RNA–Protein interactions for RNA: ENST00000532457.5

PACSIN3-209, Transcript of protein kinase C and casein kinase substrate in neurons 3, humanhuman

TSL 5

Gene PACSIN3, Length 1,845 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACSIN3-209ENST00000532457 PRAG1Q86YV5 1406 aa31.2■■■□□ 2.59
PACSIN3-209ENST00000532457 UBR1Q8IWV7 1749 aa31.2■■■□□ 2.59
PACSIN3-209ENST00000532457 TMEM131LA2VDJ0 1609 aa31.17■■■□□ 2.58
PACSIN3-209ENST00000532457 HSPA2P54652 639 aa31.12■■■□□ 2.57
PACSIN3-209ENST00000532457 NBPF1Q3BBV0 1214 aa31.12■■■□□ 2.57
PACSIN3-209ENST00000532457 RALGAPBQ86X10 1494 aa31.11■■■□□ 2.57
PACSIN3-209ENST00000532457 ADGRF5Q8IZF2 1346 aa31.11■■■□□ 2.57
PACSIN3-209ENST00000532457 STAC3Q96MF2 364 aa31.11■■■□□ 2.57
PACSIN3-209ENST00000532457 HSPA5P11021 654 aaKnown RBP31.1■■■□□ 2.57
PACSIN3-209ENST00000532457 HDGFP51858 240 aaKnown RBP31.1■■■□□ 2.57
PACSIN3-209ENST00000532457 TMEM2Q9UHN6 1383 aa31.1■■■□□ 2.57
PACSIN3-209ENST00000532457 MYO5BQ9ULV0 1848 aa31.09■■■□□ 2.57
PACSIN3-209ENST00000532457 IFT172Q9UG01 1749 aa31.09■■■□□ 2.57
PACSIN3-209ENST00000532457 TRPM1Q7Z4N2 1603 aa31.07■■■□□ 2.56
PACSIN3-209ENST00000532457 SLIT1O75093 1534 aa31.07■■■□□ 2.56
PACSIN3-209ENST00000532457 EID1Q9Y6B2 187 aa31.07■■■□□ 2.56
PACSIN3-209ENST00000532457 RPGRIP1LQ68CZ1 1315 aa31.07■■■□□ 2.56
PACSIN3-209ENST00000532457 EIF4G2P78344 907 aaKnown RBP eCLIP31.06■■■□□ 2.56
PACSIN3-209ENST00000532457 ANKLE2Q86XL3 938 aa31.06■■■□□ 2.56
PACSIN3-209ENST00000532457 NUTM2DQ5VT03 806 aaPredicted RBP31.05■■■□□ 2.56
PACSIN3-209ENST00000532457 ARHGAP23Q9P227 1491 aa31.05■■■□□ 2.56
PACSIN3-209ENST00000532457 ABCF1Q8NE71 845 aaKnown RBP eCLIP31.04■■■□□ 2.56
PACSIN3-209ENST00000532457 MYOM2P54296 1465 aa31.03■■■□□ 2.56
PACSIN3-209ENST00000532457 PPLO60437 1756 aa31.03■■■□□ 2.56
PACSIN3-209ENST00000532457 CARD11Q9BXL7 1154 aa31.03■■■□□ 2.56
PACSIN3-209ENST00000532457 TXNDC2Q86VQ3 553 aa31.02■■■□□ 2.56
PACSIN3-209ENST00000532457 ROCK2O75116 1388 aaKnown RBP31.02■■■□□ 2.56
PACSIN3-209ENST00000532457 RIMS2Q9UQ26 1411 aa31.02■■■□□ 2.56
PACSIN3-209ENST00000532457 NRXN1Q9ULB1 1477 aa31■■■□□ 2.55
PACSIN3-209ENST00000532457 NEXMIFQ5QGS0 1516 aa31■■■□□ 2.55
PACSIN3-209ENST00000532457 ZFYVE9O95405 1425 aa30.99■■■□□ 2.55
PACSIN3-209ENST00000532457 GPRASP1Q5JY77 1395 aa30.98■■■□□ 2.55
PACSIN3-209ENST00000532457 SCAF11Q99590 1463 aaKnown RBP30.97■■■□□ 2.55
PACSIN3-209ENST00000532457 CFAP70Q5T0N1 1121 aa30.97■■■□□ 2.55
PACSIN3-209ENST00000532457 VGFO15240 615 aaPredicted RBP30.96■■■□□ 2.55
PACSIN3-209ENST00000532457 LTKP29376 864 aa30.96■■■□□ 2.55
PACSIN3-209ENST00000532457 USP47Q96K76 1375 aa30.96■■■□□ 2.55
PACSIN3-209ENST00000532457 NCKAP5LQ9HCH0 1330 aa30.94■■■□□ 2.54
PACSIN3-209ENST00000532457 POLR1AO95602 1720 aaPredicted RBP30.94■■■□□ 2.54
PACSIN3-209ENST00000532457 PIK3C2GO75747 1445 aa30.91■■■□□ 2.54
PACSIN3-209ENST00000532457 C11orf95C9JLR9 678 aaPredicted RBP30.91■■■□□ 2.54
PACSIN3-209ENST00000532457 DIEXFQ68CQ4 756 aaKnown RBP30.91■■■□□ 2.54
PACSIN3-209ENST00000532457 DMRT2Q9Y5R5 561 aa30.91■■■□□ 2.54
PACSIN3-209ENST00000532457 STRCQ7RTU9 1775 aa30.9■■■□□ 2.54
PACSIN3-209ENST00000532457 MED14O60244 1454 aa30.9■■■□□ 2.54
PACSIN3-209ENST00000532457 C14orf93Q9H972 538 aaKnown RBP30.89■■■□□ 2.53
PACSIN3-209ENST00000532457 SENP3Q9H4L4 574 aaPredicted RBP30.88■■■□□ 2.53
PACSIN3-209ENST00000532457 PLEKHG1Q9ULL1 1385 aa30.87■■■□□ 2.53
PACSIN3-209ENST00000532457 ST20-MTHFSA0A0A6YYL1 179 aa30.87■■■□□ 2.53
PACSIN3-209ENST00000532457 BCANQ96GW7 911 aa30.87■■■□□ 2.53
PACSIN3-209ENST00000532457 KIAA1210Q9ULL0 1709 aa30.86■■■□□ 2.53
PACSIN3-209ENST00000532457 NPHP4O75161 1426 aaPredicted RBP30.86■■■□□ 2.53
PACSIN3-209ENST00000532457 LAMC1P11047 1609 aa30.85■■■□□ 2.53
PACSIN3-209ENST00000532457 IQGAP1P46940 1657 aa30.82■■■□□ 2.52
PACSIN3-209ENST00000532457 WASHC2AQ641Q2 1341 aa30.8■■■□□ 2.52
PACSIN3-209ENST00000532457 TMEM132EQ6IEE7 984 aa30.8■■■□□ 2.52
PACSIN3-209ENST00000532457 DDX10Q13206 875 aaKnown RBP30.77■■■□□ 2.52
PACSIN3-209ENST00000532457 SETBP1Q9Y6X0 1596 aa30.76■■■□□ 2.51
PACSIN3-209ENST00000532457 ADGRB1O14514 1584 aa30.75■■■□□ 2.51
PACSIN3-209ENST00000532457 SLC26A8Q96RN1 970 aa30.73■■■□□ 2.51
PACSIN3-209ENST00000532457 TESK2Q96S53 571 aa30.73■■■□□ 2.51
PACSIN3-209ENST00000532457 TBX22Q9Y458 520 aa30.73■■■□□ 2.51
PACSIN3-209ENST00000532457 DIP2AQ14689 1571 aa30.71■■■□□ 2.51
PACSIN3-209ENST00000532457 KIF7Q2M1P5 1343 aa30.71■■■□□ 2.51
PACSIN3-209ENST00000532457 CCDC7Q96M83 1385 aa30.71■■■□□ 2.51
PACSIN3-209ENST00000532457 ADAMTS13Q76LX8 1427 aa30.7■■■□□ 2.5
PACSIN3-209ENST00000532457 NRXN3Q9Y4C0 1643 aa30.69■■■□□ 2.5
PACSIN3-209ENST00000532457 ALKQ9UM73 1620 aa30.68■■■□□ 2.5
PACSIN3-209ENST00000532457 TRAK1Q9UPV9 953 aa30.67■■■□□ 2.5
PACSIN3-209ENST00000532457 ASXL1Q8IXJ9 1541 aa30.67■■■□□ 2.5
PACSIN3-209ENST00000532457 PIK3R4Q99570 1358 aa30.64■■■□□ 2.49
PACSIN3-209ENST00000532457 STK26Q9P289 416 aa30.59■■■□□ 2.49
PACSIN3-209ENST00000532457 SETD1AO15047 1707 aaKnown RBP30.58■■■□□ 2.49
PACSIN3-209ENST00000532457 DISP3Q9P2K9 1392 aa30.58■■■□□ 2.49
PACSIN3-209ENST00000532457 METP08581 1390 aa30.57■■■□□ 2.48
PACSIN3-209ENST00000532457 EIF3AQ14152 1382 aaKnown RBP30.56■■■□□ 2.48
PACSIN3-209ENST00000532457 MIER1Q8N108 512 aa30.56■■■□□ 2.48
PACSIN3-209ENST00000532457 POLR3GLQ9BT43 218 aa30.56■■■□□ 2.48
PACSIN3-209ENST00000532457 KCNA6P17658 529 aa30.54■■■□□ 2.48
PACSIN3-209ENST00000532457 YTHDC2Q9H6S0 1430 aaKnown RBP30.54■■■□□ 2.48
PACSIN3-209ENST00000532457 ZNF335Q9H4Z2 1342 aaPredicted RBP30.52■■■□□ 2.48
PACSIN3-209ENST00000532457 CENPJQ9HC77 1338 aaPredicted RBP30.52■■■□□ 2.48
PACSIN3-209ENST00000532457 CHD2O14647 1828 aaKnown RBP30.52■■■□□ 2.48
PACSIN3-209ENST00000532457 TMF1P82094 1093 aa30.51■■■□□ 2.47
PACSIN3-209ENST00000532457 AMOTL2Q9Y2J4 779 aa30.51■■■□□ 2.47
PACSIN3-209ENST00000532457 ARHGEF28Q8N1W1 1705 aaKnown RBP30.48■■■□□ 2.47
PACSIN3-209ENST00000532457 LRPPRCP42704 1394 aaKnown RBP30.47■■■□□ 2.47
PACSIN3-209ENST00000532457 PTPRUQ92729 1446 aa30.47■■■□□ 2.47
PACSIN3-209ENST00000532457 NWD1Q149M9 1564 aa30.47■■■□□ 2.47
PACSIN3-209ENST00000532457 SAFB2Q14151 953 aaKnown RBP eCLIP30.44■■■□□ 2.46
PACSIN3-209ENST00000532457 NKTRP30414 1462 aaKnown RBP30.44■■■□□ 2.46
PACSIN3-209ENST00000532457 ABCC11Q96J66 1382 aa30.43■■■□□ 2.46
PACSIN3-209ENST00000532457 PRAM1Q96QH2 718 aa30.43■■■□□ 2.46
PACSIN3-209ENST00000532457 CPS1P31327 1500 aa30.43■■■□□ 2.46
PACSIN3-209ENST00000532457 SBNO2Q9Y2G9 1366 aa30.43■■■□□ 2.46
PACSIN3-209ENST00000532457 XRN1Q8IZH2 1706 aaKnown RBP30.42■■■□□ 2.46
PACSIN3-209ENST00000532457 QRICH2Q9H0J4 1663 aa30.41■■■□□ 2.46
PACSIN3-209ENST00000532457 STRCP1A6NGW2 1772 aa30.41■■■□□ 2.46
PACSIN3-209ENST00000532457 WAPLQ7Z5K2 1190 aa30.4■■■□□ 2.46
PACSIN3-209ENST00000532457 TECPR2O15040 1411 aa30.39■■■□□ 2.46
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms