RNA–Protein interactions for RNA: ENST00000534313.5

SIPA1-209, Transcript of signal-induced proliferation-associated 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIPA1, Length 3,521 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIPA1-209ENST00000534313 GOLGA2Q08379 1002 aa22.67■■□□□ 1.22
SIPA1-209ENST00000534313 ZMYM4Q5VZL5 1548 aa22.67■■□□□ 1.22
SIPA1-209ENST00000534313 APAF1O14727 1248 aa22.67■■□□□ 1.22
SIPA1-209ENST00000534313 CDCA8Q53HL2 280 aa22.67■■□□□ 1.22
SIPA1-209ENST00000534313 SPINK5Q9NQ38 1064 aaPredicted RBP22.67■■□□□ 1.22
SIPA1-209ENST00000534313 ADGRF5Q8IZF2 1346 aa22.67■■□□□ 1.22
SIPA1-209ENST00000534313 MADDQ8WXG6 1647 aa22.66■■□□□ 1.22
SIPA1-209ENST00000534313 SCAF11Q99590 1463 aaKnown RBP22.66■■□□□ 1.22
SIPA1-209ENST00000534313 SCAPERQ9BY12 1400 aa22.65■■□□□ 1.22
SIPA1-209ENST00000534313 TNNT2P45379 298 aaPredicted RBP22.64■■□□□ 1.22
SIPA1-209ENST00000534313 RNF17Q9BXT8 1623 aaKnown RBP22.64■■□□□ 1.21
SIPA1-209ENST00000534313 NEFMP07197 916 aa22.64■■□□□ 1.21
SIPA1-209ENST00000534313 UGGT1Q9NYU2 1555 aa22.63■■□□□ 1.21
SIPA1-209ENST00000534313 SENP3Q9H4L4 574 aaPredicted RBP22.63■■□□□ 1.21
SIPA1-209ENST00000534313 DAXXQ9UER7 740 aaPredicted RBP22.63■■□□□ 1.21
SIPA1-209ENST00000534313 CLTCL1P53675 1640 aa22.62■■□□□ 1.21
SIPA1-209ENST00000534313 MS4A1P11836 297 aa22.61■■□□□ 1.21
SIPA1-209ENST00000534313 ZBTB4Q9P1Z0 1013 aaPredicted RBP22.61■■□□□ 1.21
SIPA1-209ENST00000534313 KANK1Q14678 1352 aa22.61■■□□□ 1.21
SIPA1-209ENST00000534313 PRKCSHP14314 528 aaPredicted RBP22.61■■□□□ 1.21
SIPA1-209ENST00000534313 CARD14Q9BXL6 1004 aa22.6■■□□□ 1.21
SIPA1-209ENST00000534313 DMRT2Q9Y5R5 561 aa22.6■■□□□ 1.21
SIPA1-209ENST00000534313 TRPM2O94759 1503 aa22.6■■□□□ 1.21
SIPA1-209ENST00000534313 BCAR3O75815 825 aa22.6■■□□□ 1.21
SIPA1-209ENST00000534313 ZFYVE16Q7Z3T8 1539 aa22.59■■□□□ 1.21
SIPA1-209ENST00000534313 SLC4A3P48751 1232 aa22.59■■□□□ 1.21
SIPA1-209ENST00000534313 RGS3P49796 1198 aa22.59■■□□□ 1.21
SIPA1-209ENST00000534313 IL27Q8NEV9 243 aa22.59■■□□□ 1.21
SIPA1-209ENST00000534313 ZNF521Q96K83 1311 aa22.58■■□□□ 1.21
SIPA1-209ENST00000534313 SLFN5Q08AF3 891 aa22.58■■□□□ 1.21
SIPA1-209ENST00000534313 NEUROD2Q15784 382 aa22.58■■□□□ 1.21
SIPA1-209ENST00000534313 ASXL1Q8IXJ9 1541 aa22.58■■□□□ 1.21
SIPA1-209ENST00000534313 PTPRTO14522 1441 aa22.57■■□□□ 1.2
SIPA1-209ENST00000534313 INSRP06213 1382 aa22.57■■□□□ 1.2
SIPA1-209ENST00000534313 IQGAP1P46940 1657 aa22.57■■□□□ 1.2
SIPA1-209ENST00000534313 TRAK1Q9UPV9 953 aa22.56■■□□□ 1.2
SIPA1-209ENST00000534313 EIF3AQ14152 1382 aaKnown RBP22.56■■□□□ 1.2
SIPA1-209ENST00000534313 FANCAO15360 1455 aa22.56■■□□□ 1.2
SIPA1-209ENST00000534313 EIF5BO60841 1220 aaKnown RBP22.56■■□□□ 1.2
SIPA1-209ENST00000534313 NUTM2DQ5VT03 806 aaPredicted RBP22.54■■□□□ 1.2
SIPA1-209ENST00000534313 SPHKAPQ2M3C7 1700 aa22.54■■□□□ 1.2
SIPA1-209ENST00000534313 RTEL1-TNFRSF6BF6WH68 1400 aa22.54■■□□□ 1.2
SIPA1-209ENST00000534313 KDM2BQ8NHM5 1336 aa22.54■■□□□ 1.2
SIPA1-209ENST00000534313 RRP7AQ9Y3A4 280 aaKnown RBP22.53■■□□□ 1.2
SIPA1-209ENST00000534313 TMEM132EQ6IEE7 984 aa22.52■■□□□ 1.2
SIPA1-209ENST00000534313 SYNMO15061 1565 aa22.52■■□□□ 1.2
SIPA1-209ENST00000534313 GOLGA6L2Q8N9W4 650 aaPredicted RBP22.52■■□□□ 1.2
SIPA1-209ENST00000534313 GGT6Q6P531 493 aa22.51■■□□□ 1.19
SIPA1-209ENST00000534313 UHRF1BP1LA0JNW5 1464 aa22.51■■□□□ 1.19
SIPA1-209ENST00000534313 ATP7AQ04656 1500 aa22.51■■□□□ 1.19
SIPA1-209ENST00000534313 CENPQQ7L2Z9 268 aaPredicted RBP22.51■■□□□ 1.19
SIPA1-209ENST00000534313 ADGRL1O94910 1474 aa22.5■■□□□ 1.19
SIPA1-209ENST00000534313 PIK3C2GO75747 1445 aa22.5■■□□□ 1.19
SIPA1-209ENST00000534313 CEP152O94986 1710 aa22.5■■□□□ 1.19
SIPA1-209ENST00000534313 SLC12A5Q9H2X9 1139 aa22.49■■□□□ 1.19
SIPA1-209ENST00000534313 ERVK-7P63135 1459 aa22.49■■□□□ 1.19
SIPA1-209ENST00000534313 STAC3Q96MF2 364 aa22.48■■□□□ 1.19
SIPA1-209ENST00000534313 MYOM1P52179 1685 aa22.47■■□□□ 1.19
SIPA1-209ENST00000534313 CLASP1Q7Z460 1538 aa22.47■■□□□ 1.19
SIPA1-209ENST00000534313 TET3O43151 1660 aa22.45■■□□□ 1.18
SIPA1-209ENST00000534313 CANXP27824 592 aaKnown RBP22.45■■□□□ 1.18
SIPA1-209ENST00000534313 MORC1Q86VD1 984 aa22.45■■□□□ 1.18
SIPA1-209ENST00000534313 NOS1P29475 1434 aa22.45■■□□□ 1.18
SIPA1-209ENST00000534313 FRAT1Q92837 279 aaPredicted RBP22.44■■□□□ 1.18
SIPA1-209ENST00000534313 TRMT2AQ8IZ69 625 aaKnown RBP22.44■■□□□ 1.18
SIPA1-209ENST00000534313 PANK1Q8TE04 598 aa22.44■■□□□ 1.18
SIPA1-209ENST00000534313 CENPJQ9HC77 1338 aaPredicted RBP22.44■■□□□ 1.18
SIPA1-209ENST00000534313 E9PSI1 815 aa22.43■■□□□ 1.18
SIPA1-209ENST00000534313 SAFB2Q14151 953 aaKnown RBP eCLIP22.43■■□□□ 1.18
SIPA1-209ENST00000534313 CFAP65Q6ZU64 1925 aaKnown RBP22.42■■□□□ 1.18
SIPA1-209ENST00000534313 KDM5AP29375 1690 aaKnown RBP22.42■■□□□ 1.18
SIPA1-209ENST00000534313 COG6Q9Y2V7 657 aa22.42■■□□□ 1.18
SIPA1-209ENST00000534313 C8orf34Q49A92 452 aa22.42■■□□□ 1.18
SIPA1-209ENST00000534313 ABCA6Q8N139 1617 aa22.42■■□□□ 1.18
SIPA1-209ENST00000534313 NKTRP30414 1462 aaKnown RBP22.41■■□□□ 1.18
SIPA1-209ENST00000534313 NPC1L1Q9UHC9 1359 aa22.41■■□□□ 1.18
SIPA1-209ENST00000534313 IGHDP01880 384 aa22.41■■□□□ 1.18
SIPA1-209ENST00000534313 BCL2L13Q9BXK5 485 aa22.41■■□□□ 1.18
SIPA1-209ENST00000534313 DEPDC5O75140 1603 aa22.41■■□□□ 1.18
SIPA1-209ENST00000534313 FAM161AQ3B820 660 aa22.41■■□□□ 1.18
SIPA1-209ENST00000534313 WWC1Q8IX03 1113 aa22.4■■□□□ 1.18
SIPA1-209ENST00000534313 NSD3Q9BZ95 1437 aa22.4■■□□□ 1.18
SIPA1-209ENST00000534313 MAP3K4Q9Y6R4 1608 aa22.39■■□□□ 1.17
SIPA1-209ENST00000534313 DDRGK1Q96HY6 314 aa22.39■■□□□ 1.17
SIPA1-209ENST00000534313 INO80Q9ULG1 1556 aaPredicted RBP22.39■■□□□ 1.17
SIPA1-209ENST00000534313 TNNQ9UQP3 1299 aa22.37■■□□□ 1.17
SIPA1-209ENST00000534313 ASXL2Q76L83 1435 aa22.37■■□□□ 1.17
SIPA1-209ENST00000534313 VWDEQ8N2E2 1590 aa22.36■■□□□ 1.17
SIPA1-209ENST00000534313 MROH1Q8NDA8 1641 aa22.36■■□□□ 1.17
SIPA1-209ENST00000534313 MTHFSP49914 203 aa22.35■■□□□ 1.17
SIPA1-209ENST00000534313 TCP11L2Q8N4U5 519 aa22.35■■□□□ 1.17
SIPA1-209ENST00000534313 ARAP3Q8WWN8 1544 aa22.34■■□□□ 1.17
SIPA1-209ENST00000534313 MROH2AA6NES4 1674 aa22.34■■□□□ 1.17
SIPA1-209ENST00000534313 PPM1GO15355 546 aaPredicted RBP22.34■■□□□ 1.17
SIPA1-209ENST00000534313 ABCA9Q8IUA7 1624 aa22.33■■□□□ 1.17
SIPA1-209ENST00000534313 CLUAP1Q96AJ1 413 aa22.33■■□□□ 1.17
SIPA1-209ENST00000534313 MYOM2P54296 1465 aa22.33■■□□□ 1.17
SIPA1-209ENST00000534313 SLC24A1O60721 1099 aa22.31■■□□□ 1.16
SIPA1-209ENST00000534313 PPRC1Q5VV67 1664 aaKnown RBP22.31■■□□□ 1.16
SIPA1-209ENST00000534313 EFCAB6Q5THR3 1501 aa22.31■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms