RNA–Protein interactions for RNA: ENST00000530579.6

NEDD8-MDP1-201, Transcript of NEDD8-MDP1 readthrough, humanhuman

TSL 2

Gene NEDD8-MDP1, Length 471 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-MDP1-201ENST00000530579 RIMS2Q9UQ26 1411 aa12.07□□□□□ -0.48
NEDD8-MDP1-201ENST00000530579 EID1Q9Y6B2 187 aa12.07□□□□□ -0.48
NEDD8-MDP1-201ENST00000530579 KIF1BO60333 1816 aa12.07□□□□□ -0.48
NEDD8-MDP1-201ENST00000530579 PRAG1Q86YV5 1406 aa12.06□□□□□ -0.48
NEDD8-MDP1-201ENST00000530579 TMEM131LA2VDJ0 1609 aa12.06□□□□□ -0.48
NEDD8-MDP1-201ENST00000530579 TMEM2Q9UHN6 1383 aa12.05□□□□□ -0.48
NEDD8-MDP1-201ENST00000530579 CFAP70Q5T0N1 1121 aa12.05□□□□□ -0.48
NEDD8-MDP1-201ENST00000530579 NBPF1Q3BBV0 1214 aa12.04□□□□□ -0.48
NEDD8-MDP1-201ENST00000530579 CARD11Q9BXL7 1154 aa12.04□□□□□ -0.48
NEDD8-MDP1-201ENST00000530579 MYOM2P54296 1465 aa12.03□□□□□ -0.48
NEDD8-MDP1-201ENST00000530579 ROCK2O75116 1388 aaKnown RBP12.03□□□□□ -0.48
NEDD8-MDP1-201ENST00000530579 ZFYVE9O95405 1425 aa12.03□□□□□ -0.48
NEDD8-MDP1-201ENST00000530579 NEXMIFQ5QGS0 1516 aa12.02□□□□□ -0.48
NEDD8-MDP1-201ENST00000530579 LTKP29376 864 aa12.02□□□□□ -0.49
NEDD8-MDP1-201ENST00000530579 ANKLE2Q86XL3 938 aa12.02□□□□□ -0.49
NEDD8-MDP1-201ENST00000530579 C14orf93Q9H972 538 aaKnown RBP12.02□□□□□ -0.49
NEDD8-MDP1-201ENST00000530579 MYO3AQ8NEV4 1616 aa12.01□□□□□ -0.49
NEDD8-MDP1-201ENST00000530579 EIF4G2P78344 907 aaKnown RBP eCLIP12.01□□□□□ -0.49
NEDD8-MDP1-201ENST00000530579 CEP170BQ9Y4F5 1589 aaPredicted RBP12.01□□□□□ -0.49
NEDD8-MDP1-201ENST00000530579 TMEM132EQ6IEE7 984 aa12□□□□□ -0.49
NEDD8-MDP1-201ENST00000530579 HIRIP3Q9BW71 556 aaPredicted RBP11.99□□□□□ -0.49
NEDD8-MDP1-201ENST00000530579 PIK3C2GO75747 1445 aa11.99□□□□□ -0.49
NEDD8-MDP1-201ENST00000530579 RALGAPBQ86X10 1494 aa11.99□□□□□ -0.49
NEDD8-MDP1-201ENST00000530579 NRXN1Q9ULB1 1477 aa11.99□□□□□ -0.49
NEDD8-MDP1-201ENST00000530579 UBR1Q8IWV7 1749 aa11.99□□□□□ -0.49
NEDD8-MDP1-201ENST00000530579 ZNF316A6NFI3 1004 aaPredicted RBP11.98□□□□□ -0.49
NEDD8-MDP1-201ENST00000530579 HSPA5P11021 654 aaKnown RBP11.98□□□□□ -0.49
NEDD8-MDP1-201ENST00000530579 HSPA2P54652 639 aa11.98□□□□□ -0.49
NEDD8-MDP1-201ENST00000530579 KDM5AP29375 1690 aaKnown RBP11.97□□□□□ -0.49
NEDD8-MDP1-201ENST00000530579 ARHGAP23Q9P227 1491 aa11.97□□□□□ -0.49
NEDD8-MDP1-201ENST00000530579 NCKAP5LQ9HCH0 1330 aa11.97□□□□□ -0.49
NEDD8-MDP1-201ENST00000530579 SLC26A8Q96RN1 970 aa11.97□□□□□ -0.49
NEDD8-MDP1-201ENST00000530579 STK26Q9P289 416 aa11.97□□□□□ -0.49
NEDD8-MDP1-201ENST00000530579 SLIT1O75093 1534 aa11.96□□□□□ -0.49
NEDD8-MDP1-201ENST00000530579 PLEKHG1Q9ULL1 1385 aa11.96□□□□□ -0.49
NEDD8-MDP1-201ENST00000530579 PPLO60437 1756 aa11.96□□□□□ -0.49
NEDD8-MDP1-201ENST00000530579 SCAF11Q99590 1463 aaKnown RBP11.95□□□□□ -0.5
NEDD8-MDP1-201ENST00000530579 MYO5BQ9ULV0 1848 aa11.95□□□□□ -0.5
NEDD8-MDP1-201ENST00000530579 GPRASP1Q5JY77 1395 aa11.95□□□□□ -0.5
NEDD8-MDP1-201ENST00000530579 USP47Q96K76 1375 aa11.95□□□□□ -0.5
NEDD8-MDP1-201ENST00000530579 IFT172Q9UG01 1749 aa11.95□□□□□ -0.5
NEDD8-MDP1-201ENST00000530579 TRAK1Q9UPV9 953 aa11.95□□□□□ -0.5
NEDD8-MDP1-201ENST00000530579 ST20-MTHFSA0A0A6YYL1 179 aa11.94□□□□□ -0.5
NEDD8-MDP1-201ENST00000530579 TBX22Q9Y458 520 aa11.94□□□□□ -0.5
NEDD8-MDP1-201ENST00000530579 TRPM1Q7Z4N2 1603 aa11.93□□□□□ -0.5
NEDD8-MDP1-201ENST00000530579 ZNF142P52746 1687 aaPredicted RBP11.93□□□□□ -0.5
NEDD8-MDP1-201ENST00000530579 SETD1BQ9UPS6 1966 aaKnown RBP11.92□□□□□ -0.5
NEDD8-MDP1-201ENST00000530579 ALKQ9UM73 1620 aa11.92□□□□□ -0.5
NEDD8-MDP1-201ENST00000530579 AEBP2Q6ZN18 517 aaPredicted RBP11.91□□□□□ -0.5
NEDD8-MDP1-201ENST00000530579 POGKQ9P215 609 aa11.91□□□□□ -0.5
NEDD8-MDP1-201ENST00000530579 METP08581 1390 aa11.91□□□□□ -0.5
NEDD8-MDP1-201ENST00000530579 EIF3AQ14152 1382 aaKnown RBP11.91□□□□□ -0.5
NEDD8-MDP1-201ENST00000530579 NPHP4O75161 1426 aaPredicted RBP11.9□□□□□ -0.5
NEDD8-MDP1-201ENST00000530579 ADAMTS13Q76LX8 1427 aa11.9□□□□□ -0.5
NEDD8-MDP1-201ENST00000530579 LMTK3Q96Q04 1460 aa11.89□□□□□ -0.51
NEDD8-MDP1-201ENST00000530579 SETBP1Q9Y6X0 1596 aa11.89□□□□□ -0.51
NEDD8-MDP1-201ENST00000530579 YTHDC2Q9H6S0 1430 aaKnown RBP11.89□□□□□ -0.51
NEDD8-MDP1-201ENST00000530579 LRPPRCP42704 1394 aaKnown RBP11.89□□□□□ -0.51
NEDD8-MDP1-201ENST00000530579 KIAA1210Q9ULL0 1709 aa11.89□□□□□ -0.51
NEDD8-MDP1-201ENST00000530579 CENPJQ9HC77 1338 aaPredicted RBP11.88□□□□□ -0.51
NEDD8-MDP1-201ENST00000530579 SAFB2Q14151 953 aaKnown RBP eCLIP11.88□□□□□ -0.51
NEDD8-MDP1-201ENST00000530579 PRAM1Q96QH2 718 aa11.88□□□□□ -0.51
NEDD8-MDP1-201ENST00000530579 POLR3GLQ9BT43 218 aa11.88□□□□□ -0.51
NEDD8-MDP1-201ENST00000530579 AMOTL2Q9Y2J4 779 aa11.88□□□□□ -0.51
NEDD8-MDP1-201ENST00000530579 ADGRB1O14514 1584 aa11.88□□□□□ -0.51
NEDD8-MDP1-201ENST00000530579 LAMC1P11047 1609 aa11.87□□□□□ -0.51
NEDD8-MDP1-201ENST00000530579 ABCC11Q96J66 1382 aa11.87□□□□□ -0.51
NEDD8-MDP1-201ENST00000530579 SLC24A1O60721 1099 aa11.86□□□□□ -0.51
NEDD8-MDP1-201ENST00000530579 TMF1P82094 1093 aa11.86□□□□□ -0.51
NEDD8-MDP1-201ENST00000530579 WAPLQ7Z5K2 1190 aa11.86□□□□□ -0.51
NEDD8-MDP1-201ENST00000530579 MED14O60244 1454 aa11.86□□□□□ -0.51
NEDD8-MDP1-201ENST00000530579 NRXN3Q9Y4C0 1643 aa11.86□□□□□ -0.51
NEDD8-MDP1-201ENST00000530579 C11orf95C9JLR9 678 aaPredicted RBP11.85□□□□□ -0.51
NEDD8-MDP1-201ENST00000530579 SIRT1Q96EB6 747 aa11.85□□□□□ -0.51
NEDD8-MDP1-201ENST00000530579 TESK2Q96S53 571 aa11.85□□□□□ -0.51
NEDD8-MDP1-201ENST00000530579 ASXL1Q8IXJ9 1541 aa11.85□□□□□ -0.51
NEDD8-MDP1-201ENST00000530579 IQGAP1P46940 1657 aa11.84□□□□□ -0.51
NEDD8-MDP1-201ENST00000530579 PIK3R4Q99570 1358 aa11.84□□□□□ -0.51
NEDD8-MDP1-201ENST00000530579 DMRT2Q9Y5R5 561 aa11.84□□□□□ -0.51
NEDD8-MDP1-201ENST00000530579 KCNA6P17658 529 aa11.83□□□□□ -0.52
NEDD8-MDP1-201ENST00000530579 PTPRUQ92729 1446 aa11.83□□□□□ -0.52
NEDD8-MDP1-201ENST00000530579 DIP2AQ14689 1571 aa11.83□□□□□ -0.52
NEDD8-MDP1-201ENST00000530579 MINK1Q8N4C8 1332 aaPredicted RBP11.83□□□□□ -0.52
NEDD8-MDP1-201ENST00000530579 CDCA8Q53HL2 280 aa11.82□□□□□ -0.52
NEDD8-MDP1-201ENST00000530579 KIF7Q2M1P5 1343 aa11.82□□□□□ -0.52
NEDD8-MDP1-201ENST00000530579 WASHC2AQ641Q2 1341 aa11.82□□□□□ -0.52
NEDD8-MDP1-201ENST00000530579 ROBO2Q9HCK4 1378 aa11.81□□□□□ -0.52
NEDD8-MDP1-201ENST00000530579 PLEKHH1Q9ULM0 1364 aa11.81□□□□□ -0.52
NEDD8-MDP1-201ENST00000530579 DDX10Q13206 875 aaKnown RBP11.81□□□□□ -0.52
NEDD8-MDP1-201ENST00000530579 CCDC7Q96M83 1385 aa11.8□□□□□ -0.52
NEDD8-MDP1-201ENST00000530579 PROSER2Q86WR7 435 aaPredicted RBP11.8□□□□□ -0.52
NEDD8-MDP1-201ENST00000530579 EVC2Q86UK5 1308 aa11.8□□□□□ -0.52
NEDD8-MDP1-201ENST00000530579 DISP3Q9P2K9 1392 aa11.79□□□□□ -0.52
NEDD8-MDP1-201ENST00000530579 TECPR2O15040 1411 aa11.79□□□□□ -0.52
NEDD8-MDP1-201ENST00000530579 FAM135BQ49AJ0 1406 aa11.79□□□□□ -0.52
NEDD8-MDP1-201ENST00000530579 SRPK2P78362 688 aaKnown RBP11.79□□□□□ -0.52
NEDD8-MDP1-201ENST00000530579 C14orf37Q86TY3 774 aa11.79□□□□□ -0.52
NEDD8-MDP1-201ENST00000530579 DLC1Q96QB1 1528 aa11.79□□□□□ -0.52
NEDD8-MDP1-201ENST00000530579 SETD1AO15047 1707 aaKnown RBP11.78□□□□□ -0.52
NEDD8-MDP1-201ENST00000530579 POLR1AO95602 1720 aaPredicted RBP11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms