RNA–Protein interactions for RNA: ENST00000530388.1

ARHGEF12-209, Transcript of Rho guanine nucleotide exchange factor 12, humanhuman

TSL 1 (best)

Gene ARHGEF12, Length 4,309 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF12-209ENST00000530388 GLIPR1L2Q4G1C9 344 aa5.25□□□□□ -1.57
ARHGEF12-209ENST00000530388 FAM9BQ8IZU0 186 aa5.25□□□□□ -1.57
ARHGEF12-209ENST00000530388 hCG_2014768A0A024R1R8 64 aa5.25□□□□□ -1.57
ARHGEF12-209ENST00000530388 ABL2P42684 1182 aa5.25□□□□□ -1.57
ARHGEF12-209ENST00000530388 ZC3H6P61129 1189 aaKnown RBP5.25□□□□□ -1.57
ARHGEF12-209ENST00000530388 IGBP1P78318 339 aa5.25□□□□□ -1.57
ARHGEF12-209ENST00000530388 PPP1R15BQ5SWA1 713 aa5.25□□□□□ -1.57
ARHGEF12-209ENST00000530388 TMUB1Q9BVT8 246 aa5.25□□□□□ -1.57
ARHGEF12-209ENST00000530388 GIPC2Q8TF65 315 aa5.24□□□□□ -1.57
ARHGEF12-209ENST00000530388 DNAJC2Q99543 621 aaKnown RBP5.24□□□□□ -1.57
ARHGEF12-209ENST00000530388 VRTNQ9H8Y1 702 aa5.24□□□□□ -1.57
ARHGEF12-209ENST00000530388 MAFGO15525 162 aa5.24□□□□□ -1.57
ARHGEF12-209ENST00000530388 SH3D19Q5HYK7 790 aa5.24□□□□□ -1.57
ARHGEF12-209ENST00000530388 TXNDC2Q86VQ3 553 aa5.24□□□□□ -1.57
ARHGEF12-209ENST00000530388 GNPATO15228 680 aa5.24□□□□□ -1.57
ARHGEF12-209ENST00000530388 GPR37L1O60883 481 aa5.24□□□□□ -1.57
ARHGEF12-209ENST00000530388 CFAP70Q5T0N1 1121 aa5.24□□□□□ -1.57
ARHGEF12-209ENST00000530388 PEX14O75381 377 aa5.24□□□□□ -1.57
ARHGEF12-209ENST00000530388 SPTY2D1Q68D10 685 aaPredicted RBP5.24□□□□□ -1.57
ARHGEF12-209ENST00000530388 ZNF467Q7Z7K2 595 aaPredicted RBP5.23□□□□□ -1.57
ARHGEF12-209ENST00000530388 TBC1D2BQ9UPU7 963 aa5.23□□□□□ -1.57
ARHGEF12-209ENST00000530388 RBM47A0AV96 593 aaKnown RBP5.23□□□□□ -1.57
ARHGEF12-209ENST00000530388 NLRP6P59044 892 aa5.23□□□□□ -1.57
ARHGEF12-209ENST00000530388 HSP90AB2PQ58FF8 381 aa5.23□□□□□ -1.57
ARHGEF12-209ENST00000530388 SH3BP5O60239 455 aa5.23□□□□□ -1.57
ARHGEF12-209ENST00000530388 SCNN1AP37088 669 aa5.23□□□□□ -1.57
ARHGEF12-209ENST00000530388 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP5.23□□□□□ -1.57
ARHGEF12-209ENST00000530388 NAALADL2Q58DX5 795 aa5.22□□□□□ -1.57
ARHGEF12-209ENST00000530388 WDR78Q5VTH9 848 aa5.22□□□□□ -1.57
ARHGEF12-209ENST00000530388 RALBP1Q15311 655 aa5.22□□□□□ -1.57
ARHGEF12-209ENST00000530388 DDX12PQ92771 950 aa5.22□□□□□ -1.57
ARHGEF12-209ENST00000530388 CDHR5Q9HBB8 845 aa5.22□□□□□ -1.57
ARHGEF12-209ENST00000530388 BIN2Q9UBW5 565 aaPredicted RBP5.22□□□□□ -1.57
ARHGEF12-209ENST00000530388 PRR29P0C7W0 189 aa5.22□□□□□ -1.57
ARHGEF12-209ENST00000530388 MCCP23508 829 aa5.22□□□□□ -1.57
ARHGEF12-209ENST00000530388 TRPC6Q9Y210 931 aa5.22□□□□□ -1.57
ARHGEF12-209ENST00000530388 TMEM88BA6NKF7 163 aa5.21□□□□□ -1.57
ARHGEF12-209ENST00000530388 ANP32CO43423 234 aa5.21□□□□□ -1.57
ARHGEF12-209ENST00000530388 MDM2Q00987 491 aaPredicted RBP5.21□□□□□ -1.57
ARHGEF12-209ENST00000530388 ERCC3P19447 782 aa5.21□□□□□ -1.58
ARHGEF12-209ENST00000530388 CNPY4Q8N129 248 aa5.21□□□□□ -1.58
ARHGEF12-209ENST00000530388 MAP3K13O43283 966 aa5.21□□□□□ -1.58
ARHGEF12-209ENST00000530388 MYSM1Q5VVJ2 828 aa5.21□□□□□ -1.58
ARHGEF12-209ENST00000530388 WDR3Q9UNX4 943 aaKnown RBP eCLIP5.21□□□□□ -1.58
ARHGEF12-209ENST00000530388 SPDYE5A6NIY4 337 aa5.21□□□□□ -1.58
ARHGEF12-209ENST00000530388 RAB11FIP3O75154 756 aa5.21□□□□□ -1.58
ARHGEF12-209ENST00000530388 TAGLNQ01995 201 aaKnown RBP5.21□□□□□ -1.58
ARHGEF12-209ENST00000530388 FOXD4L6Q3SYB3 417 aaPredicted RBP5.21□□□□□ -1.58
ARHGEF12-209ENST00000530388 CDCA8Q53HL2 280 aa5.21□□□□□ -1.58
ARHGEF12-209ENST00000530388 FOXD4L3Q6VB84 417 aaPredicted RBP5.21□□□□□ -1.58
ARHGEF12-209ENST00000530388 LIMD1Q9UGP4 676 aa5.21□□□□□ -1.58
ARHGEF12-209ENST00000530388 CNGB1Q14028 1251 aaPredicted RBP5.2□□□□□ -1.58
ARHGEF12-209ENST00000530388 BEGAINQ9BUH8 593 aa5.2□□□□□ -1.58
ARHGEF12-209ENST00000530388 TMX4Q9H1E5 349 aaPredicted RBP5.2□□□□□ -1.58
ARHGEF12-209ENST00000530388 METTL14Q9HCE5 456 aaKnown RBP5.2□□□□□ -1.58
ARHGEF12-209ENST00000530388 PTGDRQ13258 359 aa5.2□□□□□ -1.58
ARHGEF12-209ENST00000530388 RFC5P40937 340 aa5.2□□□□□ -1.58
ARHGEF12-209ENST00000530388 CCDC181Q5TID7 509 aa5.19□□□□□ -1.58
ARHGEF12-209ENST00000530388 CCAR1Q8IX12 1150 aaKnown RBP5.19□□□□□ -1.58
ARHGEF12-209ENST00000530388 C8orf37Q96NL8 207 aa5.19□□□□□ -1.58
ARHGEF12-209ENST00000530388 CADPSQ9ULU8 1353 aa5.19□□□□□ -1.58
ARHGEF12-209ENST00000530388 APBB1IPQ7Z5R6 666 aaPredicted RBP5.19□□□□□ -1.58
ARHGEF12-209ENST00000530388 TANGO6Q9C0B7 1094 aa5.19□□□□□ -1.58
ARHGEF12-209ENST00000530388 NPDC1Q9NQX5 325 aaPredicted RBP5.19□□□□□ -1.58
ARHGEF12-209ENST00000530388 ERCC5P28715 1186 aaPredicted RBP5.19□□□□□ -1.58
ARHGEF12-209ENST00000530388 DPY19L2Q6NUT2 758 aa5.19□□□□□ -1.58
ARHGEF12-209ENST00000530388 GPHNQ9NQX3 736 aaPredicted RBP5.19□□□□□ -1.58
ARHGEF12-209ENST00000530388 UCN2Q96RP3 112 aa5.18□□□□□ -1.58
ARHGEF12-209ENST00000530388 TBC1D12O60347 775 aa5.18□□□□□ -1.58
ARHGEF12-209ENST00000530388 PHLDB3Q6NSJ2 640 aa5.18□□□□□ -1.58
ARHGEF12-209ENST00000530388 SLAIN2Q9P270 581 aa5.18□□□□□ -1.58
ARHGEF12-209ENST00000530388 SSTR3P32745 418 aaPredicted RBP5.17□□□□□ -1.58
ARHGEF12-209ENST00000530388 ZNF16P17020 682 aaPredicted RBP5.17□□□□□ -1.58
ARHGEF12-209ENST00000530388 C1QBPQ07021 282 aaKnown RBP5.17□□□□□ -1.58
ARHGEF12-209ENST00000530388 QPCTQ16769 361 aa5.17□□□□□ -1.58
ARHGEF12-209ENST00000530388 DNAJC14Q6Y2X3 702 aaPredicted RBP5.17□□□□□ -1.58
ARHGEF12-209ENST00000530388 DPH6Q7L8W6 267 aa5.17□□□□□ -1.58
ARHGEF12-209ENST00000530388 SIRT1Q96EB6 747 aa5.17□□□□□ -1.58
ARHGEF12-209ENST00000530388 TERF2IPQ9NYB0 399 aa5.17□□□□□ -1.58
ARHGEF12-209ENST00000530388 TSNAXIP1Q2TAA8 658 aa5.17□□□□□ -1.58
ARHGEF12-209ENST00000530388 MAGEC2Q9UBF1 373 aaPredicted RBP5.17□□□□□ -1.58
ARHGEF12-209ENST00000530388 HIC1Q14526 733 aa5.16□□□□□ -1.58
ARHGEF12-209ENST00000530388 GIMAP6Q6P9H5 292 aa5.16□□□□□ -1.58
ARHGEF12-209ENST00000530388 ZNF579Q8NAF0 562 aaKnown RBP5.16□□□□□ -1.58
ARHGEF12-209ENST00000530388 WWC3Q9ULE0 1092 aa5.16□□□□□ -1.58
ARHGEF12-209ENST00000530388 TRIM34Q9BYJ4 488 aa5.16□□□□□ -1.58
ARHGEF12-209ENST00000530388 RNF187Q5TA31 235 aaPredicted RBP5.15□□□□□ -1.58
ARHGEF12-209ENST00000530388 ZNF662Q6ZS27 426 aa5.15□□□□□ -1.58
ARHGEF12-209ENST00000530388 LMOD1P29536 600 aaPredicted RBP5.15□□□□□ -1.58
ARHGEF12-209ENST00000530388 GTF2F1P35269 517 aaKnown RBP eCLIP5.15□□□□□ -1.58
ARHGEF12-209ENST00000530388 HDGFL1Q5TGJ6 251 aa5.15□□□□□ -1.58
ARHGEF12-209ENST00000530388 ZCRB1Q8TBF4 217 aaKnown RBP5.15□□□□□ -1.58
ARHGEF12-209ENST00000530388 MARSP56192 900 aaKnown RBP5.15□□□□□ -1.59
ARHGEF12-209ENST00000530388 UBA5Q9GZZ9 404 aa5.15□□□□□ -1.59
ARHGEF12-209ENST00000530388 TMTC2Q8N394 836 aa5.14□□□□□ -1.59
ARHGEF12-209ENST00000530388 HMX1Q9NP08 348 aaPredicted RBP5.14□□□□□ -1.59
ARHGEF12-209ENST00000530388 KLHL42Q9P2K6 505 aa5.14□□□□□ -1.59
ARHGEF12-209ENST00000530388 WDHD1O75717 1129 aaPredicted RBP5.14□□□□□ -1.59
ARHGEF12-209ENST00000530388 UPF1Q92900 1129 aaKnown RBP eCLIP5.14□□□□□ -1.59
ARHGEF12-209ENST00000530388 VTI1AQ96AJ9 217 aa5.14□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms