RNA–Protein interactions for RNA: ENST00000533820.5

CAPN1-226, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,083 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-226ENST00000533820 SPAG9O60271 1321 aaKnown RBP25.24■■□□□ 1.63
CAPN1-226ENST00000533820 IQGAP3Q86VI3 1631 aa25.22■■□□□ 1.63
CAPN1-226ENST00000533820 BCAR3O75815 825 aa25.21■■□□□ 1.63
CAPN1-226ENST00000533820 DUOX2Q9NRD8 1548 aa25.21■■□□□ 1.63
CAPN1-226ENST00000533820 TNNT2P45379 298 aaPredicted RBP25.2■■□□□ 1.62
CAPN1-226ENST00000533820 CFAP70Q5T0N1 1121 aa25.2■■□□□ 1.62
CAPN1-226ENST00000533820 BRPF3Q9ULD4 1205 aa25.2■■□□□ 1.62
CAPN1-226ENST00000533820 EIF2AK4Q9P2K8 1649 aaKnown RBP25.19■■□□□ 1.62
CAPN1-226ENST00000533820 DAXXQ9UER7 740 aaPredicted RBP25.18■■□□□ 1.62
CAPN1-226ENST00000533820 NEUROD2Q15784 382 aa25.18■■□□□ 1.62
CAPN1-226ENST00000533820 CDCA8Q53HL2 280 aa25.18■■□□□ 1.62
CAPN1-226ENST00000533820 DMRT2Q9Y5R5 561 aa25.18■■□□□ 1.62
CAPN1-226ENST00000533820 KDM2BQ8NHM5 1336 aa25.18■■□□□ 1.62
CAPN1-226ENST00000533820 KIF3BO15066 747 aa25.17■■□□□ 1.62
CAPN1-226ENST00000533820 CENPQQ7L2Z9 268 aaPredicted RBP25.16■■□□□ 1.62
CAPN1-226ENST00000533820 MAST1Q9Y2H9 1570 aa25.16■■□□□ 1.62
CAPN1-226ENST00000533820 SLFN5Q08AF3 891 aa25.16■■□□□ 1.62
CAPN1-226ENST00000533820 GOLGA6L2Q8N9W4 650 aaPredicted RBP25.15■■□□□ 1.62
CAPN1-226ENST00000533820 CHGAP10645 457 aaKnown RBP25.14■■□□□ 1.62
CAPN1-226ENST00000533820 ZNF521Q96K83 1311 aa25.14■■□□□ 1.61
CAPN1-226ENST00000533820 PLCH2O75038 1416 aa25.13■■□□□ 1.61
CAPN1-226ENST00000533820 PLXNC1O60486 1568 aa25.13■■□□□ 1.61
CAPN1-226ENST00000533820 LAMC1P11047 1609 aa25.13■■□□□ 1.61
CAPN1-226ENST00000533820 CHD1O14646 1710 aa25.12■■□□□ 1.61
CAPN1-226ENST00000533820 DDRGK1Q96HY6 314 aa25.12■■□□□ 1.61
CAPN1-226ENST00000533820 PPM1GO15355 546 aaPredicted RBP25.12■■□□□ 1.61
CAPN1-226ENST00000533820 ATP10AO60312 1499 aa25.11■■□□□ 1.61
CAPN1-226ENST00000533820 SENP3Q9H4L4 574 aaPredicted RBP25.11■■□□□ 1.61
CAPN1-226ENST00000533820 SCAF11Q99590 1463 aaKnown RBP25.1■■□□□ 1.61
CAPN1-226ENST00000533820 RRP7AQ9Y3A4 280 aaKnown RBP25.1■■□□□ 1.61
CAPN1-226ENST00000533820 ABCC2Q92887 1545 aa25.09■■□□□ 1.61
CAPN1-226ENST00000533820 CARD14Q9BXL6 1004 aa25.09■■□□□ 1.61
CAPN1-226ENST00000533820 ADGRF5Q8IZF2 1346 aa25.09■■□□□ 1.61
CAPN1-226ENST00000533820 INSRP06213 1382 aa25.09■■□□□ 1.61
CAPN1-226ENST00000533820 FAM161AQ3B820 660 aa25.09■■□□□ 1.61
CAPN1-226ENST00000533820 C8orf34Q49A92 452 aa25.09■■□□□ 1.61
CAPN1-226ENST00000533820 CANXP27824 592 aaKnown RBP25.08■■□□□ 1.61
CAPN1-226ENST00000533820 ASXL1Q8IXJ9 1541 aa25.07■■□□□ 1.6
CAPN1-226ENST00000533820 MADDQ8WXG6 1647 aa25.07■■□□□ 1.6
CAPN1-226ENST00000533820 VSIG10Q8N0Z9 540 aa25.06■■□□□ 1.6
CAPN1-226ENST00000533820 FRAT1Q92837 279 aaPredicted RBP25.06■■□□□ 1.6
CAPN1-226ENST00000533820 NFKBIBQ15653 356 aa25.05■■□□□ 1.6
CAPN1-226ENST00000533820 PANK1Q8TE04 598 aa25.05■■□□□ 1.6
CAPN1-226ENST00000533820 ZMYND15Q9H091 742 aa25.05■■□□□ 1.6
CAPN1-226ENST00000533820 RNF17Q9BXT8 1623 aaKnown RBP25.05■■□□□ 1.6
CAPN1-226ENST00000533820 IGHDP01880 384 aa25.04■■□□□ 1.6
CAPN1-226ENST00000533820 COG6Q9Y2V7 657 aa25.04■■□□□ 1.6
CAPN1-226ENST00000533820 USP35Q9P2H5 1018 aa25.02■■□□□ 1.6
CAPN1-226ENST00000533820 UGGT1Q9NYU2 1555 aa25.02■■□□□ 1.6
CAPN1-226ENST00000533820 TRAK1Q9UPV9 953 aa25.01■■□□□ 1.6
CAPN1-226ENST00000533820 EIF3AQ14152 1382 aaKnown RBP25.01■■□□□ 1.59
CAPN1-226ENST00000533820 BCL2L13Q9BXK5 485 aa25■■□□□ 1.59
CAPN1-226ENST00000533820 CLTCL1P53675 1640 aa25■■□□□ 1.59
CAPN1-226ENST00000533820 ABCC1P33527 1531 aa24.99■■□□□ 1.59
CAPN1-226ENST00000533820 PIK3C2GO75747 1445 aa24.99■■□□□ 1.59
CAPN1-226ENST00000533820 IQGAP1P46940 1657 aa24.99■■□□□ 1.59
CAPN1-226ENST00000533820 E9PSI1 815 aa24.99■■□□□ 1.59
CAPN1-226ENST00000533820 SCAPERQ9BY12 1400 aa24.99■■□□□ 1.59
CAPN1-226ENST00000533820 KANK1Q14678 1352 aa24.99■■□□□ 1.59
CAPN1-226ENST00000533820 TRMT2AQ8IZ69 625 aaKnown RBP24.98■■□□□ 1.59
CAPN1-226ENST00000533820 NKTRP30414 1462 aaKnown RBP24.97■■□□□ 1.59
CAPN1-226ENST00000533820 SLC12A5Q9H2X9 1139 aa24.97■■□□□ 1.59
CAPN1-226ENST00000533820 SYNMO15061 1565 aa24.97■■□□□ 1.59
CAPN1-226ENST00000533820 NUTM2DQ5VT03 806 aaPredicted RBP24.97■■□□□ 1.59
CAPN1-226ENST00000533820 TMEM132EQ6IEE7 984 aa24.96■■□□□ 1.59
CAPN1-226ENST00000533820 TRPM2O94759 1503 aa24.96■■□□□ 1.59
CAPN1-226ENST00000533820 MORC1Q86VD1 984 aa24.95■■□□□ 1.59
CAPN1-226ENST00000533820 CENPJQ9HC77 1338 aaPredicted RBP24.95■■□□□ 1.59
CAPN1-226ENST00000533820 ZCCHC11Q5TAX3 1644 aaKnown RBP24.95■■□□□ 1.58
CAPN1-226ENST00000533820 TNNQ9UQP3 1299 aa24.95■■□□□ 1.58
CAPN1-226ENST00000533820 WWC1Q8IX03 1113 aa24.94■■□□□ 1.58
CAPN1-226ENST00000533820 CLUAP1Q96AJ1 413 aa24.94■■□□□ 1.58
CAPN1-226ENST00000533820 FRAT2O75474 233 aaPredicted RBP24.92■■□□□ 1.58
CAPN1-226ENST00000533820 PTPRTO14522 1441 aa24.92■■□□□ 1.58
CAPN1-226ENST00000533820 SEC24BO95487 1268 aa24.92■■□□□ 1.58
CAPN1-226ENST00000533820 ERVK-7P63135 1459 aa24.91■■□□□ 1.58
CAPN1-226ENST00000533820 SPHKAPQ2M3C7 1700 aa24.91■■□□□ 1.58
CAPN1-226ENST00000533820 GSE1Q14687 1217 aa24.91■■□□□ 1.58
CAPN1-226ENST00000533820 GLIPR1L2Q4G1C9 344 aa24.9■■□□□ 1.58
CAPN1-226ENST00000533820 MYOM1P52179 1685 aa24.9■■□□□ 1.58
CAPN1-226ENST00000533820 SHROOM2Q13796 1616 aa24.89■■□□□ 1.58
CAPN1-226ENST00000533820 ZFYVE16Q7Z3T8 1539 aa24.89■■□□□ 1.58
CAPN1-226ENST00000533820 STAC3Q96MF2 364 aa24.88■■□□□ 1.57
CAPN1-226ENST00000533820 SAFB2Q14151 953 aaKnown RBP eCLIP24.88■■□□□ 1.57
CAPN1-226ENST00000533820 TCP11L2Q8N4U5 519 aa24.88■■□□□ 1.57
CAPN1-226ENST00000533820 GGT6Q6P531 493 aa24.87■■□□□ 1.57
CAPN1-226ENST00000533820 NPC1L1Q9UHC9 1359 aa24.87■■□□□ 1.57
CAPN1-226ENST00000533820 CEP152O94986 1710 aa24.86■■□□□ 1.57
CAPN1-226ENST00000533820 KDM5AP29375 1690 aaKnown RBP24.86■■□□□ 1.57
CAPN1-226ENST00000533820 CFAP65Q6ZU64 1925 aaKnown RBP24.86■■□□□ 1.57
CAPN1-226ENST00000533820 NSD3Q9BZ95 1437 aa24.86■■□□□ 1.57
CAPN1-226ENST00000533820 FANCAO15360 1455 aa24.85■■□□□ 1.57
CAPN1-226ENST00000533820 MTHFSP49914 203 aa24.84■■□□□ 1.57
CAPN1-226ENST00000533820 RSPH6AQ9H0K4 717 aa24.84■■□□□ 1.57
CAPN1-226ENST00000533820 RLBP1P12271 317 aa24.84■■□□□ 1.57
CAPN1-226ENST00000533820 CGNL1Q0VF96 1302 aa24.84■■□□□ 1.57
CAPN1-226ENST00000533820 SLKQ9H2G2 1235 aaPredicted RBP24.83■■□□□ 1.57
CAPN1-226ENST00000533820 RTEL1-TNFRSF6BF6WH68 1400 aa24.83■■□□□ 1.57
CAPN1-226ENST00000533820 NOS1P29475 1434 aa24.83■■□□□ 1.56
CAPN1-226ENST00000533820 PDE3AQ14432 1141 aa24.81■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms