RNA–Protein interactions for RNA: ENST00000530996.5

CHMP4A-204, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 3 BASIC

Gene CHMP4A, Length 967 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-204ENST00000530996 NKTRP30414 1462 aaKnown RBP24.32■■□□□ 1.48
CHMP4A-204ENST00000530996 CHGAP10645 457 aaKnown RBP24.32■■□□□ 1.48
CHMP4A-204ENST00000530996 RBM33Q96EV2 1170 aaKnown RBP24.32■■□□□ 1.48
CHMP4A-204ENST00000530996 RIMS2Q9UQ26 1411 aa24.31■■□□□ 1.48
CHMP4A-204ENST00000530996 GCC2Q8IWJ2 1684 aa24.3■■□□□ 1.48
CHMP4A-204ENST00000530996 NWD1Q149M9 1564 aa24.3■■□□□ 1.48
CHMP4A-204ENST00000530996 ITGAEP38570 1179 aa24.29■■□□□ 1.48
CHMP4A-204ENST00000530996 PLEKHG1Q9ULL1 1385 aa24.29■■□□□ 1.48
CHMP4A-204ENST00000530996 ZFYVE9O95405 1425 aa24.28■■□□□ 1.48
CHMP4A-204ENST00000530996 ROCK1Q13464 1354 aa24.28■■□□□ 1.48
CHMP4A-204ENST00000530996 MSH6P52701 1360 aa24.27■■□□□ 1.48
CHMP4A-204ENST00000530996 FAM135BQ49AJ0 1406 aa24.27■■□□□ 1.48
CHMP4A-204ENST00000530996 HDGFP51858 240 aaKnown RBP24.26■■□□□ 1.47
CHMP4A-204ENST00000530996 TMEM131LA2VDJ0 1609 aa24.24■■□□□ 1.47
CHMP4A-204ENST00000530996 ROBO1Q9Y6N7 1651 aa24.23■■□□□ 1.47
CHMP4A-204ENST00000530996 E9PCH4 1651 aa24.22■■□□□ 1.47
CHMP4A-204ENST00000530996 IQGAP3Q86VI3 1631 aa24.22■■□□□ 1.47
CHMP4A-204ENST00000530996 PPARGC1BQ86YN6 1023 aaKnown RBP24.22■■□□□ 1.47
CHMP4A-204ENST00000530996 MYO5BQ9ULV0 1848 aa24.21■■□□□ 1.47
CHMP4A-204ENST00000530996 NUP155O75694 1391 aa24.21■■□□□ 1.47
CHMP4A-204ENST00000530996 NUTM2DQ5VT03 806 aaPredicted RBP24.21■■□□□ 1.47
CHMP4A-204ENST00000530996 ABCF1Q8NE71 845 aaKnown RBP eCLIP24.21■■□□□ 1.47
CHMP4A-204ENST00000530996 C14orf37Q86TY3 774 aa24.2■■□□□ 1.46
CHMP4A-204ENST00000530996 DIP2AQ14689 1571 aa24.16■■□□□ 1.46
CHMP4A-204ENST00000530996 SLAIN2Q9P270 581 aa24.13■■□□□ 1.45
CHMP4A-204ENST00000530996 TBX22Q9Y458 520 aa24.12■■□□□ 1.45
CHMP4A-204ENST00000530996 ADAMTS13Q76LX8 1427 aa24.11■■□□□ 1.45
CHMP4A-204ENST00000530996 CHD2O14647 1828 aaKnown RBP24.1■■□□□ 1.45
CHMP4A-204ENST00000530996 TRPM2O94759 1503 aa24.1■■□□□ 1.45
CHMP4A-204ENST00000530996 PHLPP1O60346 1717 aa24.09■■□□□ 1.45
CHMP4A-204ENST00000530996 RGS17Q9UGC6 210 aaPredicted RBP24.08■■□□□ 1.45
CHMP4A-204ENST00000530996 PIK3R4Q99570 1358 aa24.07■■□□□ 1.44
CHMP4A-204ENST00000530996 ZNF326Q5BKZ1 582 aaKnown RBP24.06■■□□□ 1.44
CHMP4A-204ENST00000530996 NCOA3Q9Y6Q9 1424 aa24.06■■□□□ 1.44
CHMP4A-204ENST00000530996 JCADQ9P266 1359 aa24.05■■□□□ 1.44
CHMP4A-204ENST00000530996 ATF3P18847 181 aa24.04■■□□□ 1.44
CHMP4A-204ENST00000530996 SPHKAPQ2M3C7 1700 aa24.04■■□□□ 1.44
CHMP4A-204ENST00000530996 CADPS2Q86UW7 1296 aa24.02■■□□□ 1.44
CHMP4A-204ENST00000530996 AMOTL2Q9Y2J4 779 aa24.01■■□□□ 1.43
CHMP4A-204ENST00000530996 COL16A1Q07092 1604 aaPredicted RBP24■■□□□ 1.43
CHMP4A-204ENST00000530996 PTPRUQ92729 1446 aa24■■□□□ 1.43
CHMP4A-204ENST00000530996 POTEAQ6S8J7 498 aa23.99■■□□□ 1.43
CHMP4A-204ENST00000530996 C19orf44Q9H6X5 657 aa23.99■■□□□ 1.43
CHMP4A-204ENST00000530996 SIPA1L2Q9P2F8 1722 aaPredicted RBP23.98■■□□□ 1.43
CHMP4A-204ENST00000530996 SETBP1Q9Y6X0 1596 aa23.98■■□□□ 1.43
CHMP4A-204ENST00000530996 MEX3CQ5U5Q3 659 aaKnown RBP23.97■■□□□ 1.43
CHMP4A-204ENST00000530996 RRBP1Q9P2E9 1410 aaKnown RBP23.96■■□□□ 1.43
CHMP4A-204ENST00000530996 CLTCL1P53675 1640 aa23.95■■□□□ 1.42
CHMP4A-204ENST00000530996 AHDC1Q5TGY3 1603 aaPredicted RBP23.95■■□□□ 1.42
CHMP4A-204ENST00000530996 NRXN3Q9Y4C0 1643 aa23.95■■□□□ 1.42
CHMP4A-204ENST00000530996 DCCP43146 1447 aa23.93■■□□□ 1.42
CHMP4A-204ENST00000530996 XRN1Q8IZH2 1706 aaKnown RBP23.93■■□□□ 1.42
CHMP4A-204ENST00000530996 NAIPQ13075 1403 aa23.92■■□□□ 1.42
CHMP4A-204ENST00000530996 SPATA31A6Q5VVP1 1343 aa23.91■■□□□ 1.42
CHMP4A-204ENST00000530996 TRIM52Q96A61 297 aa23.91■■□□□ 1.42
CHMP4A-204ENST00000530996 LRP6O75581 1613 aa23.91■■□□□ 1.42
CHMP4A-204ENST00000530996 METP08581 1390 aa23.91■■□□□ 1.42
CHMP4A-204ENST00000530996 NEXMIFQ5QGS0 1516 aa23.9■■□□□ 1.42
CHMP4A-204ENST00000530996 BRINP3Q76B58 766 aa23.9■■□□□ 1.42
CHMP4A-204ENST00000530996 ASXL1Q8IXJ9 1541 aa23.89■■□□□ 1.41
CHMP4A-204ENST00000530996 SHPRHQ149N8 1683 aa23.86■■□□□ 1.41
CHMP4A-204ENST00000530996 MST1RQ04912 1400 aa23.85■■□□□ 1.41
CHMP4A-204ENST00000530996 ADGRL3Q9HAR2 1447 aa23.85■■□□□ 1.41
CHMP4A-204ENST00000530996 HFM1A2PYH4 1435 aa23.84■■□□□ 1.41
CHMP4A-204ENST00000530996 SETD1AO15047 1707 aaKnown RBP23.84■■□□□ 1.41
CHMP4A-204ENST00000530996 NUTM2BA6NNL0 878 aaPredicted RBP23.84■■□□□ 1.41
CHMP4A-204ENST00000530996 NUTM2EB1AL46 878 aaPredicted RBP23.84■■□□□ 1.41
CHMP4A-204ENST00000530996 NUTM2AQ8IVF1 878 aaPredicted RBP23.84■■□□□ 1.41
CHMP4A-204ENST00000530996 KIF1BO60333 1816 aa23.82■■□□□ 1.4
CHMP4A-204ENST00000530996 ZNF772Q68DY9 489 aaPredicted RBP23.81■■□□□ 1.4
CHMP4A-204ENST00000530996 SLC4A1APQ9BWU0 796 aaKnown RBP23.81■■□□□ 1.4
CHMP4A-204ENST00000530996 NALCNQ8IZF0 1738 aa23.79■■□□□ 1.4
CHMP4A-204ENST00000530996 PTCH1Q13635 1447 aa23.77■■□□□ 1.4
CHMP4A-204ENST00000530996 VGFO15240 615 aaPredicted RBP23.77■■□□□ 1.4
CHMP4A-204ENST00000530996 NHSL1Q5SYE7 1610 aa23.76■■□□□ 1.39
CHMP4A-204ENST00000530996 SETD5Q9C0A6 1442 aa23.76■■□□□ 1.39
CHMP4A-204ENST00000530996 DDX17Q92841 729 aaKnown RBP23.74■■□□□ 1.39
CHMP4A-204ENST00000530996 LRRC59Q96AG4 307 aaKnown RBP23.72■■□□□ 1.39
CHMP4A-204ENST00000530996 ROBO2Q9HCK4 1378 aa23.72■■□□□ 1.39
CHMP4A-204ENST00000530996 C1orf167Q5SNV9 1468 aa23.72■■□□□ 1.39
CHMP4A-204ENST00000530996 AFF2P51816 1311 aa23.71■■□□□ 1.39
CHMP4A-204ENST00000530996 RPGRIP1LQ68CZ1 1315 aa23.71■■□□□ 1.39
CHMP4A-204ENST00000530996 PNPLA6Q8IY17 1366 aa23.69■■□□□ 1.38
CHMP4A-204ENST00000530996 FOXD1Q16676 465 aa23.69■■□□□ 1.38
CHMP4A-204ENST00000530996 CCDC144AA2RUR9 1427 aa23.68■■□□□ 1.38
CHMP4A-204ENST00000530996 RXRBP28702 533 aa23.68■■□□□ 1.38
CHMP4A-204ENST00000530996 C8orf37Q96NL8 207 aa23.68■■□□□ 1.38
CHMP4A-204ENST00000530996 PPLO60437 1756 aa23.65■■□□□ 1.38
CHMP4A-204ENST00000530996 PRAG1Q86YV5 1406 aa23.64■■□□□ 1.37
CHMP4A-204ENST00000530996 ORAI2Q96SN7 254 aa23.63■■□□□ 1.37
CHMP4A-204ENST00000530996 ADAMTS2O95450 1211 aa23.62■■□□□ 1.37
CHMP4A-204ENST00000530996 RGL3Q3MIN7 710 aa23.61■■□□□ 1.37
CHMP4A-204ENST00000530996 CDK12Q9NYV4 1490 aaPredicted RBP23.61■■□□□ 1.37
CHMP4A-204ENST00000530996 ADGRF5Q8IZF2 1346 aa23.59■■□□□ 1.37
CHMP4A-204ENST00000530996 STK26Q9P289 416 aa23.59■■□□□ 1.37
CHMP4A-204ENST00000530996 CDC42BPGQ6DT37 1551 aa23.59■■□□□ 1.37
CHMP4A-204ENST00000530996 UPF1Q92900 1129 aaKnown RBP eCLIP23.58■■□□□ 1.37
CHMP4A-204ENST00000530996 NGLY1Q96IV0 654 aa23.57■■□□□ 1.36
CHMP4A-204ENST00000530996 LAMC1P11047 1609 aa23.56■■□□□ 1.36
CHMP4A-204ENST00000530996 ANKRD30BQ9BXX2 1392 aa23.56■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms