RNA–Protein interactions for RNA: ENST00000525076.5

CTSB-208, Transcript of cathepsin B, humanhuman

TSL 5

Gene CTSB, Length 550 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-208ENST00000525076 NKTRP30414 1462 aaKnown RBP23.41■■□□□ 1.34
CTSB-208ENST00000525076 GCC2Q8IWJ2 1684 aa23.41■■□□□ 1.34
CTSB-208ENST00000525076 PPP1R15AO75807 674 aaPredicted RBP23.4■■□□□ 1.34
CTSB-208ENST00000525076 NWD1Q149M9 1564 aa23.39■■□□□ 1.33
CTSB-208ENST00000525076 MYO5BQ9ULV0 1848 aa23.38■■□□□ 1.33
CTSB-208ENST00000525076 RBM33Q96EV2 1170 aaKnown RBP23.38■■□□□ 1.33
CTSB-208ENST00000525076 UNC13BO14795 1591 aa23.38■■□□□ 1.33
CTSB-208ENST00000525076 ZFYVE9O95405 1425 aa23.37■■□□□ 1.33
CTSB-208ENST00000525076 RIMS2Q9UQ26 1411 aa23.37■■□□□ 1.33
CTSB-208ENST00000525076 PLEKHG1Q9ULL1 1385 aa23.37■■□□□ 1.33
CTSB-208ENST00000525076 MSH6P52701 1360 aa23.36■■□□□ 1.33
CTSB-208ENST00000525076 TMEM131LA2VDJ0 1609 aa23.35■■□□□ 1.33
CTSB-208ENST00000525076 CHGAP10645 457 aaKnown RBP23.35■■□□□ 1.33
CTSB-208ENST00000525076 ROCK1Q13464 1354 aa23.35■■□□□ 1.33
CTSB-208ENST00000525076 ROBO1Q9Y6N7 1651 aa23.35■■□□□ 1.33
CTSB-208ENST00000525076 ABCF1Q8NE71 845 aaKnown RBP eCLIP23.33■■□□□ 1.33
CTSB-208ENST00000525076 CHD2O14647 1828 aaKnown RBP23.32■■□□□ 1.32
CTSB-208ENST00000525076 E9PCH4 1651 aa23.32■■□□□ 1.32
CTSB-208ENST00000525076 IQGAP3Q86VI3 1631 aa23.3■■□□□ 1.32
CTSB-208ENST00000525076 TBX22Q9Y458 520 aa23.29■■□□□ 1.32
CTSB-208ENST00000525076 SLAIN2Q9P270 581 aa23.28■■□□□ 1.32
CTSB-208ENST00000525076 NUP155O75694 1391 aa23.27■■□□□ 1.32
CTSB-208ENST00000525076 RGS17Q9UGC6 210 aaPredicted RBP23.27■■□□□ 1.32
CTSB-208ENST00000525076 ITGAEP38570 1179 aa23.26■■□□□ 1.31
CTSB-208ENST00000525076 NUTM2DQ5VT03 806 aaPredicted RBP23.25■■□□□ 1.31
CTSB-208ENST00000525076 C14orf37Q86TY3 774 aa23.24■■□□□ 1.31
CTSB-208ENST00000525076 NCOA3Q9Y6Q9 1424 aa23.24■■□□□ 1.31
CTSB-208ENST00000525076 DIP2AQ14689 1571 aa23.23■■□□□ 1.31
CTSB-208ENST00000525076 PHLPP1O60346 1717 aa23.22■■□□□ 1.31
CTSB-208ENST00000525076 ADAMTS13Q76LX8 1427 aa23.22■■□□□ 1.31
CTSB-208ENST00000525076 PIK3R4Q99570 1358 aa23.21■■□□□ 1.31
CTSB-208ENST00000525076 JCADQ9P266 1359 aa23.17■■□□□ 1.3
CTSB-208ENST00000525076 CADPS2Q86UW7 1296 aa23.17■■□□□ 1.3
CTSB-208ENST00000525076 PPARGC1BQ86YN6 1023 aaKnown RBP23.17■■□□□ 1.3
CTSB-208ENST00000525076 TRPM2O94759 1503 aa23.17■■□□□ 1.3
CTSB-208ENST00000525076 ATF3P18847 181 aa23.16■■□□□ 1.3
CTSB-208ENST00000525076 C19orf44Q9H6X5 657 aa23.16■■□□□ 1.3
CTSB-208ENST00000525076 SIPA1L2Q9P2F8 1722 aaPredicted RBP23.14■■□□□ 1.3
CTSB-208ENST00000525076 POTEAQ6S8J7 498 aa23.14■■□□□ 1.29
CTSB-208ENST00000525076 AMOTL2Q9Y2J4 779 aa23.14■■□□□ 1.29
CTSB-208ENST00000525076 SPHKAPQ2M3C7 1700 aa23.13■■□□□ 1.29
CTSB-208ENST00000525076 ZNF326Q5BKZ1 582 aaKnown RBP23.12■■□□□ 1.29
CTSB-208ENST00000525076 COL16A1Q07092 1604 aaPredicted RBP23.11■■□□□ 1.29
CTSB-208ENST00000525076 PTPRUQ92729 1446 aa23.08■■□□□ 1.29
CTSB-208ENST00000525076 SPATA31A6Q5VVP1 1343 aa23.08■■□□□ 1.28
CTSB-208ENST00000525076 SETBP1Q9Y6X0 1596 aa23.07■■□□□ 1.28
CTSB-208ENST00000525076 AHDC1Q5TGY3 1603 aaPredicted RBP23.07■■□□□ 1.28
CTSB-208ENST00000525076 NRXN3Q9Y4C0 1643 aa23.06■■□□□ 1.28
CTSB-208ENST00000525076 DCCP43146 1447 aa23.05■■□□□ 1.28
CTSB-208ENST00000525076 MEX3CQ5U5Q3 659 aaKnown RBP23.04■■□□□ 1.28
CTSB-208ENST00000525076 XRN1Q8IZH2 1706 aaKnown RBP23.03■■□□□ 1.28
CTSB-208ENST00000525076 BRINP3Q76B58 766 aa23.02■■□□□ 1.28
CTSB-208ENST00000525076 SHPRHQ149N8 1683 aa23.01■■□□□ 1.27
CTSB-208ENST00000525076 CLTCL1P53675 1640 aa23■■□□□ 1.27
CTSB-208ENST00000525076 RRBP1Q9P2E9 1410 aaKnown RBP23■■□□□ 1.27
CTSB-208ENST00000525076 KIF1BO60333 1816 aa23■■□□□ 1.27
CTSB-208ENST00000525076 LRP6O75581 1613 aa23■■□□□ 1.27
CTSB-208ENST00000525076 METP08581 1390 aa23■■□□□ 1.27
CTSB-208ENST00000525076 ZNF772Q68DY9 489 aaPredicted RBP22.99■■□□□ 1.27
CTSB-208ENST00000525076 NEXMIFQ5QGS0 1516 aa22.98■■□□□ 1.27
CTSB-208ENST00000525076 NAIPQ13075 1403 aa22.98■■□□□ 1.27
CTSB-208ENST00000525076 ASXL1Q8IXJ9 1541 aa22.96■■□□□ 1.27
CTSB-208ENST00000525076 SETD1AO15047 1707 aaKnown RBP22.95■■□□□ 1.26
CTSB-208ENST00000525076 MST1RQ04912 1400 aa22.95■■□□□ 1.26
CTSB-208ENST00000525076 TRIM52Q96A61 297 aa22.94■■□□□ 1.26
CTSB-208ENST00000525076 ADGRL3Q9HAR2 1447 aa22.93■■□□□ 1.26
CTSB-208ENST00000525076 NUTM2BA6NNL0 878 aaPredicted RBP22.92■■□□□ 1.26
CTSB-208ENST00000525076 NUTM2EB1AL46 878 aaPredicted RBP22.92■■□□□ 1.26
CTSB-208ENST00000525076 VGFO15240 615 aaPredicted RBP22.92■■□□□ 1.26
CTSB-208ENST00000525076 NUTM2AQ8IVF1 878 aaPredicted RBP22.92■■□□□ 1.26
CTSB-208ENST00000525076 NHSL1Q5SYE7 1610 aa22.91■■□□□ 1.26
CTSB-208ENST00000525076 SETD5Q9C0A6 1442 aa22.91■■□□□ 1.26
CTSB-208ENST00000525076 LRRC59Q96AG4 307 aaKnown RBP22.9■■□□□ 1.26
CTSB-208ENST00000525076 NALCNQ8IZF0 1738 aa22.89■■□□□ 1.26
CTSB-208ENST00000525076 HFM1A2PYH4 1435 aa22.89■■□□□ 1.25
CTSB-208ENST00000525076 SLC4A1APQ9BWU0 796 aaKnown RBP22.88■■□□□ 1.25
CTSB-208ENST00000525076 RPGRIP1LQ68CZ1 1315 aa22.87■■□□□ 1.25
CTSB-208ENST00000525076 PTCH1Q13635 1447 aa22.86■■□□□ 1.25
CTSB-208ENST00000525076 RXRBP28702 533 aa22.86■■□□□ 1.25
CTSB-208ENST00000525076 DDX17Q92841 729 aaKnown RBP22.83■■□□□ 1.25
CTSB-208ENST00000525076 AFF2P51816 1311 aa22.82■■□□□ 1.24
CTSB-208ENST00000525076 C1orf167Q5SNV9 1468 aa22.82■■□□□ 1.24
CTSB-208ENST00000525076 ROBO2Q9HCK4 1378 aa22.81■■□□□ 1.24
CTSB-208ENST00000525076 PNPLA6Q8IY17 1366 aa22.8■■□□□ 1.24
CTSB-208ENST00000525076 PPLO60437 1756 aa22.8■■□□□ 1.24
CTSB-208ENST00000525076 C8orf37Q96NL8 207 aa22.79■■□□□ 1.24
CTSB-208ENST00000525076 CDK12Q9NYV4 1490 aaPredicted RBP22.78■■□□□ 1.24
CTSB-208ENST00000525076 PRAG1Q86YV5 1406 aa22.77■■□□□ 1.24
CTSB-208ENST00000525076 UPF1Q92900 1129 aaKnown RBP eCLIP22.77■■□□□ 1.24
CTSB-208ENST00000525076 ORAI2Q96SN7 254 aa22.76■■□□□ 1.23
CTSB-208ENST00000525076 LAMC1P11047 1609 aa22.75■■□□□ 1.23
CTSB-208ENST00000525076 FOXD1Q16676 465 aa22.74■■□□□ 1.23
CTSB-208ENST00000525076 CCDC144AA2RUR9 1427 aa22.74■■□□□ 1.23
CTSB-208ENST00000525076 QTRT2Q9H974 415 aaKnown RBP22.73■■□□□ 1.23
CTSB-208ENST00000525076 SOS2Q07890 1332 aaPredicted RBP22.73■■□□□ 1.23
CTSB-208ENST00000525076 ADAMTS2O95450 1211 aa22.72■■□□□ 1.23
CTSB-208ENST00000525076 NGLY1Q96IV0 654 aa22.72■■□□□ 1.23
CTSB-208ENST00000525076 RBM6P78332 1123 aaKnown RBP22.71■■□□□ 1.23
CTSB-208ENST00000525076 RGL3Q3MIN7 710 aa22.69■■□□□ 1.22
CTSB-208ENST00000525076 ADGRF5Q8IZF2 1346 aa22.68■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms