RNA–Protein interactions for RNA: ENST00000530068.5

CTNND1-224, Transcript of catenin delta 1, humanhuman

TSL 4

Gene CTNND1, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-224ENST00000530068 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.27■□□□□ 0.36
CTNND1-224ENST00000530068 JCADQ9P266 1359 aa17.27■□□□□ 0.35
CTNND1-224ENST00000530068 ADGRB3O60242 1522 aa17.26■□□□□ 0.35
CTNND1-224ENST00000530068 RPRD2Q5VT52 1461 aaKnown RBP17.26■□□□□ 0.35
CTNND1-224ENST00000530068 RBM33Q96EV2 1170 aaKnown RBP17.26■□□□□ 0.35
CTNND1-224ENST00000530068 PLEKHG1Q9ULL1 1385 aa17.26■□□□□ 0.35
CTNND1-224ENST00000530068 XIRP1Q702N8 1843 aaKnown RBP17.26■□□□□ 0.35
CTNND1-224ENST00000530068 NCOA3Q9Y6Q9 1424 aa17.24■□□□□ 0.35
CTNND1-224ENST00000530068 TBX22Q9Y458 520 aa17.24■□□□□ 0.35
CTNND1-224ENST00000530068 NWD1Q149M9 1564 aa17.23■□□□□ 0.35
CTNND1-224ENST00000530068 ADGRL2O95490 1459 aa17.23■□□□□ 0.35
CTNND1-224ENST00000530068 ROBO1Q9Y6N7 1651 aa17.23■□□□□ 0.35
CTNND1-224ENST00000530068 ANKRD50Q9ULJ7 1429 aa17.21■□□□□ 0.35
CTNND1-224ENST00000530068 RIMS2Q9UQ26 1411 aa17.21■□□□□ 0.35
CTNND1-224ENST00000530068 C14orf37Q86TY3 774 aa17.21■□□□□ 0.35
CTNND1-224ENST00000530068 ZFYVE9O95405 1425 aa17.21■□□□□ 0.34
CTNND1-224ENST00000530068 FAM50AQ14320 339 aaKnown RBP17.2■□□□□ 0.34
CTNND1-224ENST00000530068 CADPS2Q86UW7 1296 aa17.2■□□□□ 0.34
CTNND1-224ENST00000530068 SPATA31A6Q5VVP1 1343 aa17.2■□□□□ 0.34
CTNND1-224ENST00000530068 CHGAP10645 457 aaKnown RBP17.18■□□□□ 0.34
CTNND1-224ENST00000530068 ATF3P18847 181 aa17.18■□□□□ 0.34
CTNND1-224ENST00000530068 ZNF772Q68DY9 489 aaPredicted RBP17.18■□□□□ 0.34
CTNND1-224ENST00000530068 C19orf44Q9H6X5 657 aa17.18■□□□□ 0.34
CTNND1-224ENST00000530068 PIK3R4Q99570 1358 aa17.17■□□□□ 0.34
CTNND1-224ENST00000530068 MEX3CQ5U5Q3 659 aaKnown RBP17.17■□□□□ 0.34
CTNND1-224ENST00000530068 PHLPP1O60346 1717 aa17.13■□□□□ 0.33
CTNND1-224ENST00000530068 CHD2O14647 1828 aaKnown RBP17.1■□□□□ 0.33
CTNND1-224ENST00000530068 ADAMTS13Q76LX8 1427 aa17.1■□□□□ 0.33
CTNND1-224ENST00000530068 DIP2AQ14689 1571 aa17.1■□□□□ 0.33
CTNND1-224ENST00000530068 AMOTL2Q9Y2J4 779 aa17.09■□□□□ 0.33
CTNND1-224ENST00000530068 TMEM131LA2VDJ0 1609 aa17.09■□□□□ 0.33
CTNND1-224ENST00000530068 COL16A1Q07092 1604 aaPredicted RBP17.08■□□□□ 0.32
CTNND1-224ENST00000530068 ROCK1Q13464 1354 aa17.07■□□□□ 0.32
CTNND1-224ENST00000530068 RXRBP28702 533 aa17.07■□□□□ 0.32
CTNND1-224ENST00000530068 NUTM2DQ5VT03 806 aaPredicted RBP17.07■□□□□ 0.32
CTNND1-224ENST00000530068 AHDC1Q5TGY3 1603 aaPredicted RBP17.07■□□□□ 0.32
CTNND1-224ENST00000530068 DCCP43146 1447 aa17.06■□□□□ 0.32
CTNND1-224ENST00000530068 BRINP3Q76B58 766 aa17.06■□□□□ 0.32
CTNND1-224ENST00000530068 UPF1Q92900 1129 aaKnown RBP eCLIP17.06■□□□□ 0.32
CTNND1-224ENST00000530068 TRIM52Q96A61 297 aa17.05■□□□□ 0.32
CTNND1-224ENST00000530068 TRPM2O94759 1503 aa17.05■□□□□ 0.32
CTNND1-224ENST00000530068 NUP155O75694 1391 aa17.04■□□□□ 0.32
CTNND1-224ENST00000530068 GCC2Q8IWJ2 1684 aa17.04■□□□□ 0.32
CTNND1-224ENST00000530068 LRP6O75581 1613 aa17.04■□□□□ 0.32
CTNND1-224ENST00000530068 UNC13BO14795 1591 aa17.03■□□□□ 0.32
CTNND1-224ENST00000530068 NUTM2BA6NNL0 878 aaPredicted RBP17.02■□□□□ 0.32
CTNND1-224ENST00000530068 NUTM2EB1AL46 878 aaPredicted RBP17.02■□□□□ 0.32
CTNND1-224ENST00000530068 NUTM2AQ8IVF1 878 aaPredicted RBP17.02■□□□□ 0.32
CTNND1-224ENST00000530068 LRRC59Q96AG4 307 aaKnown RBP17.02■□□□□ 0.32
CTNND1-224ENST00000530068 CDK12Q9NYV4 1490 aaPredicted RBP17.01■□□□□ 0.31
CTNND1-224ENST00000530068 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.01■□□□□ 0.31
CTNND1-224ENST00000530068 PTPRUQ92729 1446 aa17■□□□□ 0.31
CTNND1-224ENST00000530068 SETD5Q9C0A6 1442 aa17■□□□□ 0.31
CTNND1-224ENST00000530068 MYO5BQ9ULV0 1848 aa16.99■□□□□ 0.31
CTNND1-224ENST00000530068 ZNF326Q5BKZ1 582 aaKnown RBP16.99■□□□□ 0.31
CTNND1-224ENST00000530068 SHPRHQ149N8 1683 aa16.99■□□□□ 0.31
CTNND1-224ENST00000530068 AFF2P51816 1311 aa16.98■□□□□ 0.31
CTNND1-224ENST00000530068 IQGAP3Q86VI3 1631 aa16.97■□□□□ 0.31
CTNND1-224ENST00000530068 SETD1AO15047 1707 aaKnown RBP16.97■□□□□ 0.31
CTNND1-224ENST00000530068 E9PCH4 1651 aa16.97■□□□□ 0.31
CTNND1-224ENST00000530068 ASXL1Q8IXJ9 1541 aa16.96■□□□□ 0.3
CTNND1-224ENST00000530068 RBM6P78332 1123 aaKnown RBP16.95■□□□□ 0.3
CTNND1-224ENST00000530068 MST1RQ04912 1400 aa16.95■□□□□ 0.3
CTNND1-224ENST00000530068 QTRT2Q9H974 415 aaKnown RBP16.94■□□□□ 0.3
CTNND1-224ENST00000530068 SETBP1Q9Y6X0 1596 aa16.94■□□□□ 0.3
CTNND1-224ENST00000530068 ADGRL3Q9HAR2 1447 aa16.93■□□□□ 0.3
CTNND1-224ENST00000530068 ITGAEP38570 1179 aa16.92■□□□□ 0.3
CTNND1-224ENST00000530068 NGLY1Q96IV0 654 aa16.92■□□□□ 0.3
CTNND1-224ENST00000530068 C8orf37Q96NL8 207 aa16.92■□□□□ 0.3
CTNND1-224ENST00000530068 METP08581 1390 aa16.91■□□□□ 0.3
CTNND1-224ENST00000530068 PNPLA6Q8IY17 1366 aa16.9■□□□□ 0.3
CTNND1-224ENST00000530068 XRN1Q8IZH2 1706 aaKnown RBP16.9■□□□□ 0.3
CTNND1-224ENST00000530068 FOXD1Q16676 465 aa16.89■□□□□ 0.29
CTNND1-224ENST00000530068 VGFO15240 615 aaPredicted RBP16.88■□□□□ 0.29
CTNND1-224ENST00000530068 DDX17Q92841 729 aaKnown RBP16.86■□□□□ 0.29
CTNND1-224ENST00000530068 C1orf167Q5SNV9 1468 aa16.86■□□□□ 0.29
CTNND1-224ENST00000530068 NHSL1Q5SYE7 1610 aa16.85■□□□□ 0.29
CTNND1-224ENST00000530068 NRXN3Q9Y4C0 1643 aa16.85■□□□□ 0.29
CTNND1-224ENST00000530068 ADAMTS2O95450 1211 aa16.85■□□□□ 0.29
CTNND1-224ENST00000530068 RGS12O14924 1447 aa16.85■□□□□ 0.29
CTNND1-224ENST00000530068 TRPC5Q9UL62 973 aaPredicted RBP16.84■□□□□ 0.29
CTNND1-224ENST00000530068 SOS2Q07890 1332 aaPredicted RBP16.84■□□□□ 0.29
CTNND1-224ENST00000530068 PTCH1Q13635 1447 aa16.84■□□□□ 0.29
CTNND1-224ENST00000530068 RPGRIP1LQ68CZ1 1315 aa16.83■□□□□ 0.28
CTNND1-224ENST00000530068 ATAD2Q6PL18 1390 aa16.83■□□□□ 0.28
CTNND1-224ENST00000530068 USP21Q9UK80 565 aa16.83■□□□□ 0.28
CTNND1-224ENST00000530068 SPHKAPQ2M3C7 1700 aa16.82■□□□□ 0.28
CTNND1-224ENST00000530068 FNBP4Q8N3X1 1017 aaPredicted RBP16.81■□□□□ 0.28
CTNND1-224ENST00000530068 ORAI2Q96SN7 254 aa16.81■□□□□ 0.28
CTNND1-224ENST00000530068 NEXMIFQ5QGS0 1516 aa16.8■□□□□ 0.28
CTNND1-224ENST00000530068 HFM1A2PYH4 1435 aa16.79■□□□□ 0.28
CTNND1-224ENST00000530068 PRAG1Q86YV5 1406 aa16.79■□□□□ 0.28
CTNND1-224ENST00000530068 ROBO2Q9HCK4 1378 aa16.78■□□□□ 0.28
CTNND1-224ENST00000530068 NPHP3Q7Z494 1330 aa16.78■□□□□ 0.28
CTNND1-224ENST00000530068 CCDC125Q86Z20 511 aa16.77■□□□□ 0.28
CTNND1-224ENST00000530068 ZRANB1Q9UGI0 708 aa16.76■□□□□ 0.27
CTNND1-224ENST00000530068 LAMC1P11047 1609 aa16.75■□□□□ 0.27
CTNND1-224ENST00000530068 CLTCL1P53675 1640 aa16.75■□□□□ 0.27
CTNND1-224ENST00000530068 NALCNQ8IZF0 1738 aa16.75■□□□□ 0.27
CTNND1-224ENST00000530068 LRPPRCP42704 1394 aaKnown RBP16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms