP34.94■■■■□ 3.18
YIF1A-213ENST00000534374 NWD1Q149M9 1564 aa34.92■■■■□ 3.18
YIF1A-213ENST00000534374 ADAMTS13Q76LX8 1427 aa34.91■■■■□ 3.18
YIF1A-213ENST00000534374 CHD2O14647 1828 aaKnown RBP34.9■■■■□ 3.18
YIF1A-213ENST00000534374 ZNF326Q5BKZ1 582 aaKnown RBP34.9■■■■□ 3.18
YIF1A-213ENST00000534374 PIK3R4Q99570 1358 aa34.89■■■■□ 3.18
YIF1A-213ENST00000534374 TRPM2O94759 1503 aa34.89■■■■□ 3.18
YIF1A-213ENST00000534374 RBM33Q96EV2 1170 aaKnown RBP34.86■■■■□ 3.17
YIF1A-213ENST00000534374 DIP2AQ14689 1571 aa34.85■■■■□ 3.17
YIF1A-213ENST00000534374 CLTCL1P53675 1640 aa34.83■■■■□ 3.17
YIF1A-213ENST00000534374 ACIN1Q9UKV3 1341 aaKnown RBP34.82■■■■□ 3.17
YIF1A-213ENST00000534374 FAM135BQ49AJ0 1406 aa34.81■■■■□ 3.16
YIF1A-213ENST00000534374 NCOA3Q9Y6Q9 1424 aa34.81■■■■□ 3.16
YIF1A-213ENST00000534374 MED1Q15648 1581 aaPredicted RBP34.79■■■■□ 3.16
YIF1A-213ENST00000534374 MSH6P52701 1360 aa34.79■■■■□ 3.16
YIF1A-213ENST00000534374 KIF1BO60333 1816 aa34.77■■■■□ 3.16
YIF1A-213ENST00000534374 AMOTL2Q9Y2J4 779 aa34.77■■■■□ 3.16
YIF1A-213ENST00000534374 MPHOSPH9Q99550 1183 aa34.75■■■■□ 3.15
YIF1A-213ENST00000534374 SETBP1Q9Y6X0 1596 aa34.74■■■■□ 3.15
YIF1A-213ENST00000534374 RPGRIP1LQ68CZ1 1315 aa34.74■■■■□ 3.15
YIF1A-213ENST00000534374 VGFO15240 615 aaPredicted RBP34.72■■■■□ 3.15
YIF1A-213ENST00000534374 SLAIN2Q9P270 581 aa34.72■■■■□ 3.15
YIF1A-213ENST00000534374 NEXMIFQ5QGS0 1516 aa34.71■■■■□ 3.15
YIF1A-213ENST00000534374 PTPRUQ92729 1446 aa34.7■■■■□ 3.15
YIF1A-213ENST00000534374 FOXD1Q16676 465 aa34.69■■■■□ 3.14
YIF1A-213ENST00000534374 C19orf44Q9H6X5 657 aa34.69■■■■□ 3.14
YIF1A-213ENST00000534374 NRXN3Q9Y4C0 1643 aa34.69■■■■□ 3.14
YIF1A-213ENST00000534374 PHF23Q9BUL5 403 aaPredicted RBP34.68■■■■□ 3.14
YIF1A-213ENST00000534374 SETD5Q9C0A6 1442 aa34.68■■■■□ 3.14
YIF1A-213ENST00000534374 C14orf37Q86TY3 774 aa34.67■■■■□ 3.14
YIF1A-213ENST00000534374 METP08581 1390 aa34.64■■■■□ 3.14
YIF1A-213ENST00000534374 CADPS2Q86UW7 1296 aa34.63■■■■□ 3.13
YIF1A-213ENST00000534374 CCDC144AA2RUR9 1427 aa34.59■■■■□ 3.13
YIF1A-213ENST00000534374 ATF3P18847 181 aa34.59■■■■□ 3.13
YIF1A-213ENST00000534374 ROBO1Q9Y6N7 1651 aa34.58■■■■□ 3.13
YIF1A-213ENST00000534374 XRN1Q8IZH2 1706 aaKnown RBP34.55■■■■□ 3.12
YIF1A-213ENST00000534374 SIPA1L2Q9P2F8 1722 aaPredicted RBP34.53■■■■□ 3.12
YIF1A-213ENST00000534374 RAB3GAP2Q9H2M9 1393 aa34.51■■■■□ 3.12
YIF1A-213ENST00000534374 RGL3Q3MIN7 710 aa34.5■■■■□ 3.11
YIF1A-213ENST00000534374 PPLO60437 1756 aa34.49■■■■□ 3.11
YIF1A-213ENST00000534374 SPATA31E1Q6ZUB1 1445 aa34.49■■■■□ 3.11
YIF1A-213ENST00000534374 DCCP43146 1447 aa34.48■■■■□ 3.11
YIF1A-213ENST00000534374 HRCP23327 699 aa34.47■■■■□ 3.11
YIF1A-213ENST00000534374 ANKRD30BQ9BXX2 1392 aa34.46■■■■□ 3.11
YIF1A-213ENST00000534374 ADGRF5Q8IZF2 1346 aa34.43■■■■□ 3.1
YIF1A-213ENST00000534374 SETD1AO15047 1707 aaKnown RBP34.41■■■■□ 3.1
YIF1A-213ENST00000534374 PTCH1Q13635 1447 aa34.38■■■■□ 3.09
YIF1A-213ENST00000534374 PRAG1Q86YV5 1406 aa34.38■■■■□ 3.09
YIF1A-213ENST00000534374 ADGRL3Q9HAR2 1447 aa34.38■■■■□ 3.09
YIF1A-213ENST00000534374 PHLPP1O60346 1717 aa34.38■■■■□ 3.09
YIF1A-213ENST00000534374 BRINP3Q76B58 766 aa34.37■■■■□ 3.09
YIF1A-213ENST00000534374 ROBO2Q9HCK4 1378 aa34.36■■■■□ 3.09
YIF1A-213ENST00000534374 JCADQ9P266 1359 aa34.36■■■■□ 3.09
YIF1A-213ENST00000534374 MST1RQ04912 1400 aa34.33■■■■□ 3.09
YIF1A-213ENST00000534374 AHDC1Q5TGY3 1603 aaPredicted RBP34.3■■■■□ 3.08
YIF1A-213ENST00000534374 RGS17Q9UGC6 210 aaPredicted RBP34.3■■■■□ 3.08
YIF1A-213ENST00000534374 IFT172Q9UG01 1749 aa34.3■■■■□ 3.08
YIF1A-213ENST00000534374 COL16A1Q07092 1604 aaPredicted RBP34.29■■■■□ 3.08
YIF1A-213ENST00000534374 PIK3C2GO75747 1445 aa34.27■■■■□ 3.08
YIF1A-213ENST00000534374 NALCNQ8IZF0 1738 aa34.25■■■■□ 3.07
YIF1A-213ENST00000534374 C14orf93Q9H972 538 aaKnown RBP34.24■■■■□ 3.07
YIF1A-213ENST00000534374 ABCC11Q96J66 1382 aa34.23■■■■□ 3.07
YIF1A-213ENST00000534374 SPATA31A6Q5VVP1 1343 aa34.23■■■■□ 3.07
YIF1A-213ENST00000534374 LRPPRCP42704 1394 aaKnown RBP34.23■■■■□ 3.07
YIF1A-213ENST00000534374 ASXL1Q8IXJ9 1541 aa34.22■■■■□ 3.07
YIF1A-213ENST00000534374 TMEM132EQ6IEE7 984 aa34.21■■■■□ 3.07
YIF1A-213ENST00000534374 STK26Q9P289 416 aa34.21■■■■□ 3.07
YIF1A-213ENST00000534374 TECPR2O15040 1411 aa34.21■■■■□ 3.07
YIF1A-213ENST00000534374 C1orf167Q5SNV9 1468 aa34.2■■■■□ 3.06
YIF1A-213ENST00000534374 SIRT1Q96EB6 747 aa34.18■■■■□ 3.06
YIF1A-213ENST00000534374 NRXN1Q9ULB1 1477 aa34.18■■■■□ 3.06
YIF1A-213ENST00000534374 MYOM2P54296 1465 aa34.17■■■■□ 3.06
YIF1A-213ENST00000534374 LRRC59Q96AG4 307 aaKnown RBP34.17■■■■□ 3.06
YIF1A-213ENST00000534374 WAPLQ7Z5K2 1190 aa34.15■■■■□ 3.06
YIF1A-213ENST00000534374 STAC3Q96MF2 364 aa34.15■■■■□ 3.06
YIF1A-213ENST00000534374 CFAP70Q5T0N1 1121 aa34.13■■■■□ 3.05
YIF1A-213ENST00000534374 YTHDC2Q9H6S0 1430 aaKnown RBP34.13■■■■□ 3.05
YIF1A-213ENST00000534374 ORAI2Q96SN7 254 aa34.12■■■■□ 3.05
YIF1A-213ENST00000534374 NHSL1Q5SYE7 1610 aa34.12■■■■□ 3.05
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms