RNA–Protein interactions for RNA: ENST00000529878.1

SCN4B-204, Transcript of sodium voltage-gated channel beta subunit 4, humanhuman

TSL 4 BASIC

Gene SCN4B, Length 566 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4B-204ENST00000529878 KDM5AP29375 1690 aaKnown RBP23.77■■□□□ 1.4
SCN4B-204ENST00000529878 ADGRB3O60242 1522 aa23.77■■□□□ 1.4
SCN4B-204ENST00000529878 KCNA6P17658 529 aa23.76■■□□□ 1.39
SCN4B-204ENST00000529878 FAM135BQ49AJ0 1406 aa23.75■■□□□ 1.39
SCN4B-204ENST00000529878 RGS17Q9UGC6 210 aaPredicted RBP23.74■■□□□ 1.39
SCN4B-204ENST00000529878 PROSER2Q86WR7 435 aaPredicted RBP23.71■■□□□ 1.39
SCN4B-204ENST00000529878 SLC52A1Q9NWF4 448 aa23.71■■□□□ 1.39
SCN4B-204ENST00000529878 MYO5BQ9ULV0 1848 aa23.7■■□□□ 1.38
SCN4B-204ENST00000529878 TMEM94Q12767 1356 aa23.69■■□□□ 1.38
SCN4B-204ENST00000529878 SLC26A8Q96RN1 970 aa23.69■■□□□ 1.38
SCN4B-204ENST00000529878 SPHKAPQ2M3C7 1700 aa23.67■■□□□ 1.38
SCN4B-204ENST00000529878 CHGAP10645 457 aaKnown RBP23.67■■□□□ 1.38
SCN4B-204ENST00000529878 XIRP1Q702N8 1843 aaKnown RBP23.66■■□□□ 1.38
SCN4B-204ENST00000529878 TMEM131LA2VDJ0 1609 aa23.66■■□□□ 1.38
SCN4B-204ENST00000529878 HDGFP51858 240 aaKnown RBP23.65■■□□□ 1.38
SCN4B-204ENST00000529878 BCANQ96GW7 911 aa23.65■■□□□ 1.38
SCN4B-204ENST00000529878 TRIM52Q96A61 297 aa23.62■■□□□ 1.37
SCN4B-204ENST00000529878 RBM33Q96EV2 1170 aaKnown RBP23.61■■□□□ 1.37
SCN4B-204ENST00000529878 ZFYVE9O95405 1425 aa23.6■■□□□ 1.37
SCN4B-204ENST00000529878 RIMS2Q9UQ26 1411 aa23.6■■□□□ 1.37
SCN4B-204ENST00000529878 SLAIN2Q9P270 581 aa23.6■■□□□ 1.37
SCN4B-204ENST00000529878 ACIN1Q9UKV3 1341 aaKnown RBP23.59■■□□□ 1.37
SCN4B-204ENST00000529878 NUTM2DQ5VT03 806 aaPredicted RBP23.58■■□□□ 1.37
SCN4B-204ENST00000529878 POTEAQ6S8J7 498 aa23.58■■□□□ 1.37
SCN4B-204ENST00000529878 MSH6P52701 1360 aa23.57■■□□□ 1.36
SCN4B-204ENST00000529878 PPP1R15AO75807 674 aaPredicted RBP23.57■■□□□ 1.36
SCN4B-204ENST00000529878 SETD5Q9C0A6 1442 aa23.56■■□□□ 1.36
SCN4B-204ENST00000529878 CLTCL1P53675 1640 aa23.54■■□□□ 1.36
SCN4B-204ENST00000529878 NKTRP30414 1462 aaKnown RBP23.54■■□□□ 1.36
SCN4B-204ENST00000529878 TRPM2O94759 1503 aa23.54■■□□□ 1.36
SCN4B-204ENST00000529878 TBX22Q9Y458 520 aa23.53■■□□□ 1.36
SCN4B-204ENST00000529878 ROBO1Q9Y6N7 1651 aa23.52■■□□□ 1.36
SCN4B-204ENST00000529878 KIF1BO60333 1816 aa23.52■■□□□ 1.36
SCN4B-204ENST00000529878 PLEKHG1Q9ULL1 1385 aa23.52■■□□□ 1.36
SCN4B-204ENST00000529878 ABCF1Q8NE71 845 aaKnown RBP eCLIP23.51■■□□□ 1.35
SCN4B-204ENST00000529878 SLC4A1APQ9BWU0 796 aaKnown RBP23.51■■□□□ 1.35
SCN4B-204ENST00000529878 JCADQ9P266 1359 aa23.48■■□□□ 1.35
SCN4B-204ENST00000529878 NWD1Q149M9 1564 aa23.48■■□□□ 1.35
SCN4B-204ENST00000529878 FOXD1Q16676 465 aa23.47■■□□□ 1.35
SCN4B-204ENST00000529878 ZNF326Q5BKZ1 582 aaKnown RBP23.47■■□□□ 1.35
SCN4B-204ENST00000529878 NCOA3Q9Y6Q9 1424 aa23.47■■□□□ 1.35
SCN4B-204ENST00000529878 RAB3GAP2Q9H2M9 1393 aa23.45■■□□□ 1.34
SCN4B-204ENST00000529878 C14orf37Q86TY3 774 aa23.44■■□□□ 1.34
SCN4B-204ENST00000529878 CADPS2Q86UW7 1296 aa23.43■■□□□ 1.34
SCN4B-204ENST00000529878 C19orf44Q9H6X5 657 aa23.43■■□□□ 1.34
SCN4B-204ENST00000529878 CHD2O14647 1828 aaKnown RBP23.43■■□□□ 1.34
SCN4B-204ENST00000529878 ADAMTS13Q76LX8 1427 aa23.42■■□□□ 1.34
SCN4B-204ENST00000529878 ATF3P18847 181 aa23.4■■□□□ 1.34
SCN4B-204ENST00000529878 MPHOSPH9Q99550 1183 aa23.4■■□□□ 1.34
SCN4B-204ENST00000529878 NEXMIFQ5QGS0 1516 aa23.39■■□□□ 1.34
SCN4B-204ENST00000529878 SPATA31A6Q5VVP1 1343 aa23.39■■□□□ 1.34
SCN4B-204ENST00000529878 HRCP23327 699 aa23.39■■□□□ 1.33
SCN4B-204ENST00000529878 PHLPP1O60346 1717 aa23.39■■□□□ 1.33
SCN4B-204ENST00000529878 PIK3R4Q99570 1358 aa23.39■■□□□ 1.33
SCN4B-204ENST00000529878 DIP2AQ14689 1571 aa23.38■■□□□ 1.33
SCN4B-204ENST00000529878 NRXN3Q9Y4C0 1643 aa23.37■■□□□ 1.33
SCN4B-204ENST00000529878 ZNF772Q68DY9 489 aaPredicted RBP23.37■■□□□ 1.33
SCN4B-204ENST00000529878 MEX3CQ5U5Q3 659 aaKnown RBP23.35■■□□□ 1.33
SCN4B-204ENST00000529878 SETBP1Q9Y6X0 1596 aa23.34■■□□□ 1.33
SCN4B-204ENST00000529878 AMOTL2Q9Y2J4 779 aa23.33■■□□□ 1.33
SCN4B-204ENST00000529878 CCDC144AA2RUR9 1427 aa23.31■■□□□ 1.32
SCN4B-204ENST00000529878 PTPRUQ92729 1446 aa23.31■■□□□ 1.32
SCN4B-204ENST00000529878 PPLO60437 1756 aa23.3■■□□□ 1.32
SCN4B-204ENST00000529878 COL16A1Q07092 1604 aaPredicted RBP23.3■■□□□ 1.32
SCN4B-204ENST00000529878 METP08581 1390 aa23.27■■□□□ 1.32
SCN4B-204ENST00000529878 SIPA1L2Q9P2F8 1722 aaPredicted RBP23.26■■□□□ 1.31
SCN4B-204ENST00000529878 IFT172Q9UG01 1749 aa23.26■■□□□ 1.31
SCN4B-204ENST00000529878 BRINP3Q76B58 766 aa23.26■■□□□ 1.31
SCN4B-204ENST00000529878 RXRBP28702 533 aa23.25■■□□□ 1.31
SCN4B-204ENST00000529878 XRN1Q8IZH2 1706 aaKnown RBP23.25■■□□□ 1.31
SCN4B-204ENST00000529878 RGL3Q3MIN7 710 aa23.24■■□□□ 1.31
SCN4B-204ENST00000529878 UPF1Q92900 1129 aaKnown RBP eCLIP23.24■■□□□ 1.31
SCN4B-204ENST00000529878 AHDC1Q5TGY3 1603 aaPredicted RBP23.23■■□□□ 1.31
SCN4B-204ENST00000529878 RPGRIP1LQ68CZ1 1315 aa23.23■■□□□ 1.31
SCN4B-204ENST00000529878 LRP6O75581 1613 aa23.22■■□□□ 1.31
SCN4B-204ENST00000529878 SPATA31E1Q6ZUB1 1445 aa23.22■■□□□ 1.31
SCN4B-204ENST00000529878 NUTM2BA6NNL0 878 aaPredicted RBP23.21■■□□□ 1.31
SCN4B-204ENST00000529878 NUTM2EB1AL46 878 aaPredicted RBP23.21■■□□□ 1.31
SCN4B-204ENST00000529878 VGFO15240 615 aaPredicted RBP23.21■■□□□ 1.31
SCN4B-204ENST00000529878 NUTM2AQ8IVF1 878 aaPredicted RBP23.21■■□□□ 1.31
SCN4B-204ENST00000529878 LRRC59Q96AG4 307 aaKnown RBP23.21■■□□□ 1.31
SCN4B-204ENST00000529878 SETD1AO15047 1707 aaKnown RBP23.2■■□□□ 1.3
SCN4B-204ENST00000529878 DCCP43146 1447 aa23.2■■□□□ 1.3
SCN4B-204ENST00000529878 SHPRHQ149N8 1683 aa23.18■■□□□ 1.3
SCN4B-204ENST00000529878 ANKRD30BQ9BXX2 1392 aa23.17■■□□□ 1.3
SCN4B-204ENST00000529878 ADGRF5Q8IZF2 1346 aa23.16■■□□□ 1.3
SCN4B-204ENST00000529878 AFF2P51816 1311 aa23.12■■□□□ 1.29
SCN4B-204ENST00000529878 TRIM26Q12899 539 aaPredicted RBP23.12■■□□□ 1.29
SCN4B-204ENST00000529878 MST1RQ04912 1400 aa23.11■■□□□ 1.29
SCN4B-204ENST00000529878 CDK12Q9NYV4 1490 aaPredicted RBP23.11■■□□□ 1.29
SCN4B-204ENST00000529878 QTRT2Q9H974 415 aaKnown RBP23.1■■□□□ 1.29
SCN4B-204ENST00000529878 NALCNQ8IZF0 1738 aa23.1■■□□□ 1.29
SCN4B-204ENST00000529878 ASXL1Q8IXJ9 1541 aa23.09■■□□□ 1.29
SCN4B-204ENST00000529878 ROBO2Q9HCK4 1378 aa23.09■■□□□ 1.29
SCN4B-204ENST00000529878 RBM6P78332 1123 aaKnown RBP23.08■■□□□ 1.29
SCN4B-204ENST00000529878 PIK3C2GO75747 1445 aa23.07■■□□□ 1.28
SCN4B-204ENST00000529878 PTCH1Q13635 1447 aa23.07■■□□□ 1.28
SCN4B-204ENST00000529878 MYOM2P54296 1465 aa23.06■■□□□ 1.28
SCN4B-204ENST00000529878 C8orf37Q96NL8 207 aa23.06■■□□□ 1.28
SCN4B-204ENST00000529878 ADGRL3Q9HAR2 1447 aa23.06■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms