RNA–Protein interactions for RNA: ENST00000527962.5

CTTN-212, Transcript of cortactin, humanhuman

TSL 2

Gene CTTN, Length 587 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTTN-212ENST00000527962 MSH6P52701 1360 aa24.26■■□□□ 1.47
CTTN-212ENST00000527962 ABCF1Q8NE71 845 aaKnown RBP eCLIP24.25■■□□□ 1.47
CTTN-212ENST00000527962 NKTRP30414 1462 aaKnown RBP24.25■■□□□ 1.47
CTTN-212ENST00000527962 RBM33Q96EV2 1170 aaKnown RBP24.23■■□□□ 1.47
CTTN-212ENST00000527962 PLEKHG1Q9ULL1 1385 aa24.22■■□□□ 1.47
CTTN-212ENST00000527962 CHGAP10645 457 aaKnown RBP24.21■■□□□ 1.47
CTTN-212ENST00000527962 SLAIN2Q9P270 581 aa24.2■■□□□ 1.46
CTTN-212ENST00000527962 RIMS2Q9UQ26 1411 aa24.19■■□□□ 1.46
CTTN-212ENST00000527962 XIRP1Q702N8 1843 aaKnown RBP24.19■■□□□ 1.46
CTTN-212ENST00000527962 TBX22Q9Y458 520 aa24.19■■□□□ 1.46
CTTN-212ENST00000527962 RGS17Q9UGC6 210 aaPredicted RBP24.17■■□□□ 1.46
CTTN-212ENST00000527962 ZFYVE9O95405 1425 aa24.17■■□□□ 1.46
CTTN-212ENST00000527962 C14orf37Q86TY3 774 aa24.16■■□□□ 1.46
CTTN-212ENST00000527962 NWD1Q149M9 1564 aa24.16■■□□□ 1.46
CTTN-212ENST00000527962 ROCK1Q13464 1354 aa24.16■■□□□ 1.46
CTTN-212ENST00000527962 NCOA3Q9Y6Q9 1424 aa24.13■■□□□ 1.45
CTTN-212ENST00000527962 ROBO1Q9Y6N7 1651 aa24.12■■□□□ 1.45
CTTN-212ENST00000527962 NUP155O75694 1391 aa24.09■■□□□ 1.45
CTTN-212ENST00000527962 PIK3R4Q99570 1358 aa24.09■■□□□ 1.45
CTTN-212ENST00000527962 JCADQ9P266 1359 aa24.09■■□□□ 1.45
CTTN-212ENST00000527962 ATF3P18847 181 aa24.09■■□□□ 1.45
CTTN-212ENST00000527962 CADPS2Q86UW7 1296 aa24.09■■□□□ 1.45
CTTN-212ENST00000527962 TMEM131LA2VDJ0 1609 aa24.09■■□□□ 1.45
CTTN-212ENST00000527962 C19orf44Q9H6X5 657 aa24.08■■□□□ 1.45
CTTN-212ENST00000527962 UNC13BO14795 1591 aa24.08■■□□□ 1.44
CTTN-212ENST00000527962 NUTM2DQ5VT03 806 aaPredicted RBP24.07■■□□□ 1.44
CTTN-212ENST00000527962 GCC2Q8IWJ2 1684 aa24.07■■□□□ 1.44
CTTN-212ENST00000527962 ITGAEP38570 1179 aa24.06■■□□□ 1.44
CTTN-212ENST00000527962 POTEAQ6S8J7 498 aa24.05■■□□□ 1.44
CTTN-212ENST00000527962 DIP2AQ14689 1571 aa24.03■■□□□ 1.44
CTTN-212ENST00000527962 CHD2O14647 1828 aaKnown RBP24.03■■□□□ 1.44
CTTN-212ENST00000527962 ADAMTS13Q76LX8 1427 aa24.01■■□□□ 1.43
CTTN-212ENST00000527962 AMOTL2Q9Y2J4 779 aa24.01■■□□□ 1.43
CTTN-212ENST00000527962 SPATA31A6Q5VVP1 1343 aa24.01■■□□□ 1.43
CTTN-212ENST00000527962 IQGAP3Q86VI3 1631 aa23.99■■□□□ 1.43
CTTN-212ENST00000527962 E9PCH4 1651 aa23.99■■□□□ 1.43
CTTN-212ENST00000527962 MEX3CQ5U5Q3 659 aaKnown RBP23.99■■□□□ 1.43
CTTN-212ENST00000527962 PHLPP1O60346 1717 aa23.98■■□□□ 1.43
CTTN-212ENST00000527962 ZNF326Q5BKZ1 582 aaKnown RBP23.98■■□□□ 1.43
CTTN-212ENST00000527962 MYO5BQ9ULV0 1848 aa23.98■■□□□ 1.43
CTTN-212ENST00000527962 TRPM2O94759 1503 aa23.97■■□□□ 1.43
CTTN-212ENST00000527962 ZNF772Q68DY9 489 aaPredicted RBP23.95■■□□□ 1.42
CTTN-212ENST00000527962 DCCP43146 1447 aa23.9■■□□□ 1.42
CTTN-212ENST00000527962 COL16A1Q07092 1604 aaPredicted RBP23.89■■□□□ 1.42
CTTN-212ENST00000527962 BRINP3Q76B58 766 aa23.89■■□□□ 1.41
CTTN-212ENST00000527962 PPARGC1BQ86YN6 1023 aaKnown RBP23.88■■□□□ 1.41
CTTN-212ENST00000527962 SIPA1L2Q9P2F8 1722 aaPredicted RBP23.87■■□□□ 1.41
CTTN-212ENST00000527962 PTPRUQ92729 1446 aa23.87■■□□□ 1.41
CTTN-212ENST00000527962 AHDC1Q5TGY3 1603 aaPredicted RBP23.87■■□□□ 1.41
CTTN-212ENST00000527962 SETBP1Q9Y6X0 1596 aa23.83■■□□□ 1.41
CTTN-212ENST00000527962 LRRC59Q96AG4 307 aaKnown RBP23.83■■□□□ 1.41
CTTN-212ENST00000527962 NUTM2BA6NNL0 878 aaPredicted RBP23.82■■□□□ 1.4
CTTN-212ENST00000527962 NUTM2EB1AL46 878 aaPredicted RBP23.82■■□□□ 1.4
CTTN-212ENST00000527962 NUTM2AQ8IVF1 878 aaPredicted RBP23.82■■□□□ 1.4
CTTN-212ENST00000527962 METP08581 1390 aa23.81■■□□□ 1.4
CTTN-212ENST00000527962 LRP6O75581 1613 aa23.81■■□□□ 1.4
CTTN-212ENST00000527962 VGFO15240 615 aaPredicted RBP23.8■■□□□ 1.4
CTTN-212ENST00000527962 RXRBP28702 533 aa23.8■■□□□ 1.4
CTTN-212ENST00000527962 SPHKAPQ2M3C7 1700 aa23.79■■□□□ 1.4
CTTN-212ENST00000527962 TRIM52Q96A61 297 aa23.78■■□□□ 1.4
CTTN-212ENST00000527962 MST1RQ04912 1400 aa23.77■■□□□ 1.4
CTTN-212ENST00000527962 SHPRHQ149N8 1683 aa23.77■■□□□ 1.4
CTTN-212ENST00000527962 ASXL1Q8IXJ9 1541 aa23.77■■□□□ 1.4
CTTN-212ENST00000527962 SETD5Q9C0A6 1442 aa23.76■■□□□ 1.39
CTTN-212ENST00000527962 XRN1Q8IZH2 1706 aaKnown RBP23.76■■□□□ 1.39
CTTN-212ENST00000527962 ADGRL3Q9HAR2 1447 aa23.76■■□□□ 1.39
CTTN-212ENST00000527962 NRXN3Q9Y4C0 1643 aa23.74■■□□□ 1.39
CTTN-212ENST00000527962 RPGRIP1LQ68CZ1 1315 aa23.73■■□□□ 1.39
CTTN-212ENST00000527962 RRBP1Q9P2E9 1410 aaKnown RBP23.72■■□□□ 1.39
CTTN-212ENST00000527962 NAIPQ13075 1403 aa23.71■■□□□ 1.39
CTTN-212ENST00000527962 AFF2P51816 1311 aa23.71■■□□□ 1.39
CTTN-212ENST00000527962 NEXMIFQ5QGS0 1516 aa23.7■■□□□ 1.38
CTTN-212ENST00000527962 UPF1Q92900 1129 aaKnown RBP eCLIP23.7■■□□□ 1.38
CTTN-212ENST00000527962 SLC4A1APQ9BWU0 796 aaKnown RBP23.69■■□□□ 1.38
CTTN-212ENST00000527962 CLTCL1P53675 1640 aa23.69■■□□□ 1.38
CTTN-212ENST00000527962 C8orf37Q96NL8 207 aa23.68■■□□□ 1.38
CTTN-212ENST00000527962 CDK12Q9NYV4 1490 aaPredicted RBP23.67■■□□□ 1.38
CTTN-212ENST00000527962 SETD1AO15047 1707 aaKnown RBP23.67■■□□□ 1.38
CTTN-212ENST00000527962 PTCH1Q13635 1447 aa23.66■■□□□ 1.38
CTTN-212ENST00000527962 DDX17Q92841 729 aaKnown RBP23.65■■□□□ 1.38
CTTN-212ENST00000527962 QTRT2Q9H974 415 aaKnown RBP23.65■■□□□ 1.38
CTTN-212ENST00000527962 PNPLA6Q8IY17 1366 aa23.65■■□□□ 1.38
CTTN-212ENST00000527962 C1orf167Q5SNV9 1468 aa23.64■■□□□ 1.38
CTTN-212ENST00000527962 NHSL1Q5SYE7 1610 aa23.64■■□□□ 1.38
CTTN-212ENST00000527962 RBM6P78332 1123 aaKnown RBP23.64■■□□□ 1.37
CTTN-212ENST00000527962 NGLY1Q96IV0 654 aa23.64■■□□□ 1.37
CTTN-212ENST00000527962 KIF1BO60333 1816 aa23.63■■□□□ 1.37
CTTN-212ENST00000527962 HFM1A2PYH4 1435 aa23.63■■□□□ 1.37
CTTN-212ENST00000527962 ADAMTS2O95450 1211 aa23.61■■□□□ 1.37
CTTN-212ENST00000527962 ROBO2Q9HCK4 1378 aa23.61■■□□□ 1.37
CTTN-212ENST00000527962 ORAI2Q96SN7 254 aa23.59■■□□□ 1.37
CTTN-212ENST00000527962 SOS2Q07890 1332 aaPredicted RBP23.59■■□□□ 1.37
CTTN-212ENST00000527962 NALCNQ8IZF0 1738 aa23.57■■□□□ 1.36
CTTN-212ENST00000527962 PRAG1Q86YV5 1406 aa23.57■■□□□ 1.36
CTTN-212ENST00000527962 ESCO1Q5FWF5 840 aa23.54■■□□□ 1.36
CTTN-212ENST00000527962 NPHP3Q7Z494 1330 aa23.54■■□□□ 1.36
CTTN-212ENST00000527962 USP21Q9UK80 565 aa23.53■■□□□ 1.36
CTTN-212ENST00000527962 CCDC144AA2RUR9 1427 aa23.52■■□□□ 1.36
CTTN-212ENST00000527962 TRPC5Q9UL62 973 aaPredicted RBP23.52■■□□□ 1.36
CTTN-212ENST00000527962 LRPPRCP42704 1394 aaKnown RBP23.51■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms