RNA–Protein interactions for RNA: ENST00000528147.1

CDC27-205, Transcript of cell division cycle 27, humanhuman

TSL 4

Gene CDC27, Length 463 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-205ENST00000528147 NCBP3Q53F19 620 aaKnown RBP21.68■■□□□ 1.06
CDC27-205ENST00000528147 UNC13BO14795 1591 aa21.68■■□□□ 1.06
CDC27-205ENST00000528147 MYO5BQ9ULV0 1848 aa21.68■■□□□ 1.06
CDC27-205ENST00000528147 GCC2Q8IWJ2 1684 aa21.66■■□□□ 1.06
CDC27-205ENST00000528147 EID1Q9Y6B2 187 aa21.65■■□□□ 1.06
CDC27-205ENST00000528147 NWD1Q149M9 1564 aa21.64■■□□□ 1.05
CDC27-205ENST00000528147 FAM50AQ14320 339 aaKnown RBP21.63■■□□□ 1.05
CDC27-205ENST00000528147 ZFYVE9O95405 1425 aa21.62■■□□□ 1.05
CDC27-205ENST00000528147 TMEM131LA2VDJ0 1609 aa21.62■■□□□ 1.05
CDC27-205ENST00000528147 E9PCH4 1651 aa21.6■■□□□ 1.05
CDC27-205ENST00000528147 SLC52A1Q9NWF4 448 aa21.6■■□□□ 1.05
CDC27-205ENST00000528147 STAG3Q9UJ98 1225 aa21.59■■□□□ 1.05
CDC27-205ENST00000528147 IQGAP3Q86VI3 1631 aa21.58■■□□□ 1.05
CDC27-205ENST00000528147 ROCK1Q13464 1354 aa21.58■■□□□ 1.04
CDC27-205ENST00000528147 TMEM94Q12767 1356 aa21.57■■□□□ 1.04
CDC27-205ENST00000528147 NKTRP30414 1462 aaKnown RBP21.57■■□□□ 1.04
CDC27-205ENST00000528147 KCNA6P17658 529 aa21.56■■□□□ 1.04
CDC27-205ENST00000528147 CHD2O14647 1828 aaKnown RBP21.55■■□□□ 1.04
CDC27-205ENST00000528147 SLC26A8Q96RN1 970 aa21.55■■□□□ 1.04
CDC27-205ENST00000528147 FAM135BQ49AJ0 1406 aa21.53■■□□□ 1.04
CDC27-205ENST00000528147 PLEKHG1Q9ULL1 1385 aa21.52■■□□□ 1.04
CDC27-205ENST00000528147 CACNB1Q02641 598 aaPredicted RBP21.52■■□□□ 1.04
CDC27-205ENST00000528147 ROBO1Q9Y6N7 1651 aa21.51■■□□□ 1.03
CDC27-205ENST00000528147 RIMS2Q9UQ26 1411 aa21.51■■□□□ 1.03
CDC27-205ENST00000528147 RBM33Q96EV2 1170 aaKnown RBP21.47■■□□□ 1.03
CDC27-205ENST00000528147 ADAMTS13Q76LX8 1427 aa21.46■■□□□ 1.03
CDC27-205ENST00000528147 PROSER2Q86WR7 435 aaPredicted RBP21.45■■□□□ 1.02
CDC27-205ENST00000528147 DIP2AQ14689 1571 aa21.44■■□□□ 1.02
CDC27-205ENST00000528147 RGS17Q9UGC6 210 aaPredicted RBP21.42■■□□□ 1.02
CDC27-205ENST00000528147 SPHKAPQ2M3C7 1700 aa21.41■■□□□ 1.02
CDC27-205ENST00000528147 NUP155O75694 1391 aa21.41■■□□□ 1.02
CDC27-205ENST00000528147 TBX22Q9Y458 520 aa21.41■■□□□ 1.02
CDC27-205ENST00000528147 NRXN3Q9Y4C0 1643 aa21.4■■□□□ 1.02
CDC27-205ENST00000528147 MSH6P52701 1360 aa21.38■■□□□ 1.01
CDC27-205ENST00000528147 NCOA3Q9Y6Q9 1424 aa21.38■■□□□ 1.01
CDC27-205ENST00000528147 PPP1R15AO75807 674 aaPredicted RBP21.37■■□□□ 1.01
CDC27-205ENST00000528147 HDGFP51858 240 aaKnown RBP21.37■■□□□ 1.01
CDC27-205ENST00000528147 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.37■■□□□ 1.01
CDC27-205ENST00000528147 PIK3R4Q99570 1358 aa21.36■■□□□ 1.01
CDC27-205ENST00000528147 PHLPP1O60346 1717 aa21.36■■□□□ 1.01
CDC27-205ENST00000528147 SIPA1L2Q9P2F8 1722 aaPredicted RBP21.36■■□□□ 1.01
CDC27-205ENST00000528147 BCANQ96GW7 911 aa21.36■■□□□ 1.01
CDC27-205ENST00000528147 RNF39Q9H2S5 420 aa21.36■■□□□ 1.01
CDC27-205ENST00000528147 PPARGC1BQ86YN6 1023 aaKnown RBP21.35■■□□□ 1.01
CDC27-205ENST00000528147 COL16A1Q07092 1604 aaPredicted RBP21.35■■□□□ 1.01
CDC27-205ENST00000528147 CHGAP10645 457 aaKnown RBP21.34■■□□□ 1.01
CDC27-205ENST00000528147 ITGAEP38570 1179 aa21.34■■□□□ 1.01
CDC27-205ENST00000528147 NUTM2DQ5VT03 806 aaPredicted RBP21.34■■□□□ 1.01
CDC27-205ENST00000528147 SLAIN2Q9P270 581 aa21.34■■□□□ 1.01
CDC27-205ENST00000528147 PTPRUQ92729 1446 aa21.34■■□□□ 1.01
CDC27-205ENST00000528147 RRBP1Q9P2E9 1410 aaKnown RBP21.34■■□□□ 1.01
CDC27-205ENST00000528147 SETBP1Q9Y6X0 1596 aa21.34■■□□□ 1.01
CDC27-205ENST00000528147 XRN1Q8IZH2 1706 aaKnown RBP21.34■■□□□ 1.01
CDC27-205ENST00000528147 TRPM2O94759 1503 aa21.34■■□□□ 1.01
CDC27-205ENST00000528147 CLTCL1P53675 1640 aa21.31■■□□□ 1
CDC27-205ENST00000528147 NAIPQ13075 1403 aa21.29■■□□□ 1
CDC27-205ENST00000528147 AHDC1Q5TGY3 1603 aaPredicted RBP21.28■■□□□ 1
CDC27-205ENST00000528147 NEXMIFQ5QGS0 1516 aa21.28■■□□□ 1
CDC27-205ENST00000528147 POTEAQ6S8J7 498 aa21.25■□□□□ 0.99
CDC27-205ENST00000528147 JCADQ9P266 1359 aa21.24■□□□□ 0.99
CDC27-205ENST00000528147 AMOTL2Q9Y2J4 779 aa21.24■□□□□ 0.99
CDC27-205ENST00000528147 KIF1BO60333 1816 aa21.23■□□□□ 0.99
CDC27-205ENST00000528147 C19orf44Q9H6X5 657 aa21.23■□□□□ 0.99
CDC27-205ENST00000528147 SHPRHQ149N8 1683 aa21.23■□□□□ 0.99
CDC27-205ENST00000528147 DCCP43146 1447 aa21.22■□□□□ 0.99
CDC27-205ENST00000528147 SETD1AO15047 1707 aaKnown RBP21.22■□□□□ 0.99
CDC27-205ENST00000528147 LRP6O75581 1613 aa21.22■□□□□ 0.99
CDC27-205ENST00000528147 METP08581 1390 aa21.22■□□□□ 0.99
CDC27-205ENST00000528147 CADPS2Q86UW7 1296 aa21.21■□□□□ 0.99
CDC27-205ENST00000528147 NPM3O75607 178 aaKnown RBP21.2■□□□□ 0.98
CDC27-205ENST00000528147 NALCNQ8IZF0 1738 aa21.19■□□□□ 0.98
CDC27-205ENST00000528147 HFM1A2PYH4 1435 aa21.19■□□□□ 0.98
CDC27-205ENST00000528147 C14orf37Q86TY3 774 aa21.18■□□□□ 0.98
CDC27-205ENST00000528147 NHSL1Q5SYE7 1610 aa21.18■□□□□ 0.98
CDC27-205ENST00000528147 MST1RQ04912 1400 aa21.17■□□□□ 0.98
CDC27-205ENST00000528147 ASXL1Q8IXJ9 1541 aa21.16■□□□□ 0.98
CDC27-205ENST00000528147 ATF3P18847 181 aa21.16■□□□□ 0.98
CDC27-205ENST00000528147 BRINP3Q76B58 766 aa21.16■□□□□ 0.98
CDC27-205ENST00000528147 ZNF326Q5BKZ1 582 aaKnown RBP21.14■□□□□ 0.97
CDC27-205ENST00000528147 ADGRL3Q9HAR2 1447 aa21.13■□□□□ 0.97
CDC27-205ENST00000528147 SPATA31A6Q5VVP1 1343 aa21.13■□□□□ 0.97
CDC27-205ENST00000528147 PPLO60437 1756 aa21.13■□□□□ 0.97
CDC27-205ENST00000528147 PRAG1Q86YV5 1406 aa21.12■□□□□ 0.97
CDC27-205ENST00000528147 C1QBPQ07021 282 aaKnown RBP21.12■□□□□ 0.97
CDC27-205ENST00000528147 SETD5Q9C0A6 1442 aa21.1■□□□□ 0.97
CDC27-205ENST00000528147 LAMC1P11047 1609 aa21.09■□□□□ 0.97
CDC27-205ENST00000528147 PTCH1Q13635 1447 aa21.09■□□□□ 0.97
CDC27-205ENST00000528147 ROBO2Q9HCK4 1378 aa21.04■□□□□ 0.96
CDC27-205ENST00000528147 IFT172Q9UG01 1749 aa21.03■□□□□ 0.96
CDC27-205ENST00000528147 RPGRIP1LQ68CZ1 1315 aa21.02■□□□□ 0.95
CDC27-205ENST00000528147 C1orf167Q5SNV9 1468 aa21.01■□□□□ 0.95
CDC27-205ENST00000528147 VGFO15240 615 aaPredicted RBP21.01■□□□□ 0.95
CDC27-205ENST00000528147 TRIM52Q96A61 297 aa21.01■□□□□ 0.95
CDC27-205ENST00000528147 SLC4A1APQ9BWU0 796 aaKnown RBP21.01■□□□□ 0.95
CDC27-205ENST00000528147 DDX17Q92841 729 aaKnown RBP20.99■□□□□ 0.95
CDC27-205ENST00000528147 PNPLA6Q8IY17 1366 aa20.98■□□□□ 0.95
CDC27-205ENST00000528147 SPATA31E1Q6ZUB1 1445 aa20.98■□□□□ 0.95
CDC27-205ENST00000528147 ZNF772Q68DY9 489 aaPredicted RBP20.98■□□□□ 0.95
CDC27-205ENST00000528147 MEX3CQ5U5Q3 659 aaKnown RBP20.96■□□□□ 0.95
CDC27-205ENST00000528147 CDC42BPGQ6DT37 1551 aa20.95■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms