RNA–Protein interactions for RNA: ENST00000530279.5

C11orf54-208, Transcript of chromosome 11 open reading frame 54, humanhuman

TSL 4

Gene C11orf54, Length 552 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-208ENST00000530279 SLF2Q8IX21 1173 aa9.23□□□□□ -0.93
C11orf54-208ENST00000530279 CRIPAKQ8N1N5 446 aa9.23□□□□□ -0.93
C11orf54-208ENST00000530279 GMPR2Q9P2T1 348 aaKnown RBP9.23□□□□□ -0.93
C11orf54-208ENST00000530279 DACH1Q9UI36 760 aa9.23□□□□□ -0.93
C11orf54-208ENST00000530279 CAMK2BQ13554 666 aa9.22□□□□□ -0.93
C11orf54-208ENST00000530279 PPEF1O14829 653 aaPredicted RBP9.21□□□□□ -0.94
C11orf54-208ENST00000530279 PCDHB3Q9Y5E6 796 aa9.21□□□□□ -0.94
C11orf54-208ENST00000530279 NISCHQ9Y2I1 1504 aa9.21□□□□□ -0.94
C11orf54-208ENST00000530279 GTPBP6O43824 516 aaPredicted RBP9.2□□□□□ -0.94
C11orf54-208ENST00000530279 SWT1Q5T5J6 900 aaKnown RBP9.2□□□□□ -0.94
C11orf54-208ENST00000530279 PRR14Q9BWN1 585 aa9.2□□□□□ -0.94
C11orf54-208ENST00000530279 SLC4A3P48751 1232 aa9.18□□□□□ -0.94
C11orf54-208ENST00000530279 FAM181BA6NEQ2 426 aa9.17□□□□□ -0.94
C11orf54-208ENST00000530279 AXIN1O15169 862 aa9.17□□□□□ -0.94
C11orf54-208ENST00000530279 S1PR4O95977 384 aa9.17□□□□□ -0.94
C11orf54-208ENST00000530279 BLOC1S3Q6QNY0 202 aa9.17□□□□□ -0.94
C11orf54-208ENST00000530279 AVPP01185 164 aa9.16□□□□□ -0.94
C11orf54-208ENST00000530279 LMOD2Q6P5Q4 547 aa9.16□□□□□ -0.94
C11orf54-208ENST00000530279 TLL1O43897 1013 aa9.15□□□□□ -0.94
C11orf54-208ENST00000530279 FOXC1Q12948 553 aa9.15□□□□□ -0.94
C11orf54-208ENST00000530279 PKD2L1Q9P0L9 805 aa9.14□□□□□ -0.95
C11orf54-208ENST00000530279 TERTO14746 1132 aaKnown RBP9.13□□□□□ -0.95
C11orf54-208ENST00000530279 CTC1Q2NKJ3 1217 aa9.13□□□□□ -0.95
C11orf54-208ENST00000530279 LCE2CQ5TA81 110 aa9.13□□□□□ -0.95
C11orf54-208ENST00000530279 RBM27Q9P2N5 1060 aaKnown RBP9.13□□□□□ -0.95
C11orf54-208ENST00000530279 CADPS2Q86UW7 1296 aa9.12□□□□□ -0.95
C11orf54-208ENST00000530279 SUZ12Q15022 739 aaKnown RBP9.11□□□□□ -0.95
C11orf54-208ENST00000530279 SMCPP49901 116 aaPredicted RBP9.1□□□□□ -0.95
C11orf54-208ENST00000530279 PDIA6Q15084 440 aa9.09□□□□□ -0.95
C11orf54-208ENST00000530279 PLA2G2CQ5R387 149 aa9.09□□□□□ -0.95
C11orf54-208ENST00000530279 TOR4AQ9NXH8 423 aa9.08□□□□□ -0.96
C11orf54-208ENST00000530279 SPDYE16A6NNV3 312 aaPredicted RBP9.07□□□□□ -0.96
C11orf54-208ENST00000530279 PRIM1P49642 420 aaKnown RBP9.07□□□□□ -0.96
C11orf54-208ENST00000530279 ADH1BP00325 375 aa9.06□□□□□ -0.96
C11orf54-208ENST00000530279 CYP4X1Q8N118 509 aa9.06□□□□□ -0.96
C11orf54-208ENST00000530279 SLC6A16Q9GZN6 736 aa9.05□□□□□ -0.96
C11orf54-208ENST00000530279 SNRPBP14678 240 aaKnown RBP9.04□□□□□ -0.96
C11orf54-208ENST00000530279 TTC13Q8NBP0 860 aa9.04□□□□□ -0.96
C11orf54-208ENST00000530279 CDHR5Q9HBB8 845 aa9.04□□□□□ -0.96
C11orf54-208ENST00000530279 GRXCR2A6NFK2 248 aa9.02□□□□□ -0.97
C11orf54-208ENST00000530279 ACTN4O43707 911 aaKnown RBP9.02□□□□□ -0.97
C11orf54-208ENST00000530279 KMT5BQ4FZB7 885 aa9.01□□□□□ -0.97
C11orf54-208ENST00000530279 PADI6Q6TGC4 694 aa9.01□□□□□ -0.97
C11orf54-208ENST00000530279 ZSCAN1Q8NBB4 408 aa9.01□□□□□ -0.97
C11orf54-208ENST00000530279 ATP13A2Q9NQ11 1180 aa9.01□□□□□ -0.97
C11orf54-208ENST00000530279 RPIAP49247 311 aa9□□□□□ -0.97
C11orf54-208ENST00000530279 SLC16A10Q8TF71 515 aa9□□□□□ -0.97
C11orf54-208ENST00000530279 EYA1Q99502 592 aa9□□□□□ -0.97
C11orf54-208ENST00000530279 SENP2Q9HC62 589 aa9□□□□□ -0.97
C11orf54-208ENST00000530279 NR1I2O75469 434 aa8.99□□□□□ -0.97
C11orf54-208ENST00000530279 TRIM47Q96LD4 638 aa8.99□□□□□ -0.97
C11orf54-208ENST00000530279 CD2BP2O95400 341 aaKnown RBP8.98□□□□□ -0.97
C11orf54-208ENST00000530279 LORP23490 312 aaPredicted RBP8.97□□□□□ -0.97
C11orf54-208ENST00000530279 TTC24A2A3L6 582 aaPredicted RBP8.96□□□□□ -0.98
C11orf54-208ENST00000530279 OSBPP22059 807 aa8.96□□□□□ -0.98
C11orf54-208ENST00000530279 GMPRP36959 345 aa8.94□□□□□ -0.98
C11orf54-208ENST00000530279 NPDC1Q9NQX5 325 aaPredicted RBP8.94□□□□□ -0.98
C11orf54-208ENST00000530279 CFHP08603 1231 aa8.93□□□□□ -0.98
C11orf54-208ENST00000530279 KIFC2Q96AC6 838 aa8.93□□□□□ -0.98
C11orf54-208ENST00000530279 DNAJB2P25686 324 aa8.92□□□□□ -0.98
C11orf54-208ENST00000530279 SCUBE3Q8IX30 993 aa8.92□□□□□ -0.98
C11orf54-208ENST00000530279 SPSB2Q99619 263 aa8.9□□□□□ -0.98
C11orf54-208ENST00000530279 NXF1Q9UBU9 619 aaKnown RBP8.9□□□□□ -0.98
C11orf54-208ENST00000530279 SMPD1P17405 629 aa8.89□□□□□ -0.99
C11orf54-208ENST00000530279 IRF7Q92985 503 aa8.89□□□□□ -0.99
C11orf54-208ENST00000530279 TMEM134Q9H6X4 195 aa8.88□□□□□ -0.99
C11orf54-208ENST00000530279 SNIP1Q8TAD8 396 aaKnown RBP8.87□□□□□ -0.99
C11orf54-208ENST00000530279 FCF1Q9Y324 198 aaKnown RBP8.87□□□□□ -0.99
C11orf54-208ENST00000530279 NPAS3Q8IXF0 933 aa8.85□□□□□ -0.99
C11orf54-208ENST00000530279 RBM46Q8TBY0 533 aaKnown RBP8.84□□□□□ -0.99
C11orf54-208ENST00000530279 ZBTB24O43167 697 aaPredicted RBP8.83□□□□□ -1
C11orf54-208ENST00000530279 SLC10A3P09131 477 aa8.83□□□□□ -1
C11orf54-208ENST00000530279 KCTD17Q8N5Z5 321 aa8.83□□□□□ -1
C11orf54-208ENST00000530279 ARIH1Q9Y4X5 557 aaPredicted RBP8.83□□□□□ -1
C11orf54-208ENST00000530279 WNT7AO00755 349 aa8.82□□□□□ -1
C11orf54-208ENST00000530279 PUS10Q3MIT2 529 aaKnown RBP8.82□□□□□ -1
C11orf54-208ENST00000530279 J3QL48 77 aa8.81□□□□□ -1
C11orf54-208ENST00000530279 RCCD1A6NED2 376 aa8.8□□□□□ -1
C11orf54-208ENST00000530279 KCNMA1Q12791 1236 aa8.8□□□□□ -1
C11orf54-208ENST00000530279 E2F4Q16254 413 aa8.8□□□□□ -1
C11orf54-208ENST00000530279 HPS1Q92902 700 aa8.79□□□□□ -1
C11orf54-208ENST00000530279 H3BM21 787 aa8.77□□□□□ -1.01
C11orf54-208ENST00000530279 VEGFBP49765 207 aa8.77□□□□□ -1.01
C11orf54-208ENST00000530279 MRGPRX2Q96LB1 330 aa8.77□□□□□ -1.01
C11orf54-208ENST00000530279 ERBB4Q15303 1308 aa8.76□□□□□ -1.01
C11orf54-208ENST00000530279 ADGRG1Q9Y653 693 aa8.75□□□□□ -1.01
C11orf54-208ENST00000530279 FAM160A2Q8N612 972 aaPredicted RBP8.74□□□□□ -1.01
C11orf54-208ENST00000530279 GSK3AP49840 483 aa8.73□□□□□ -1.01
C11orf54-208ENST00000530279 RSPH4AQ5TD94 716 aa8.73□□□□□ -1.01
C11orf54-208ENST00000530279 THAP11Q96EK4 314 aa8.73□□□□□ -1.01
C11orf54-208ENST00000530279 FMNL1O95466 1100 aaPredicted RBP8.72□□□□□ -1.01
C11orf54-208ENST00000530279 TMEM151AQ8N4L1 468 aa8.72□□□□□ -1.01
C11orf54-208ENST00000530279 TRIM32Q13049 653 aa8.71□□□□□ -1.02
C11orf54-208ENST00000530279 REPIN1Q9BWE0 567 aaKnown RBP8.71□□□□□ -1.02
C11orf54-208ENST00000530279 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.7□□□□□ -1.02
C11orf54-208ENST00000530279 AMER1Q5JTC6 1135 aaPredicted RBP8.7□□□□□ -1.02
C11orf54-208ENST00000530279 MORN1Q5T089 497 aa8.7□□□□□ -1.02
C11orf54-208ENST00000530279 PRDM9Q9NQV7 894 aa8.69□□□□□ -1.02
C11orf54-208ENST00000530279 GDF11O95390 407 aa8.68□□□□□ -1.02
C11orf54-208ENST00000530279 PTGDRQ13258 359 aa8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms