RNA–Protein interactions for RNA: ENST00000533096.5

COPB1-209, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 4

Gene COPB1, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-209ENST00000533096 NOS1P29475 1434 aa20.18■□□□□ 0.82
COPB1-209ENST00000533096 TBX22Q9Y458 520 aa20.17■□□□□ 0.82
COPB1-209ENST00000533096 TET3O43151 1660 aa20.16■□□□□ 0.82
COPB1-209ENST00000533096 JCADQ9P266 1359 aa20.16■□□□□ 0.82
COPB1-209ENST00000533096 ATF3P18847 181 aa20.15■□□□□ 0.82
COPB1-209ENST00000533096 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.15■□□□□ 0.82
COPB1-209ENST00000533096 TRIM52Q96A61 297 aa20.15■□□□□ 0.82
COPB1-209ENST00000533096 RIMS2Q9UQ26 1411 aa20.14■□□□□ 0.81
COPB1-209ENST00000533096 NUTM2BA6NNL0 878 aaPredicted RBP20.14■□□□□ 0.81
COPB1-209ENST00000533096 NUTM2EB1AL46 878 aaPredicted RBP20.14■□□□□ 0.81
COPB1-209ENST00000533096 NUTM2AQ8IVF1 878 aaPredicted RBP20.14■□□□□ 0.81
COPB1-209ENST00000533096 LMTK2Q8IWU2 1503 aa20.13■□□□□ 0.81
COPB1-209ENST00000533096 XIRP1Q702N8 1843 aaKnown RBP20.13■□□□□ 0.81
COPB1-209ENST00000533096 ANKRD50Q9ULJ7 1429 aa20.12■□□□□ 0.81
COPB1-209ENST00000533096 PLEKHG1Q9ULL1 1385 aa20.12■□□□□ 0.81
COPB1-209ENST00000533096 ITGAEP38570 1179 aa20.12■□□□□ 0.81
COPB1-209ENST00000533096 C19orf44Q9H6X5 657 aa20.12■□□□□ 0.81
COPB1-209ENST00000533096 ROBO1Q9Y6N7 1651 aa20.12■□□□□ 0.81
COPB1-209ENST00000533096 CADPS2Q86UW7 1296 aa20.1■□□□□ 0.81
COPB1-209ENST00000533096 AMOTL2Q9Y2J4 779 aa20.1■□□□□ 0.81
COPB1-209ENST00000533096 ADGRB3O60242 1522 aa20.08■□□□□ 0.81
COPB1-209ENST00000533096 NKTRP30414 1462 aaKnown RBP20.08■□□□□ 0.81
COPB1-209ENST00000533096 ZNF772Q68DY9 489 aaPredicted RBP20.08■□□□□ 0.81
COPB1-209ENST00000533096 ZFYVE9O95405 1425 aa20.06■□□□□ 0.8
COPB1-209ENST00000533096 SPATA31A6Q5VVP1 1343 aa20.05■□□□□ 0.8
COPB1-209ENST00000533096 CROCC2H7BZ55 1655 aa20.05■□□□□ 0.8
COPB1-209ENST00000533096 RXRBP28702 533 aa20.04■□□□□ 0.8
COPB1-209ENST00000533096 UPF1Q92900 1129 aaKnown RBP eCLIP20.04■□□□□ 0.8
COPB1-209ENST00000533096 ZNF326Q5BKZ1 582 aaKnown RBP20.03■□□□□ 0.8
COPB1-209ENST00000533096 PPARGC1BQ86YN6 1023 aaKnown RBP20.03■□□□□ 0.8
COPB1-209ENST00000533096 BRINP3Q76B58 766 aa20.02■□□□□ 0.8
COPB1-209ENST00000533096 ADGRL2O95490 1459 aa20.01■□□□□ 0.79
COPB1-209ENST00000533096 RPRD2Q5VT52 1461 aaKnown RBP20.01■□□□□ 0.79
COPB1-209ENST00000533096 NUP155O75694 1391 aa20■□□□□ 0.79
COPB1-209ENST00000533096 PHLPP1O60346 1717 aa19.99■□□□□ 0.79
COPB1-209ENST00000533096 KDM5AP29375 1690 aaKnown RBP19.99■□□□□ 0.79
COPB1-209ENST00000533096 ADAMTS13Q76LX8 1427 aa19.99■□□□□ 0.79
COPB1-209ENST00000533096 NCOA3Q9Y6Q9 1424 aa19.99■□□□□ 0.79
COPB1-209ENST00000533096 NWD1Q149M9 1564 aa19.99■□□□□ 0.79
COPB1-209ENST00000533096 DDX17Q92841 729 aaKnown RBP19.98■□□□□ 0.79
COPB1-209ENST00000533096 LRP6O75581 1613 aa19.97■□□□□ 0.79
COPB1-209ENST00000533096 C8orf37Q96NL8 207 aa19.95■□□□□ 0.78
COPB1-209ENST00000533096 AFF2P51816 1311 aa19.95■□□□□ 0.78
COPB1-209ENST00000533096 LRRC59Q96AG4 307 aaKnown RBP19.94■□□□□ 0.78
COPB1-209ENST00000533096 TMEM131LA2VDJ0 1609 aa19.94■□□□□ 0.78
COPB1-209ENST00000533096 PIK3R4Q99570 1358 aa19.94■□□□□ 0.78
COPB1-209ENST00000533096 PTPRUQ92729 1446 aa19.93■□□□□ 0.78
COPB1-209ENST00000533096 QTRT2Q9H974 415 aaKnown RBP19.93■□□□□ 0.78
COPB1-209ENST00000533096 ADAMTS2O95450 1211 aa19.91■□□□□ 0.78
COPB1-209ENST00000533096 COL16A1Q07092 1604 aaPredicted RBP19.9■□□□□ 0.78
COPB1-209ENST00000533096 SETD1AO15047 1707 aaKnown RBP19.9■□□□□ 0.78
COPB1-209ENST00000533096 CHD2O14647 1828 aaKnown RBP19.9■□□□□ 0.78
COPB1-209ENST00000533096 NGLY1Q96IV0 654 aa19.89■□□□□ 0.77
COPB1-209ENST00000533096 GCC2Q8IWJ2 1684 aa19.88■□□□□ 0.77
COPB1-209ENST00000533096 METP08581 1390 aa19.88■□□□□ 0.77
COPB1-209ENST00000533096 ROCK1Q13464 1354 aa19.86■□□□□ 0.77
COPB1-209ENST00000533096 SIPA1L2Q9P2F8 1722 aaPredicted RBP19.85■□□□□ 0.77
COPB1-209ENST00000533096 RBM6P78332 1123 aaKnown RBP19.85■□□□□ 0.77
COPB1-209ENST00000533096 MYO5BQ9ULV0 1848 aa19.84■□□□□ 0.77
COPB1-209ENST00000533096 TRPM2O94759 1503 aa19.83■□□□□ 0.77
COPB1-209ENST00000533096 ORAI2Q96SN7 254 aa19.82■□□□□ 0.76
COPB1-209ENST00000533096 AHDC1Q5TGY3 1603 aaPredicted RBP19.82■□□□□ 0.76
COPB1-209ENST00000533096 MST1RQ04912 1400 aa19.81■□□□□ 0.76
COPB1-209ENST00000533096 E9PCH4 1651 aa19.81■□□□□ 0.76
COPB1-209ENST00000533096 SETD5Q9C0A6 1442 aa19.8■□□□□ 0.76
COPB1-209ENST00000533096 DIP2AQ14689 1571 aa19.79■□□□□ 0.76
COPB1-209ENST00000533096 UNC13BO14795 1591 aa19.78■□□□□ 0.76
COPB1-209ENST00000533096 ASXL1Q8IXJ9 1541 aa19.78■□□□□ 0.76
COPB1-209ENST00000533096 USP21Q9UK80 565 aa19.78■□□□□ 0.76
COPB1-209ENST00000533096 PNPLA6Q8IY17 1366 aa19.77■□□□□ 0.76
COPB1-209ENST00000533096 DCCP43146 1447 aa19.76■□□□□ 0.75
COPB1-209ENST00000533096 VGFO15240 615 aaPredicted RBP19.76■□□□□ 0.75
COPB1-209ENST00000533096 SHPRHQ149N8 1683 aa19.73■□□□□ 0.75
COPB1-209ENST00000533096 ESCO1Q5FWF5 840 aa19.73■□□□□ 0.75
COPB1-209ENST00000533096 IQGAP3Q86VI3 1631 aa19.73■□□□□ 0.75
COPB1-209ENST00000533096 ADGRL3Q9HAR2 1447 aa19.72■□□□□ 0.75
COPB1-209ENST00000533096 CDK12Q9NYV4 1490 aaPredicted RBP19.72■□□□□ 0.75
COPB1-209ENST00000533096 RGS12O14924 1447 aa19.71■□□□□ 0.75
COPB1-209ENST00000533096 NUTM2FA1L443 756 aa19.71■□□□□ 0.75
COPB1-209ENST00000533096 XPCQ01831 940 aaPredicted RBP19.71■□□□□ 0.75
COPB1-209ENST00000533096 TRPC5Q9UL62 973 aaPredicted RBP19.71■□□□□ 0.75
COPB1-209ENST00000533096 STK26Q9P289 416 aa19.7■□□□□ 0.74
COPB1-209ENST00000533096 C1orf167Q5SNV9 1468 aa19.7■□□□□ 0.74
COPB1-209ENST00000533096 SOS2Q07890 1332 aaPredicted RBP19.7■□□□□ 0.74
COPB1-209ENST00000533096 ROBO2Q9HCK4 1378 aa19.7■□□□□ 0.74
COPB1-209ENST00000533096 SETBP1Q9Y6X0 1596 aa19.68■□□□□ 0.74
COPB1-209ENST00000533096 FOXO3O43524 673 aa19.67■□□□□ 0.74
COPB1-209ENST00000533096 SLC4A1APQ9BWU0 796 aaKnown RBP19.67■□□□□ 0.74
COPB1-209ENST00000533096 RGL3Q3MIN7 710 aa19.66■□□□□ 0.74
COPB1-209ENST00000533096 FNBP4Q8N3X1 1017 aaPredicted RBP19.66■□□□□ 0.74
COPB1-209ENST00000533096 ZRANB1Q9UGI0 708 aa19.66■□□□□ 0.74
COPB1-209ENST00000533096 PLEKHG5O94827 1062 aa19.65■□□□□ 0.74
COPB1-209ENST00000533096 ATAD2Q6PL18 1390 aa19.65■□□□□ 0.74
COPB1-209ENST00000533096 NRXN3Q9Y4C0 1643 aa19.65■□□□□ 0.74
COPB1-209ENST00000533096 FOXD1Q16676 465 aa19.64■□□□□ 0.73
COPB1-209ENST00000533096 XRN1Q8IZH2 1706 aaKnown RBP19.64■□□□□ 0.73
COPB1-209ENST00000533096 RPGRIP1LQ68CZ1 1315 aa19.63■□□□□ 0.73
COPB1-209ENST00000533096 WAPLQ7Z5K2 1190 aa19.63■□□□□ 0.73
COPB1-209ENST00000533096 NPHP3Q7Z494 1330 aa19.6■□□□□ 0.73
COPB1-209ENST00000533096 NEXMIFQ5QGS0 1516 aa19.6■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 8.8 ms