RNA–Protein interactions for RNA: ENST00000531709.6

NXF1-211, Transcript of nuclear RNA export factor 1, humanhuman

TSL 1 (best) BASIC

Gene NXF1, Length 4,128 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-211ENST00000531709 SLC24A1O60721 1099 aa14.49□□□□□ -0.09
NXF1-211ENST00000531709 PBRM1Q86U86 1689 aa14.49□□□□□ -0.09
NXF1-211ENST00000531709 MAPK8IP3Q9UPT6 1336 aa14.49□□□□□ -0.09
NXF1-211ENST00000531709 UHRF1BP1Q6BDS2 1440 aa14.49□□□□□ -0.09
NXF1-211ENST00000531709 SRPK2P78362 688 aaKnown RBP14.48□□□□□ -0.09
NXF1-211ENST00000531709 CGNL1Q0VF96 1302 aa14.48□□□□□ -0.09
NXF1-211ENST00000531709 TMEM132EQ6IEE7 984 aa14.48□□□□□ -0.09
NXF1-211ENST00000531709 BCORL1Q5H9F3 1711 aa14.48□□□□□ -0.09
NXF1-211ENST00000531709 MFAP1P55081 439 aaKnown RBP14.47□□□□□ -0.09
NXF1-211ENST00000531709 ITPRIPQ8IWB1 547 aa14.47□□□□□ -0.09
NXF1-211ENST00000531709 RWDD1Q9H446 243 aaPredicted RBP14.47□□□□□ -0.09
NXF1-211ENST00000531709 PMFBP1Q8TBY8 1022 aa14.46□□□□□ -0.09
NXF1-211ENST00000531709 SLC12A5Q9H2X9 1139 aa14.46□□□□□ -0.09
NXF1-211ENST00000531709 SMC4Q9NTJ3 1288 aa14.46□□□□□ -0.1
NXF1-211ENST00000531709 PLEKHH1Q9ULM0 1364 aa14.45□□□□□ -0.1
NXF1-211ENST00000531709 TCP11L2Q8N4U5 519 aa14.45□□□□□ -0.1
NXF1-211ENST00000531709 AMER1Q5JTC6 1135 aaPredicted RBP14.45□□□□□ -0.1
NXF1-211ENST00000531709 ADGRL2O95490 1459 aa14.45□□□□□ -0.1
NXF1-211ENST00000531709 ITSN2Q9NZM3 1697 aa14.45□□□□□ -0.1
NXF1-211ENST00000531709 KDM5CP41229 1560 aa14.45□□□□□ -0.1
NXF1-211ENST00000531709 SPINK5Q9NQ38 1064 aaPredicted RBP14.44□□□□□ -0.1
NXF1-211ENST00000531709 FAM135AQ9P2D6 1515 aa14.44□□□□□ -0.1
NXF1-211ENST00000531709 POGKQ9P215 609 aa14.44□□□□□ -0.1
NXF1-211ENST00000531709 MTHFSP49914 203 aa14.43□□□□□ -0.1
NXF1-211ENST00000531709 MYH16Q9H6N6 1097 aa14.43□□□□□ -0.1
NXF1-211ENST00000531709 IGHDP01880 384 aa14.42□□□□□ -0.1
NXF1-211ENST00000531709 ARHGEF12Q9NZN5 1544 aa14.42□□□□□ -0.1
NXF1-211ENST00000531709 MBD5Q9P267 1494 aa14.42□□□□□ -0.1
NXF1-211ENST00000531709 WWC1Q8IX03 1113 aa14.41□□□□□ -0.1
NXF1-211ENST00000531709 RUNDC1Q96C34 613 aa14.41□□□□□ -0.1
NXF1-211ENST00000531709 C8orf34Q49A92 452 aa14.4□□□□□ -0.1
NXF1-211ENST00000531709 A2MP01023 1474 aa14.39□□□□□ -0.11
NXF1-211ENST00000531709 PDE3AQ14432 1141 aa14.38□□□□□ -0.11
NXF1-211ENST00000531709 HSCBQ8IWL3 235 aa14.38□□□□□ -0.11
NXF1-211ENST00000531709 ADGRF5Q8IZF2 1346 aa14.38□□□□□ -0.11
NXF1-211ENST00000531709 SYCP2Q9BX26 1530 aa14.38□□□□□ -0.11
NXF1-211ENST00000531709 ZKSCAN2Q63HK3 967 aa14.38□□□□□ -0.11
NXF1-211ENST00000531709 TSR2Q969E8 191 aaKnown RBP14.38□□□□□ -0.11
NXF1-211ENST00000531709 PDZRN3Q9UPQ7 1066 aa14.38□□□□□ -0.11
NXF1-211ENST00000531709 DMRT2Q9Y5R5 561 aa14.37□□□□□ -0.11
NXF1-211ENST00000531709 ELL2O00472 640 aaPredicted RBP14.37□□□□□ -0.11
NXF1-211ENST00000531709 FOXD4L1Q9NU39 408 aa14.37□□□□□ -0.11
NXF1-211ENST00000531709 CABP2Q9NPB3 220 aa14.36□□□□□ -0.11
NXF1-211ENST00000531709 EIF4G3O43432 1585 aaKnown RBP14.36□□□□□ -0.11
NXF1-211ENST00000531709 COL17A1Q9UMD9 1497 aaPredicted RBP14.36□□□□□ -0.11
NXF1-211ENST00000531709 HSP90AB1P08238 724 aaKnown RBP14.36□□□□□ -0.11
NXF1-211ENST00000531709 GGNBP2Q9H3C7 697 aa14.36□□□□□ -0.11
NXF1-211ENST00000531709 DZIP1LQ8IYY4 767 aaKnown RBP14.35□□□□□ -0.11
NXF1-211ENST00000531709 STAC3Q96MF2 364 aa14.35□□□□□ -0.11
NXF1-211ENST00000531709 SCAPERQ9BY12 1400 aa14.35□□□□□ -0.11
NXF1-211ENST00000531709 SHANK2Q9UPX8 1470 aa14.35□□□□□ -0.11
NXF1-211ENST00000531709 TNNQ9UQP3 1299 aa14.34□□□□□ -0.11
NXF1-211ENST00000531709 NKTRP30414 1462 aaKnown RBP14.34□□□□□ -0.11
NXF1-211ENST00000531709 KDM2BQ8NHM5 1336 aa14.34□□□□□ -0.11
NXF1-211ENST00000531709 L1TD1Q5T7N2 865 aaKnown RBP14.34□□□□□ -0.11
NXF1-211ENST00000531709 NGEFQ8N5V2 710 aa14.34□□□□□ -0.11
NXF1-211ENST00000531709 SEC24BO95487 1268 aa14.33□□□□□ -0.12
NXF1-211ENST00000531709 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.33□□□□□ -0.12
NXF1-211ENST00000531709 NAP1L5Q96NT1 182 aaPredicted RBP14.33□□□□□ -0.12
NXF1-211ENST00000531709 CARD14Q9BXL6 1004 aa14.33□□□□□ -0.12
NXF1-211ENST00000531709 CEP170Q5SW79 1584 aa14.33□□□□□ -0.12
NXF1-211ENST00000531709 ADGBQ8N7X0 1667 aa14.33□□□□□ -0.12
NXF1-211ENST00000531709 NCLP19338 710 aaKnown RBP14.32□□□□□ -0.12
NXF1-211ENST00000531709 RARSP54136 660 aaKnown RBP14.32□□□□□ -0.12
NXF1-211ENST00000531709 MINK1Q8N4C8 1332 aaPredicted RBP14.32□□□□□ -0.12
NXF1-211ENST00000531709 APBB1O00213 710 aa14.32□□□□□ -0.12
NXF1-211ENST00000531709 EXOSC9Q06265 439 aaKnown RBP14.31□□□□□ -0.12
NXF1-211ENST00000531709 TRIM44Q96DX7 344 aaPredicted RBP14.31□□□□□ -0.12
NXF1-211ENST00000531709 GOLGA6L3A6NEY3 463 aa14.31□□□□□ -0.12
NXF1-211ENST00000531709 IPO8O15397 1037 aaKnown RBP14.31□□□□□ -0.12
NXF1-211ENST00000531709 ANP32BQ92688 251 aaKnown RBP14.31□□□□□ -0.12
NXF1-211ENST00000531709 ABCC10Q5T3U5 1492 aa14.31□□□□□ -0.12
NXF1-211ENST00000531709 EVC2Q86UK5 1308 aa14.31□□□□□ -0.12
NXF1-211ENST00000531709 RIPK4P57078 832 aa14.3□□□□□ -0.12
NXF1-211ENST00000531709 LNPKQ9C0E8 428 aa14.3□□□□□ -0.12
NXF1-211ENST00000531709 BLMP54132 1417 aaPredicted RBP14.3□□□□□ -0.12
NXF1-211ENST00000531709 SCAF11Q99590 1463 aaKnown RBP14.3□□□□□ -0.12
NXF1-211ENST00000531709 GPRASP1Q5JY77 1395 aa14.3□□□□□ -0.12
NXF1-211ENST00000531709 C22orf23Q9BZE7 217 aa14.3□□□□□ -0.12
NXF1-211ENST00000531709 NSD3Q9BZ95 1437 aa14.3□□□□□ -0.12
NXF1-211ENST00000531709 PCDHB15Q9Y5E8 787 aa14.29□□□□□ -0.12
NXF1-211ENST00000531709 PLPPR3Q6T4P5 718 aa14.29□□□□□ -0.12
NXF1-211ENST00000531709 MAGI2Q86UL8 1455 aa14.28□□□□□ -0.12
NXF1-211ENST00000531709 SOX12O15370 315 aa14.28□□□□□ -0.12
NXF1-211ENST00000531709 ANKRD45Q5TZF3 282 aa14.28□□□□□ -0.12
NXF1-211ENST00000531709 NUP160Q12769 1436 aa14.28□□□□□ -0.12
NXF1-211ENST00000531709 PRKCSHP14314 528 aaPredicted RBP14.28□□□□□ -0.12
NXF1-211ENST00000531709 PLA2R1Q13018 1463 aa14.28□□□□□ -0.12
NXF1-211ENST00000531709 RLBP1P12271 317 aa14.27□□□□□ -0.12
NXF1-211ENST00000531709 HDGFL2Q7Z4V5 671 aaPredicted RBP14.27□□□□□ -0.12
NXF1-211ENST00000531709 TRAPPC8Q9Y2L5 1435 aa14.27□□□□□ -0.12
NXF1-211ENST00000531709 TERF2IPQ9NYB0 399 aa14.27□□□□□ -0.12
NXF1-211ENST00000531709 ZMYM4Q5VZL5 1548 aa14.27□□□□□ -0.13
NXF1-211ENST00000531709 DDX19BQ9UMR2 479 aa14.27□□□□□ -0.13
NXF1-211ENST00000531709 VGFO15240 615 aaPredicted RBP14.26□□□□□ -0.13
NXF1-211ENST00000531709 ASXL1Q8IXJ9 1541 aa14.26□□□□□ -0.13
NXF1-211ENST00000531709 MVPQ14764 893 aaKnown RBP14.26□□□□□ -0.13
NXF1-211ENST00000531709 WDR63Q8IWG1 891 aa14.25□□□□□ -0.13
NXF1-211ENST00000531709 PNNQ9H307 717 aaKnown RBP14.25□□□□□ -0.13
NXF1-211ENST00000531709 GOLGA6L22H0YM25 854 aa14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 89.2 ms