RNA–Protein interactions for RNA: ENST00000530226.1

SIPA1-206, Transcript of signal-induced proliferation-associated 1, humanhuman

TSL 2

Gene SIPA1, Length 560 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIPA1-206ENST00000530226 NISCHQ9Y2I1 1504 aa35.1■■■■□ 3.21
SIPA1-206ENST00000530226 CCDC180Q9P1Z9 1646 aa31.53■■■□□ 2.64
SIPA1-206ENST00000530226 ABCC9O60706 1549 aa31.07■■■□□ 2.56
SIPA1-206ENST00000530226 RB1CC1Q8TDY2 1594 aa29.78■■■□□ 2.36
SIPA1-206ENST00000530226 NACADO15069 1562 aa29.64■■■□□ 2.34
SIPA1-206ENST00000530226 MYO15BQ96JP2 1530 aa29.35■■■□□ 2.29
SIPA1-206ENST00000530226 DCAF8L2P0C7V8 631 aa29.3■■■□□ 2.28
SIPA1-206ENST00000530226 DNAJC5BQ9UF47 199 aa29.3■■■□□ 2.28
SIPA1-206ENST00000530226 ZCCHC6Q5VYS8 1495 aaKnown RBP29.21■■■□□ 2.27
SIPA1-206ENST00000530226 UNC13AQ9UPW8 1703 aa29.13■■■□□ 2.25
SIPA1-206ENST00000530226 DCAF1Q9Y4B6 1507 aa29.08■■■□□ 2.25
SIPA1-206ENST00000530226 PABPN1Q86U42 306 aaKnown RBP eCLIP28.98■■■□□ 2.23
SIPA1-206ENST00000530226 BICRAQ9NZM4 1560 aa28.84■■■□□ 2.21
SIPA1-206ENST00000530226 SCRIBQ14160 1630 aa28.65■■■□□ 2.18
SIPA1-206ENST00000530226 SHROOM4Q9ULL8 1493 aa28.62■■■□□ 2.17
SIPA1-206ENST00000530226 EIF4G1Q04637 1599 aaKnown RBP28.14■■■□□ 2.1
SIPA1-206ENST00000530226 CC2D2AQ9P2K1 1620 aa28.1■■■□□ 2.09
SIPA1-206ENST00000530226 CECR2Q9BXF3 1484 aa28■■■□□ 2.07
SIPA1-206ENST00000530226 SMARCA4P51532 1647 aa27.38■■□□□ 1.97
SIPA1-206ENST00000530226 BAZ1AQ9NRL2 1556 aaPredicted RBP27.29■■□□□ 1.96
SIPA1-206ENST00000530226 SMARCA2P51531 1590 aa27.28■■□□□ 1.96
SIPA1-206ENST00000530226 NCAPD3P42695 1498 aa27.27■■□□□ 1.96
SIPA1-206ENST00000530226 ATAD2BQ9ULI0 1458 aa27.24■■□□□ 1.95
SIPA1-206ENST00000530226 HMGXB3Q12766 1538 aa27.22■■□□□ 1.95
SIPA1-206ENST00000530226 PEG3Q9GZU2 1588 aa27.11■■□□□ 1.93
SIPA1-206ENST00000530226 BAZ1BQ9UIG0 1483 aaKnown RBP27.06■■□□□ 1.92
SIPA1-206ENST00000530226 MROH2BQ7Z745 1585 aa27.01■■□□□ 1.92
SIPA1-206ENST00000530226 DNAJC5Q9H3Z4 198 aa26.89■■□□□ 1.9
SIPA1-206ENST00000530226 ERCC6Q03468 1493 aa26.84■■□□□ 1.89
SIPA1-206ENST00000530226 CUX2O14529 1486 aa26.8■■□□□ 1.88
SIPA1-206ENST00000530226 WIZO95785 1651 aa26.74■■□□□ 1.87
SIPA1-206ENST00000530226 NESP48681 1621 aa26.72■■□□□ 1.87
SIPA1-206ENST00000530226 LAMC3Q9Y6N6 1575 aa26.71■■□□□ 1.87
SIPA1-206ENST00000530226 RSF1Q96T23 1441 aaPredicted RBP26.54■■□□□ 1.84
SIPA1-206ENST00000530226 THOC2Q8NI27 1593 aaKnown RBP26.53■■□□□ 1.84
SIPA1-206ENST00000530226 KIF21AQ7Z4S6 1674 aa26.52■■□□□ 1.84
SIPA1-206ENST00000530226 TOP2AP11388 1531 aaKnown RBP26.49■■□□□ 1.83
SIPA1-206ENST00000530226 PDS5BQ9NTI5 1447 aa26.48■■□□□ 1.83
SIPA1-206ENST00000530226 CADPSQ9ULU8 1353 aa26.44■■□□□ 1.82
SIPA1-206ENST00000530226 MRC2Q9UBG0 1479 aa26.27■■□□□ 1.8
SIPA1-206ENST00000530226 CFTRP13569 1480 aa26.24■■□□□ 1.79
SIPA1-206ENST00000530226 CEP164Q9UPV0 1460 aa26.23■■□□□ 1.79
SIPA1-206ENST00000530226 WDR62O43379 1518 aa26.22■■□□□ 1.79
SIPA1-206ENST00000530226 PRDM2Q13029 1718 aa26.2■■□□□ 1.79
SIPA1-206ENST00000530226 FANCD2Q9BXW9 1451 aa26.19■■□□□ 1.78
SIPA1-206ENST00000530226 CCDC88BA6NC98 1476 aa26.06■■□□□ 1.76
SIPA1-206ENST00000530226 URB2Q14146 1524 aaKnown RBP25.94■■□□□ 1.74
SIPA1-206ENST00000530226 ABCC8Q09428 1581 aa25.73■■□□□ 1.71
SIPA1-206ENST00000530226 TOPBP1Q92547 1522 aa25.73■■□□□ 1.71
SIPA1-206ENST00000530226 DNMBPQ6XZF7 1577 aa25.73■■□□□ 1.71
SIPA1-206ENST00000530226 IFT140Q96RY7 1462 aa25.67■■□□□ 1.7
SIPA1-206ENST00000530226 OSCARQ8IYS5 282 aa25.62■■□□□ 1.69
SIPA1-206ENST00000530226 TRIM41Q8WV44 630 aa25.59■■□□□ 1.69
SIPA1-206ENST00000530226 EIF4G3O43432 1585 aaKnown RBP25.55■■□□□ 1.68
SIPA1-206ENST00000530226 ZNF608Q9ULD9 1512 aaPredicted RBP25.54■■□□□ 1.68
SIPA1-206ENST00000530226 TARBP1Q13395 1621 aaKnown RBP25.51■■□□□ 1.67
SIPA1-206ENST00000530226 POLA1P09884 1462 aaPredicted RBP25.49■■□□□ 1.67
SIPA1-206ENST00000530226 SUPT5HO00267 1087 aaKnown RBP25.49■■□□□ 1.67
SIPA1-206ENST00000530226 CUX1P39880 1505 aa25.4■■□□□ 1.66
SIPA1-206ENST00000530226 WDR97A6NE52 1622 aa25.38■■□□□ 1.65
SIPA1-206ENST00000530226 FGD5Q6ZNL6 1462 aa25.38■■□□□ 1.65
SIPA1-206ENST00000530226 RAD54L2Q9Y4B4 1467 aa25.32■■□□□ 1.64
SIPA1-206ENST00000530226 SOGA1O94964 1423 aa25.31■■□□□ 1.64
SIPA1-206ENST00000530226 AQRO60306 1485 aaKnown RBP eCLIP25.31■■□□□ 1.642e-6■■■■■ 32.4
SIPA1-206ENST00000530226 CHD1O14646 1710 aa25.3■■□□□ 1.64
SIPA1-206ENST00000530226 RIMBP3CA6NJZ7 1639 aa25.2■■□□□ 1.62
SIPA1-206ENST00000530226 RIMBP3BA6NNM3 1639 aa25.2■■□□□ 1.62
SIPA1-206ENST00000530226 RIMBP3Q9UFD9 1639 aa25.2■■□□□ 1.62
SIPA1-206ENST00000530226 TDRD9Q8NDG6 1382 aaKnown RBP25.18■■□□□ 1.62
SIPA1-206ENST00000530226 PBRM1Q86U86 1689 aa25.16■■□□□ 1.62
SIPA1-206ENST00000530226 BIVM-ERCC5R4GMW8 1640 aa25.15■■□□□ 1.62
SIPA1-206ENST00000530226 SNAPC4Q5SXM2 1469 aa25.15■■□□□ 1.62
SIPA1-206ENST00000530226 ARHGEF11O15085 1522 aa25.15■■□□□ 1.62
SIPA1-206ENST00000530226 MAGI1Q96QZ7 1491 aaPredicted RBP25.15■■□□□ 1.62
SIPA1-206ENST00000530226 GRIN2BQ13224 1484 aa25.14■■□□□ 1.61
SIPA1-206ENST00000530226 TOP2BQ02880 1626 aa25.12■■□□□ 1.61
SIPA1-206ENST00000530226 ABCA5Q8WWZ7 1642 aa25.12■■□□□ 1.61
SIPA1-206ENST00000530226 ABCA10Q8WWZ4 1543 aa25.12■■□□□ 1.61
SIPA1-206ENST00000530226 WRNQ14191 1432 aaPredicted RBP eCLIP25.08■■□□□ 1.61
SIPA1-206ENST00000530226 SYNJ1O43426 1573 aa25.08■■□□□ 1.61
SIPA1-206ENST00000530226 GAPVD1Q14C86 1478 aa25.07■■□□□ 1.6
SIPA1-206ENST00000530226 FBLN2P98095 1184 aa25.05■■□□□ 1.6
SIPA1-206ENST00000530226 SYNJ2O15056 1496 aa25.02■■□□□ 1.6
SIPA1-206ENST00000530226 CYB5RLQ6IPT4 315 aa25■■□□□ 1.59
SIPA1-206ENST00000530226 CLASP1Q7Z460 1538 aa24.98■■□□□ 1.59
SIPA1-206ENST00000530226 CHMP7Q8WUX9 453 aaPredicted RBP24.94■■□□□ 1.58
SIPA1-206ENST00000530226 ARAP1Q96P48 1450 aa24.92■■□□□ 1.58
SIPA1-206ENST00000530226 ADAMTS12P58397 1594 aa24.92■■□□□ 1.58
SIPA1-206ENST00000530226 ERICH3Q5RHP9 1530 aa24.85■■□□□ 1.57
SIPA1-206ENST00000530226 GRIN2AQ12879 1464 aa24.83■■□□□ 1.56
SIPA1-206ENST00000530226 FHAD1B1AJZ9 1412 aa24.77■■□□□ 1.56
SIPA1-206ENST00000530226 CEP170Q5SW79 1584 aa24.72■■□□□ 1.55
SIPA1-206ENST00000530226 NUP160Q12769 1436 aa24.71■■□□□ 1.55
SIPA1-206ENST00000530226 TRHP20396 242 aaPredicted RBP24.67■■□□□ 1.54
SIPA1-206ENST00000530226 SHROOM2Q13796 1616 aa24.63■■□□□ 1.53
SIPA1-206ENST00000530226 CUL7Q14999 1698 aa24.61■■□□□ 1.53
SIPA1-206ENST00000530226 KIF27Q86VH2 1401 aa24.6■■□□□ 1.53
SIPA1-206ENST00000530226 RUSC2Q8N2Y8 1516 aa24.57■■□□□ 1.52
SIPA1-206ENST00000530226 ERCC6L2Q5T890 1561 aa24.54■■□□□ 1.52
SIPA1-206ENST00000530226 IGF1RP08069 1367 aa24.43■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 118.2 ms