RNA–Protein interactions for RNA: ENST00000526942.5

RPUSD4-203, Transcript of RNA pseudouridylate synthase domain containing 4, humanhuman

TSL 5

Gene RPUSD4, Length 1,791 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD4-203ENST00000526942 JCADQ9P266 1359 aa18.12■□□□□ 0.49
RPUSD4-203ENST00000526942 SLC52A1Q9NWF4 448 aa18.12■□□□□ 0.49
RPUSD4-203ENST00000526942 CHIC2Q9UKJ5 165 aa18.12■□□□□ 0.49
RPUSD4-203ENST00000526942 SLAIN2Q9P270 581 aa18.11■□□□□ 0.49
RPUSD4-203ENST00000526942 BCANQ96GW7 911 aa18.1■□□□□ 0.49
RPUSD4-203ENST00000526942 ZFYVE9O95405 1425 aa18.1■□□□□ 0.49
RPUSD4-203ENST00000526942 PLEKHG1Q9ULL1 1385 aa18.09■□□□□ 0.49
RPUSD4-203ENST00000526942 COL16A1Q07092 1604 aaPredicted RBP18.09■□□□□ 0.49
RPUSD4-203ENST00000526942 CHD2O14647 1828 aaKnown RBP18.08■□□□□ 0.48
RPUSD4-203ENST00000526942 RPRD2Q5VT52 1461 aaKnown RBP18.07■□□□□ 0.48
RPUSD4-203ENST00000526942 ADGRL2O95490 1459 aa18.06■□□□□ 0.48
RPUSD4-203ENST00000526942 RIMS2Q9UQ26 1411 aa18.06■□□□□ 0.48
RPUSD4-203ENST00000526942 HRCP23327 699 aa18.05■□□□□ 0.48
RPUSD4-203ENST00000526942 GCC2Q8IWJ2 1684 aa18.05■□□□□ 0.48
RPUSD4-203ENST00000526942 LRP6O75581 1613 aa18.05■□□□□ 0.48
RPUSD4-203ENST00000526942 MYO5BQ9ULV0 1848 aa18.05■□□□□ 0.48
RPUSD4-203ENST00000526942 NCOA3Q9Y6Q9 1424 aa18.04■□□□□ 0.48
RPUSD4-203ENST00000526942 PPP1R15AO75807 674 aaPredicted RBP18.04■□□□□ 0.48
RPUSD4-203ENST00000526942 APLP2Q06481 763 aa18.04■□□□□ 0.48
RPUSD4-203ENST00000526942 TMEM131LA2VDJ0 1609 aa18.03■□□□□ 0.48
RPUSD4-203ENST00000526942 SPATA31A6Q5VVP1 1343 aa18.02■□□□□ 0.48
RPUSD4-203ENST00000526942 TBX22Q9Y458 520 aa18.02■□□□□ 0.47
RPUSD4-203ENST00000526942 ANKRD50Q9ULJ7 1429 aa18.01■□□□□ 0.47
RPUSD4-203ENST00000526942 HDGFP51858 240 aaKnown RBP18.01■□□□□ 0.47
RPUSD4-203ENST00000526942 AHDC1Q5TGY3 1603 aaPredicted RBP18.01■□□□□ 0.47
RPUSD4-203ENST00000526942 ADAMTS13Q76LX8 1427 aa17.99■□□□□ 0.47
RPUSD4-203ENST00000526942 C14orf37Q86TY3 774 aa17.99■□□□□ 0.47
RPUSD4-203ENST00000526942 DIP2AQ14689 1571 aa17.99■□□□□ 0.47
RPUSD4-203ENST00000526942 SHPRHQ149N8 1683 aa17.98■□□□□ 0.47
RPUSD4-203ENST00000526942 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.98■□□□□ 0.47
RPUSD4-203ENST00000526942 MEX3CQ5U5Q3 659 aaKnown RBP17.98■□□□□ 0.47
RPUSD4-203ENST00000526942 ZNF772Q68DY9 489 aaPredicted RBP17.98■□□□□ 0.47
RPUSD4-203ENST00000526942 CADPS2Q86UW7 1296 aa17.97■□□□□ 0.47
RPUSD4-203ENST00000526942 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.97■□□□□ 0.47
RPUSD4-203ENST00000526942 UPF1Q92900 1129 aaKnown RBP eCLIP17.96■□□□□ 0.472e-8■■■■■ 31.4
RPUSD4-203ENST00000526942 PIK3R4Q99570 1358 aa17.96■□□□□ 0.47
RPUSD4-203ENST00000526942 TRIM52Q96A61 297 aa17.95■□□□□ 0.46
RPUSD4-203ENST00000526942 C19orf44Q9H6X5 657 aa17.95■□□□□ 0.46
RPUSD4-203ENST00000526942 UNC13BO14795 1591 aa17.94■□□□□ 0.46
RPUSD4-203ENST00000526942 CHGAP10645 457 aaKnown RBP17.94■□□□□ 0.46
RPUSD4-203ENST00000526942 ATF3P18847 181 aa17.94■□□□□ 0.46
RPUSD4-203ENST00000526942 FAM50AQ14320 339 aaKnown RBP17.94■□□□□ 0.46
RPUSD4-203ENST00000526942 NUTM2DQ5VT03 806 aaPredicted RBP17.94■□□□□ 0.46
RPUSD4-203ENST00000526942 TRPM2O94759 1503 aa17.92■□□□□ 0.46
RPUSD4-203ENST00000526942 E9PCH4 1651 aa17.92■□□□□ 0.46
RPUSD4-203ENST00000526942 BRINP3Q76B58 766 aa17.91■□□□□ 0.46
RPUSD4-203ENST00000526942 PTPRUQ92729 1446 aa17.91■□□□□ 0.46
RPUSD4-203ENST00000526942 CDK12Q9NYV4 1490 aaPredicted RBP17.89■□□□□ 0.46
RPUSD4-203ENST00000526942 RXRBP28702 533 aa17.89■□□□□ 0.45
RPUSD4-203ENST00000526942 DCCP43146 1447 aa17.89■□□□□ 0.45
RPUSD4-203ENST00000526942 AMOTL2Q9Y2J4 779 aa17.89■□□□□ 0.45
RPUSD4-203ENST00000526942 ASXL1Q8IXJ9 1541 aa17.87■□□□□ 0.45
RPUSD4-203ENST00000526942 IQGAP3Q86VI3 1631 aa17.87■□□□□ 0.45
RPUSD4-203ENST00000526942 NUTM2BA6NNL0 878 aaPredicted RBP17.87■□□□□ 0.45
RPUSD4-203ENST00000526942 NUTM2EB1AL46 878 aaPredicted RBP17.87■□□□□ 0.45
RPUSD4-203ENST00000526942 NUTM2AQ8IVF1 878 aaPredicted RBP17.87■□□□□ 0.45
RPUSD4-203ENST00000526942 SETD5Q9C0A6 1442 aa17.86■□□□□ 0.45
RPUSD4-203ENST00000526942 XRN1Q8IZH2 1706 aaKnown RBP17.86■□□□□ 0.45
RPUSD4-203ENST00000526942 AFF2P51816 1311 aa17.85■□□□□ 0.45
RPUSD4-203ENST00000526942 NHSL1Q5SYE7 1610 aa17.85■□□□□ 0.45
RPUSD4-203ENST00000526942 MST1RQ04912 1400 aa17.84■□□□□ 0.45
RPUSD4-203ENST00000526942 NRXN3Q9Y4C0 1643 aa17.84■□□□□ 0.45
RPUSD4-203ENST00000526942 PCGF6Q9BYE7 350 aa17.83■□□□□ 0.44
RPUSD4-203ENST00000526942 SETBP1Q9Y6X0 1596 aa17.82■□□□□ 0.44
RPUSD4-203ENST00000526942 ROCK1Q13464 1354 aa17.82■□□□□ 0.44
RPUSD4-203ENST00000526942 RGS12O14924 1447 aa17.8■□□□□ 0.44
RPUSD4-203ENST00000526942 NUP155O75694 1391 aa17.8■□□□□ 0.44
RPUSD4-203ENST00000526942 LRRC59Q96AG4 307 aaKnown RBP17.79■□□□□ 0.44
RPUSD4-203ENST00000526942 PNPLA6Q8IY17 1366 aa17.78■□□□□ 0.44
RPUSD4-203ENST00000526942 C8orf37Q96NL8 207 aa17.78■□□□□ 0.44
RPUSD4-203ENST00000526942 METP08581 1390 aa17.78■□□□□ 0.44
RPUSD4-203ENST00000526942 ADGRL3Q9HAR2 1447 aa17.78■□□□□ 0.44
RPUSD4-203ENST00000526942 RBM6P78332 1123 aaKnown RBP17.76■□□□□ 0.43
RPUSD4-203ENST00000526942 DDX17Q92841 729 aaKnown RBP17.76■□□□□ 0.43
RPUSD4-203ENST00000526942 QTRT2Q9H974 415 aaKnown RBP17.76■□□□□ 0.43
RPUSD4-203ENST00000526942 SPHKAPQ2M3C7 1700 aa17.75■□□□□ 0.43
RPUSD4-203ENST00000526942 NALCNQ8IZF0 1738 aa17.75■□□□□ 0.43
RPUSD4-203ENST00000526942 ZNF326Q5BKZ1 582 aaKnown RBP17.74■□□□□ 0.43
RPUSD4-203ENST00000526942 NEXMIFQ5QGS0 1516 aa17.71■□□□□ 0.43
RPUSD4-203ENST00000526942 C1orf167Q5SNV9 1468 aa17.71■□□□□ 0.43
RPUSD4-203ENST00000526942 LAMC1P11047 1609 aa17.7■□□□□ 0.42
RPUSD4-203ENST00000526942 SRCAPQ6ZRS2 3230 aa17.7■□□□□ 0.42
RPUSD4-203ENST00000526942 ADAMTS2O95450 1211 aa17.69■□□□□ 0.42
RPUSD4-203ENST00000526942 TRIM26Q12899 539 aaPredicted RBP17.69■□□□□ 0.42
RPUSD4-203ENST00000526942 NGLY1Q96IV0 654 aa17.69■□□□□ 0.42
RPUSD4-203ENST00000526942 CLTCL1P53675 1640 aa17.68■□□□□ 0.42
RPUSD4-203ENST00000526942 ATAD2Q6PL18 1390 aa17.67■□□□□ 0.42
RPUSD4-203ENST00000526942 ITGAEP38570 1179 aa17.67■□□□□ 0.42
RPUSD4-203ENST00000526942 PTCH1Q13635 1447 aa17.67■□□□□ 0.42
RPUSD4-203ENST00000526942 SOS2Q07890 1332 aaPredicted RBP17.65■□□□□ 0.42
RPUSD4-203ENST00000526942 USP21Q9UK80 565 aa17.64■□□□□ 0.41
RPUSD4-203ENST00000526942 ORAI2Q96SN7 254 aa17.63■□□□□ 0.41
RPUSD4-203ENST00000526942 ROBO2Q9HCK4 1378 aa17.63■□□□□ 0.41
RPUSD4-203ENST00000526942 TRPC5Q9UL62 973 aaPredicted RBP17.63■□□□□ 0.41
RPUSD4-203ENST00000526942 COL22A1Q8NFW1 1626 aaPredicted RBP17.62■□□□□ 0.41
RPUSD4-203ENST00000526942 ATRNO75882 1429 aa17.62■□□□□ 0.41
RPUSD4-203ENST00000526942 PRAG1Q86YV5 1406 aa17.62■□□□□ 0.41
RPUSD4-203ENST00000526942 FNBP4Q8N3X1 1017 aaPredicted RBP17.61■□□□□ 0.41
RPUSD4-203ENST00000526942 KIF1BO60333 1816 aa17.6■□□□□ 0.41
RPUSD4-203ENST00000526942 MYOM2P54296 1465 aa17.58■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms