RNA–Protein interactions for RNA: ENST00000530226.1

SIPA1-206, Transcript of signal-induced proliferation-associated 1, humanhuman

TSL 2

Gene SIPA1, Length 560 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIPA1-206ENST00000530226 ZFYVE9O95405 1425 aa21.47■■□□□ 1.03
SIPA1-206ENST00000530226 NWD1Q149M9 1564 aa21.46■■□□□ 1.03
SIPA1-206ENST00000530226 SCAF1Q9H7N4 1312 aaKnown RBP21.46■■□□□ 1.03
SIPA1-206ENST00000530226 NAIPQ13075 1403 aa21.46■■□□□ 1.03
SIPA1-206ENST00000530226 XIRP1Q702N8 1843 aaKnown RBP21.45■■□□□ 1.02
SIPA1-206ENST00000530226 RIMS2Q9UQ26 1411 aa21.45■■□□□ 1.02
SIPA1-206ENST00000530226 HFM1A2PYH4 1435 aa21.44■■□□□ 1.02
SIPA1-206ENST00000530226 NKTRP30414 1462 aaKnown RBP21.43■■□□□ 1.02
SIPA1-206ENST00000530226 DIP2AQ14689 1571 aa21.42■■□□□ 1.02
SIPA1-206ENST00000530226 PLEKHG1Q9ULL1 1385 aa21.42■■□□□ 1.02
SIPA1-206ENST00000530226 PPP1R15AO75807 674 aaPredicted RBP21.41■■□□□ 1.02
SIPA1-206ENST00000530226 TRPM2O94759 1503 aa21.4■■□□□ 1.02
SIPA1-206ENST00000530226 HDGFP51858 240 aaKnown RBP21.39■■□□□ 1.01
SIPA1-206ENST00000530226 CHGAP10645 457 aaKnown RBP21.37■■□□□ 1.01
SIPA1-206ENST00000530226 BCANQ96GW7 911 aa21.37■■□□□ 1.01
SIPA1-206ENST00000530226 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.36■■□□□ 1.01
SIPA1-206ENST00000530226 SLC26A8Q96RN1 970 aa21.36■■□□□ 1.01
SIPA1-206ENST00000530226 CLTCL1P53675 1640 aa21.36■■□□□ 1.01
SIPA1-206ENST00000530226 CHD2O14647 1828 aaKnown RBP21.36■■□□□ 1.01
SIPA1-206ENST00000530226 KIF1BO60333 1816 aa21.34■■□□□ 1.01
SIPA1-206ENST00000530226 KCNA6P17658 529 aa21.33■■□□□ 1.01
SIPA1-206ENST00000530226 MED1Q15648 1581 aaPredicted RBP21.32■■□□□ 1
SIPA1-206ENST00000530226 TMEM94Q12767 1356 aa21.32■■□□□ 1
SIPA1-206ENST00000530226 SETBP1Q9Y6X0 1596 aa21.29■■□□□ 1
SIPA1-206ENST00000530226 ADAMTS13Q76LX8 1427 aa21.29■■□□□ 1
SIPA1-206ENST00000530226 NRXN3Q9Y4C0 1643 aa21.28■■□□□ 1
SIPA1-206ENST00000530226 PIK3R4Q99570 1358 aa21.27■■□□□ 1
SIPA1-206ENST00000530226 NEXMIFQ5QGS0 1516 aa21.27■■□□□ 1
SIPA1-206ENST00000530226 TRIM52Q96A61 297 aa21.26■□□□□ 0.99
SIPA1-206ENST00000530226 PROSER2Q86WR7 435 aaPredicted RBP21.25■□□□□ 0.99
SIPA1-206ENST00000530226 SENP3Q9H4L4 574 aaPredicted RBP21.25■□□□□ 0.99
SIPA1-206ENST00000530226 TBX22Q9Y458 520 aa21.25■□□□□ 0.99
SIPA1-206ENST00000530226 MSH6P52701 1360 aa21.24■□□□□ 0.99
SIPA1-206ENST00000530226 FAM135BQ49AJ0 1406 aa21.24■□□□□ 0.99
SIPA1-206ENST00000530226 NUTM2DQ5VT03 806 aaPredicted RBP21.23■□□□□ 0.99
SIPA1-206ENST00000530226 ROBO1Q9Y6N7 1651 aa21.23■□□□□ 0.99
SIPA1-206ENST00000530226 XRN1Q8IZH2 1706 aaKnown RBP21.23■□□□□ 0.99
SIPA1-206ENST00000530226 ZNF326Q5BKZ1 582 aaKnown RBP21.22■□□□□ 0.99
SIPA1-206ENST00000530226 RBM33Q96EV2 1170 aaKnown RBP21.21■□□□□ 0.99
SIPA1-206ENST00000530226 SLC4A1APQ9BWU0 796 aaKnown RBP21.21■□□□□ 0.99
SIPA1-206ENST00000530226 NCOA3Q9Y6Q9 1424 aa21.2■□□□□ 0.98
SIPA1-206ENST00000530226 PPLO60437 1756 aa21.17■□□□□ 0.98
SIPA1-206ENST00000530226 SIPA1L2Q9P2F8 1722 aaPredicted RBP21.15■□□□□ 0.98
SIPA1-206ENST00000530226 PHF23Q9BUL5 403 aaPredicted RBP21.15■□□□□ 0.98
SIPA1-206ENST00000530226 RGS17Q9UGC6 210 aaPredicted RBP21.15■□□□□ 0.98
SIPA1-206ENST00000530226 ACIN1Q9UKV3 1341 aaKnown RBP21.14■□□□□ 0.97
SIPA1-206ENST00000530226 SETD1AO15047 1707 aaKnown RBP21.14■□□□□ 0.97
SIPA1-206ENST00000530226 PTPRUQ92729 1446 aa21.13■□□□□ 0.97
SIPA1-206ENST00000530226 C14orf37Q86TY3 774 aa21.13■□□□□ 0.97
SIPA1-206ENST00000530226 CCDC144AA2RUR9 1427 aa21.12■□□□□ 0.97
SIPA1-206ENST00000530226 SLAIN2Q9P270 581 aa21.11■□□□□ 0.97
SIPA1-206ENST00000530226 PHLPP1O60346 1717 aa21.11■□□□□ 0.97
SIPA1-206ENST00000530226 DCCP43146 1447 aa21.11■□□□□ 0.97
SIPA1-206ENST00000530226 SETD5Q9C0A6 1442 aa21.1■□□□□ 0.97
SIPA1-206ENST00000530226 IFT172Q9UG01 1749 aa21.09■□□□□ 0.97
SIPA1-206ENST00000530226 AMOTL2Q9Y2J4 779 aa21.09■□□□□ 0.97
SIPA1-206ENST00000530226 RPGRIP1LQ68CZ1 1315 aa21.08■□□□□ 0.97
SIPA1-206ENST00000530226 METP08581 1390 aa21.08■□□□□ 0.96
SIPA1-206ENST00000530226 NALCNQ8IZF0 1738 aa21.07■□□□□ 0.96
SIPA1-206ENST00000530226 VGFO15240 615 aaPredicted RBP21.06■□□□□ 0.96
SIPA1-206ENST00000530226 CADPS2Q86UW7 1296 aa21.06■□□□□ 0.96
SIPA1-206ENST00000530226 PTCH1Q13635 1447 aa21.05■□□□□ 0.96
SIPA1-206ENST00000530226 FOXD1Q16676 465 aa21.05■□□□□ 0.96
SIPA1-206ENST00000530226 MPHOSPH9Q99550 1183 aa21.05■□□□□ 0.96
SIPA1-206ENST00000530226 C19orf44Q9H6X5 657 aa21.05■□□□□ 0.96
SIPA1-206ENST00000530226 COL16A1Q07092 1604 aaPredicted RBP21.04■□□□□ 0.96
SIPA1-206ENST00000530226 ATF3P18847 181 aa21.04■□□□□ 0.96
SIPA1-206ENST00000530226 AHDC1Q5TGY3 1603 aaPredicted RBP21.04■□□□□ 0.96
SIPA1-206ENST00000530226 PRAG1Q86YV5 1406 aa21.04■□□□□ 0.96
SIPA1-206ENST00000530226 ADGRL3Q9HAR2 1447 aa21.04■□□□□ 0.96
SIPA1-206ENST00000530226 SPATA31E1Q6ZUB1 1445 aa21.03■□□□□ 0.96
SIPA1-206ENST00000530226 RAB3GAP2Q9H2M9 1393 aa21.02■□□□□ 0.96
SIPA1-206ENST00000530226 ANKRD30BQ9BXX2 1392 aa20.99■□□□□ 0.95
SIPA1-206ENST00000530226 ASXL1Q8IXJ9 1541 aa20.99■□□□□ 0.95
SIPA1-206ENST00000530226 POTEAQ6S8J7 498 aa20.98■□□□□ 0.95
SIPA1-206ENST00000530226 NHSL1Q5SYE7 1610 aa20.97■□□□□ 0.95
SIPA1-206ENST00000530226 LAMC1P11047 1609 aa20.96■□□□□ 0.95
SIPA1-206ENST00000530226 MST1RQ04912 1400 aa20.96■□□□□ 0.95
SIPA1-206ENST00000530226 SHPRHQ149N8 1683 aa20.96■□□□□ 0.95
SIPA1-206ENST00000530226 KNDC1Q76NI1 1749 aa20.96■□□□□ 0.95
SIPA1-206ENST00000530226 JCADQ9P266 1359 aa20.96■□□□□ 0.95
SIPA1-206ENST00000530226 PIK3C2GO75747 1445 aa20.94■□□□□ 0.94
SIPA1-206ENST00000530226 ROBO2Q9HCK4 1378 aa20.93■□□□□ 0.94
SIPA1-206ENST00000530226 MYOM2P54296 1465 aa20.93■□□□□ 0.94
SIPA1-206ENST00000530226 CDC42BPGQ6DT37 1551 aa20.92■□□□□ 0.94
SIPA1-206ENST00000530226 RGL3Q3MIN7 710 aa20.91■□□□□ 0.94
SIPA1-206ENST00000530226 TECPR2O15040 1411 aa20.9■□□□□ 0.94
SIPA1-206ENST00000530226 ADGRF5Q8IZF2 1346 aa20.9■□□□□ 0.94
SIPA1-206ENST00000530226 BRINP3Q76B58 766 aa20.9■□□□□ 0.94
SIPA1-206ENST00000530226 NRXN1Q9ULB1 1477 aa20.88■□□□□ 0.93
SIPA1-206ENST00000530226 SPATA31A6Q5VVP1 1343 aa20.86■□□□□ 0.93
SIPA1-206ENST00000530226 C1orf167Q5SNV9 1468 aa20.86■□□□□ 0.93
SIPA1-206ENST00000530226 LRPPRCP42704 1394 aaKnown RBP20.85■□□□□ 0.93
SIPA1-206ENST00000530226 LRP6O75581 1613 aa20.83■□□□□ 0.93
SIPA1-206ENST00000530226 HRCP23327 699 aa20.82■□□□□ 0.92
SIPA1-206ENST00000530226 YTHDC2Q9H6S0 1430 aaKnown RBP20.81■□□□□ 0.92
SIPA1-206ENST00000530226 ABCC11Q96J66 1382 aa20.8■□□□□ 0.92
SIPA1-206ENST00000530226 FMN2Q9NZ56 1722 aa20.78■□□□□ 0.92
SIPA1-206ENST00000530226 STK26Q9P289 416 aa20.77■□□□□ 0.92
SIPA1-206ENST00000530226 MEX3CQ5U5Q3 659 aaKnown RBP20.76■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms