RNA–Protein interactions for RNA: ENST00000527442.5

PKP3-205, Transcript of plakophilin 3, humanhuman

TSL 3

Gene PKP3, Length 847 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-205ENST00000527442 GCC2Q8IWJ2 1684 aa32.19■■■□□ 2.74
PKP3-205ENST00000527442 CHD2O14647 1828 aaKnown RBP32.16■■■□□ 2.74
PKP3-205ENST00000527442 PHLPP1O60346 1717 aa32.14■■■□□ 2.74
PKP3-205ENST00000527442 RPRD2Q5VT52 1461 aaKnown RBP32.14■■■□□ 2.74
PKP3-205ENST00000527442 ZFYVE9O95405 1425 aa32.13■■■□□ 2.73
PKP3-205ENST00000527442 POTEAQ6S8J7 498 aa32.13■■■□□ 2.73
PKP3-205ENST00000527442 SLC52A1Q9NWF4 448 aa32.13■■■□□ 2.73
PKP3-205ENST00000527442 TMEM131LA2VDJ0 1609 aa32.11■■■□□ 2.73
PKP3-205ENST00000527442 MSH6P52701 1360 aa32.1■■■□□ 2.73
PKP3-205ENST00000527442 BCANQ96GW7 911 aa32.09■■■□□ 2.73
PKP3-205ENST00000527442 ANKRD50Q9ULJ7 1429 aa32.08■■■□□ 2.73
PKP3-205ENST00000527442 PLEKHG1Q9ULL1 1385 aa32.07■■■□□ 2.73
PKP3-205ENST00000527442 SETD1AO15047 1707 aaKnown RBP32.06■■■□□ 2.72
PKP3-205ENST00000527442 RIMS2Q9UQ26 1411 aa32.06■■■□□ 2.72
PKP3-205ENST00000527442 UNC13BO14795 1591 aa32.04■■■□□ 2.72
PKP3-205ENST00000527442 COL16A1Q07092 1604 aaPredicted RBP32.04■■■□□ 2.72
PKP3-205ENST00000527442 PPARGC1BQ86YN6 1023 aaKnown RBP32.03■■■□□ 2.72
PKP3-205ENST00000527442 SLAIN2Q9P270 581 aa32.02■■■□□ 2.72
PKP3-205ENST00000527442 FAM50AQ14320 339 aaKnown RBP32.01■■■□□ 2.71
PKP3-205ENST00000527442 E9PCH4 1651 aa32■■■□□ 2.71
PKP3-205ENST00000527442 JCADQ9P266 1359 aa31.98■■■□□ 2.71
PKP3-205ENST00000527442 PPP1R15AO75807 674 aaPredicted RBP31.98■■■□□ 2.71
PKP3-205ENST00000527442 SIPA1L2Q9P2F8 1722 aaPredicted RBP31.95■■■□□ 2.7
PKP3-205ENST00000527442 ADAMTS13Q76LX8 1427 aa31.93■■■□□ 2.7
PKP3-205ENST00000527442 DIP2AQ14689 1571 aa31.93■■■□□ 2.7
PKP3-205ENST00000527442 LRP6O75581 1613 aa31.91■■■□□ 2.7
PKP3-205ENST00000527442 TBX22Q9Y458 520 aa31.91■■■□□ 2.7
PKP3-205ENST00000527442 NCOA3Q9Y6Q9 1424 aa31.91■■■□□ 2.7
PKP3-205ENST00000527442 IQGAP3Q86VI3 1631 aa31.9■■■□□ 2.7
PKP3-205ENST00000527442 HDGFP51858 240 aaKnown RBP31.9■■■□□ 2.7
PKP3-205ENST00000527442 CHGAP10645 457 aaKnown RBP31.88■■■□□ 2.69
PKP3-205ENST00000527442 AHDC1Q5TGY3 1603 aaPredicted RBP31.88■■■□□ 2.69
PKP3-205ENST00000527442 NUTM2DQ5VT03 806 aaPredicted RBP31.87■■■□□ 2.69
PKP3-205ENST00000527442 SHPRHQ149N8 1683 aa31.86■■■□□ 2.69
PKP3-205ENST00000527442 ABCF1Q8NE71 845 aaKnown RBP eCLIP31.86■■■□□ 2.69
PKP3-205ENST00000527442 C14orf37Q86TY3 774 aa31.84■■■□□ 2.69
PKP3-205ENST00000527442 TRPM2O94759 1503 aa31.83■■■□□ 2.69
PKP3-205ENST00000527442 RRBP1Q9P2E9 1410 aaKnown RBP31.82■■■□□ 2.68
PKP3-205ENST00000527442 PIK3R4Q99570 1358 aa31.81■■■□□ 2.68
PKP3-205ENST00000527442 SPATA31A6Q5VVP1 1343 aa31.79■■■□□ 2.68
PKP3-205ENST00000527442 PTPRUQ92729 1446 aa31.78■■■□□ 2.68
PKP3-205ENST00000527442 CADPS2Q86UW7 1296 aa31.78■■■□□ 2.68
PKP3-205ENST00000527442 C19orf44Q9H6X5 657 aa31.77■■■□□ 2.68
PKP3-205ENST00000527442 NRXN3Q9Y4C0 1643 aa31.77■■■□□ 2.68
PKP3-205ENST00000527442 ROCK1Q13464 1354 aa31.77■■■□□ 2.68
PKP3-205ENST00000527442 XRN1Q8IZH2 1706 aaKnown RBP31.76■■■□□ 2.67
PKP3-205ENST00000527442 ATF3P18847 181 aa31.75■■■□□ 2.67
PKP3-205ENST00000527442 MEX3CQ5U5Q3 659 aaKnown RBP31.73■■■□□ 2.67
PKP3-205ENST00000527442 SPHKAPQ2M3C7 1700 aa31.72■■■□□ 2.67
PKP3-205ENST00000527442 AMOTL2Q9Y2J4 779 aa31.71■■■□□ 2.67
PKP3-205ENST00000527442 NUP155O75694 1391 aa31.69■■■□□ 2.66
PKP3-205ENST00000527442 SETBP1Q9Y6X0 1596 aa31.69■■■□□ 2.66
PKP3-205ENST00000527442 BRINP3Q76B58 766 aa31.69■■■□□ 2.66
PKP3-205ENST00000527442 DCCP43146 1447 aa31.68■■■□□ 2.66
PKP3-205ENST00000527442 ZNF772Q68DY9 489 aaPredicted RBP31.68■■■□□ 2.66
PKP3-205ENST00000527442 ASXL1Q8IXJ9 1541 aa31.68■■■□□ 2.66
PKP3-205ENST00000527442 NHSL1Q5SYE7 1610 aa31.67■■■□□ 2.66
PKP3-205ENST00000527442 TRIM52Q96A61 297 aa31.65■■■□□ 2.66
PKP3-205ENST00000527442 TRIM26Q12899 539 aaPredicted RBP31.64■■■□□ 2.66
PKP3-205ENST00000527442 MST1RQ04912 1400 aa31.62■■■□□ 2.65
PKP3-205ENST00000527442 UPF1Q92900 1129 aaKnown RBP eCLIP31.6■■■□□ 2.65
PKP3-205ENST00000527442 NALCNQ8IZF0 1738 aa31.6■■■□□ 2.65
PKP3-205ENST00000527442 NUTM2BA6NNL0 878 aaPredicted RBP31.59■■■□□ 2.65
PKP3-205ENST00000527442 NUTM2EB1AL46 878 aaPredicted RBP31.59■■■□□ 2.65
PKP3-205ENST00000527442 NUTM2AQ8IVF1 878 aaPredicted RBP31.59■■■□□ 2.65
PKP3-205ENST00000527442 SETD5Q9C0A6 1442 aa31.58■■■□□ 2.65
PKP3-205ENST00000527442 ITGAEP38570 1179 aa31.57■■■□□ 2.64
PKP3-205ENST00000527442 METP08581 1390 aa31.56■■■□□ 2.64
PKP3-205ENST00000527442 CLTCL1P53675 1640 aa31.55■■■□□ 2.64
PKP3-205ENST00000527442 CDK12Q9NYV4 1490 aaPredicted RBP31.54■■■□□ 2.64
PKP3-205ENST00000527442 NEXMIFQ5QGS0 1516 aa31.54■■■□□ 2.64
PKP3-205ENST00000527442 ADGRL3Q9HAR2 1447 aa31.53■■■□□ 2.64
PKP3-205ENST00000527442 RXRBP28702 533 aa31.53■■■□□ 2.64
PKP3-205ENST00000527442 AFF2P51816 1311 aa31.52■■■□□ 2.64
PKP3-205ENST00000527442 ZNF326Q5BKZ1 582 aaKnown RBP31.51■■■□□ 2.63
PKP3-205ENST00000527442 KIF1BO60333 1816 aa31.48■■■□□ 2.63
PKP3-205ENST00000527442 DDX17Q92841 729 aaKnown RBP31.47■■■□□ 2.63
PKP3-205ENST00000527442 PNPLA6Q8IY17 1366 aa31.46■■■□□ 2.63
PKP3-205ENST00000527442 LRRC59Q96AG4 307 aaKnown RBP31.44■■■□□ 2.62
PKP3-205ENST00000527442 LAMC1P11047 1609 aa31.42■■■□□ 2.62
PKP3-205ENST00000527442 RGS12O14924 1447 aa31.42■■■□□ 2.62
PKP3-205ENST00000527442 C8orf37Q96NL8 207 aa31.4■■■□□ 2.62
PKP3-205ENST00000527442 C1orf167Q5SNV9 1468 aa31.39■■■□□ 2.62
PKP3-205ENST00000527442 PTCH1Q13635 1447 aa31.35■■■□□ 2.61
PKP3-205ENST00000527442 QTRT2Q9H974 415 aaKnown RBP31.33■■■□□ 2.61
PKP3-205ENST00000527442 RBM6P78332 1123 aaKnown RBP31.32■■■□□ 2.6
PKP3-205ENST00000527442 ROBO2Q9HCK4 1378 aa31.31■■■□□ 2.6
PKP3-205ENST00000527442 PCGF6Q9BYE7 350 aa31.31■■■□□ 2.6
PKP3-205ENST00000527442 PPLO60437 1756 aa31.28■■■□□ 2.6
PKP3-205ENST00000527442 ADAMTS2O95450 1211 aa31.28■■■□□ 2.6
PKP3-205ENST00000527442 NAIPQ13075 1403 aa31.28■■■□□ 2.6
PKP3-205ENST00000527442 PRAG1Q86YV5 1406 aa31.28■■■□□ 2.6
PKP3-205ENST00000527442 ORAI2Q96SN7 254 aa31.26■■■□□ 2.59
PKP3-205ENST00000527442 SOS2Q07890 1332 aaPredicted RBP31.25■■■□□ 2.59
PKP3-205ENST00000527442 COL22A1Q8NFW1 1626 aaPredicted RBP31.25■■■□□ 2.59
PKP3-205ENST00000527442 NGLY1Q96IV0 654 aa31.25■■■□□ 2.59
PKP3-205ENST00000527442 VGFO15240 615 aaPredicted RBP31.21■■■□□ 2.59
PKP3-205ENST00000527442 CDC42BPGQ6DT37 1551 aa31.18■■■□□ 2.58
PKP3-205ENST00000527442 HFM1A2PYH4 1435 aa31.18■■■□□ 2.58
PKP3-205ENST00000527442 MARF1Q9Y4F3 1742 aaKnown RBP31.18■■■□□ 2.58
Retrieved 100 of 20,778 RNA–protein pairs in 9.2 ms