RNA–Protein interactions for RNA: ENST00000524238.3

HMBOX1-211, Transcript of homeobox containing 1, humanhuman

TSL 2 BASIC

Gene HMBOX1, Length 1,731 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMBOX1-211ENST00000524238 PANK3Q9H999 370 aa9.64□□□□□ -0.87
HMBOX1-211ENST00000524238 PRG4Q92954 1404 aaPredicted RBP9.64□□□□□ -0.87
HMBOX1-211ENST00000524238 FAM135AQ9P2D6 1515 aa9.63□□□□□ -0.87
HMBOX1-211ENST00000524238 SYNMO15061 1565 aa9.63□□□□□ -0.87
HMBOX1-211ENST00000524238 PTMSP20962 102 aa9.63□□□□□ -0.87
HMBOX1-211ENST00000524238 ADAMTS8Q9UP79 889 aa9.63□□□□□ -0.87
HMBOX1-211ENST00000524238 KNSTRNQ9Y448 316 aa9.63□□□□□ -0.87
HMBOX1-211ENST00000524238 RNF17Q9BXT8 1623 aaKnown RBP9.63□□□□□ -0.87
HMBOX1-211ENST00000524238 MRE11P49959 708 aa9.62□□□□□ -0.87
HMBOX1-211ENST00000524238 HSP90AA2PQ14568 343 aaPredicted RBP9.62□□□□□ -0.87
HMBOX1-211ENST00000524238 TESK2Q96S53 571 aa9.62□□□□□ -0.87
HMBOX1-211ENST00000524238 POGKQ9P215 609 aa9.62□□□□□ -0.87
HMBOX1-211ENST00000524238 SYNJ2O15056 1496 aa9.62□□□□□ -0.87
HMBOX1-211ENST00000524238 STAC3Q96MF2 364 aa9.62□□□□□ -0.87
HMBOX1-211ENST00000524238 NAP1L5Q96NT1 182 aaPredicted RBP9.62□□□□□ -0.87
HMBOX1-211ENST00000524238 RRAGDQ9NQL2 400 aaPredicted RBP9.62□□□□□ -0.87
HMBOX1-211ENST00000524238 ZNF777Q9ULD5 760 aaPredicted RBP9.62□□□□□ -0.87
HMBOX1-211ENST00000524238 PLEKHH1Q9ULM0 1364 aa9.62□□□□□ -0.87
HMBOX1-211ENST00000524238 MYO5CQ9NQX4 1742 aa9.62□□□□□ -0.87
HMBOX1-211ENST00000524238 UNC13BO14795 1591 aa9.61□□□□□ -0.87
HMBOX1-211ENST00000524238 DISP3Q9P2K9 1392 aa9.61□□□□□ -0.87
HMBOX1-211ENST00000524238 USP19O94966 1318 aa9.61□□□□□ -0.87
HMBOX1-211ENST00000524238 FSD2A1L4K1 749 aa9.61□□□□□ -0.87
HMBOX1-211ENST00000524238 SKAP1Q86WV1 359 aa9.61□□□□□ -0.87
HMBOX1-211ENST00000524238 ASXL1Q8IXJ9 1541 aa9.6□□□□□ -0.87
HMBOX1-211ENST00000524238 ARID3CA6NKF2 412 aa9.6□□□□□ -0.87
HMBOX1-211ENST00000524238 DDX11L8A8MPP1 907 aa9.6□□□□□ -0.87
HMBOX1-211ENST00000524238 PPP2R1AP30153 589 aa9.6□□□□□ -0.87
HMBOX1-211ENST00000524238 CLUAP1Q96AJ1 413 aa9.6□□□□□ -0.87
HMBOX1-211ENST00000524238 ANTXR1Q9H6X2 564 aa9.6□□□□□ -0.87
HMBOX1-211ENST00000524238 ATP10AO60312 1499 aa9.6□□□□□ -0.87
HMBOX1-211ENST00000524238 A2MP01023 1474 aa9.6□□□□□ -0.87
HMBOX1-211ENST00000524238 CARMIL2Q6F5E8 1435 aa9.6□□□□□ -0.87
HMBOX1-211ENST00000524238 CHMP5Q9NZZ3 219 aa9.59□□□□□ -0.87
HMBOX1-211ENST00000524238 NLRP1Q9C000 1473 aa9.59□□□□□ -0.87
HMBOX1-211ENST00000524238 SCAPERQ9BY12 1400 aa9.59□□□□□ -0.87
HMBOX1-211ENST00000524238 TPM2P07951 284 aa9.59□□□□□ -0.87
HMBOX1-211ENST00000524238 MCM4P33991 863 aa9.59□□□□□ -0.87
HMBOX1-211ENST00000524238 TBC1D32Q96NH3 1257 aa9.59□□□□□ -0.87
HMBOX1-211ENST00000524238 MAST1Q9Y2H9 1570 aa9.58□□□□□ -0.88
HMBOX1-211ENST00000524238 PLEKHD1A6NEE1 506 aa9.58□□□□□ -0.88
HMBOX1-211ENST00000524238 XRCC6P12956 609 aaKnown RBP eCLIP9.58□□□□□ -0.88
HMBOX1-211ENST00000524238 CANXP27824 592 aaKnown RBP9.58□□□□□ -0.88
HMBOX1-211ENST00000524238 SLKQ9H2G2 1235 aaPredicted RBP9.58□□□□□ -0.88
HMBOX1-211ENST00000524238 IFT140Q96RY7 1462 aa9.58□□□□□ -0.88
HMBOX1-211ENST00000524238 WDR7Q9Y4E6 1490 aa9.58□□□□□ -0.88
HMBOX1-211ENST00000524238 IQGAP3Q86VI3 1631 aa9.57□□□□□ -0.88
HMBOX1-211ENST00000524238 MYH16Q9H6N6 1097 aa9.57□□□□□ -0.88
HMBOX1-211ENST00000524238 MAGI1Q96QZ7 1491 aaPredicted RBP9.57□□□□□ -0.88
HMBOX1-211ENST00000524238 CENPJQ9HC77 1338 aaPredicted RBP9.57□□□□□ -0.88
HMBOX1-211ENST00000524238 IQGAP1P46940 1657 aa9.56□□□□□ -0.88
HMBOX1-211ENST00000524238 GRIN2AQ12879 1464 aa9.56□□□□□ -0.88
HMBOX1-211ENST00000524238 SKOR2Q2VWA4 1001 aaPredicted RBP9.56□□□□□ -0.88
HMBOX1-211ENST00000524238 TRIM44Q96DX7 344 aaPredicted RBP9.56□□□□□ -0.88
HMBOX1-211ENST00000524238 RWDD1Q9H446 243 aaPredicted RBP9.56□□□□□ -0.88
HMBOX1-211ENST00000524238 NBPF1Q3BBV0 1214 aa9.55□□□□□ -0.88
HMBOX1-211ENST00000524238 AMER1Q5JTC6 1135 aaPredicted RBP9.55□□□□□ -0.88
HMBOX1-211ENST00000524238 TBC1D2Q9BYX2 928 aa9.55□□□□□ -0.88
HMBOX1-211ENST00000524238 MAGI2Q86UL8 1455 aa9.55□□□□□ -0.88
HMBOX1-211ENST00000524238 TRAK2O60296 914 aa9.54□□□□□ -0.88
HMBOX1-211ENST00000524238 IGHDP01880 384 aa9.54□□□□□ -0.88
HMBOX1-211ENST00000524238 NCBP3Q53F19 620 aaKnown RBP9.54□□□□□ -0.88
HMBOX1-211ENST00000524238 VSIG10Q8N0Z9 540 aa9.54□□□□□ -0.88
HMBOX1-211ENST00000524238 MRC2Q9UBG0 1479 aa9.54□□□□□ -0.88
HMBOX1-211ENST00000524238 ESPNB1AK53 854 aa9.53□□□□□ -0.88
HMBOX1-211ENST00000524238 CIZ1Q9ULV3 898 aaPredicted RBP9.53□□□□□ -0.88
HMBOX1-211ENST00000524238 PLB1Q6P1J6 1458 aa9.53□□□□□ -0.88
HMBOX1-211ENST00000524238 ABCA8O94911 1581 aa9.53□□□□□ -0.88
HMBOX1-211ENST00000524238 KDM5AP29375 1690 aaKnown RBP9.53□□□□□ -0.88
HMBOX1-211ENST00000524238 PREX2Q70Z35 1606 aa9.53□□□□□ -0.88
HMBOX1-211ENST00000524238 HSCBQ8IWL3 235 aa9.53□□□□□ -0.88
HMBOX1-211ENST00000524238 GRPEL1Q9HAV7 217 aa9.53□□□□□ -0.88
HMBOX1-211ENST00000524238 SCAF11Q99590 1463 aaKnown RBP9.53□□□□□ -0.88
HMBOX1-211ENST00000524238 BCAR3O75815 825 aa9.52□□□□□ -0.89
HMBOX1-211ENST00000524238 TERF1P54274 439 aa9.52□□□□□ -0.89
HMBOX1-211ENST00000524238 GBP4Q96PP9 640 aa9.52□□□□□ -0.89
HMBOX1-211ENST00000524238 ZMYND15Q9H091 742 aa9.52□□□□□ -0.89
HMBOX1-211ENST00000524238 PDCL3Q9H2J4 239 aa9.52□□□□□ -0.89
HMBOX1-211ENST00000524238 KIAA1210Q9ULL0 1709 aa9.52□□□□□ -0.89
HMBOX1-211ENST00000524238 DUOX2Q9NRD8 1548 aa9.52□□□□□ -0.89
HMBOX1-211ENST00000524238 PLA2R1Q13018 1463 aa9.51□□□□□ -0.89
HMBOX1-211ENST00000524238 APAF1O14727 1248 aa9.51□□□□□ -0.89
HMBOX1-211ENST00000524238 SEC24BO95487 1268 aa9.51□□□□□ -0.89
HMBOX1-211ENST00000524238 RGL3Q3MIN7 710 aa9.51□□□□□ -0.89
HMBOX1-211ENST00000524238 ANP32BQ92688 251 aaKnown RBP9.51□□□□□ -0.89
HMBOX1-211ENST00000524238 MADDQ8WXG6 1647 aa9.51□□□□□ -0.89
HMBOX1-211ENST00000524238 TTC37Q6PGP7 1564 aa9.51□□□□□ -0.89
HMBOX1-211ENST00000524238 MAP7D2Q96T17 732 aa9.51□□□□□ -0.89
HMBOX1-211ENST00000524238 C22orf23Q9BZE7 217 aa9.51□□□□□ -0.89
HMBOX1-211ENST00000524238 MYOM1P52179 1685 aa9.5□□□□□ -0.89
HMBOX1-211ENST00000524238 SPHKAPQ2M3C7 1700 aa9.5□□□□□ -0.89
HMBOX1-211ENST00000524238 POLR3AO14802 1390 aaPredicted RBP9.5□□□□□ -0.89
HMBOX1-211ENST00000524238 CT47B1P0C2W7 299 aaPredicted RBP9.5□□□□□ -0.89
HMBOX1-211ENST00000524238 COG6Q9Y2V7 657 aa9.5□□□□□ -0.89
HMBOX1-211ENST00000524238 SAMD9LQ8IVG5 1584 aa9.5□□□□□ -0.89
HMBOX1-211ENST00000524238 KANK1Q14678 1352 aa9.49□□□□□ -0.89
HMBOX1-211ENST00000524238 CCDC173Q0VFZ6 552 aa9.49□□□□□ -0.89
HMBOX1-211ENST00000524238 WDR63Q8IWG1 891 aa9.49□□□□□ -0.89
HMBOX1-211ENST00000524238 PDZRN3Q9UPQ7 1066 aa9.49□□□□□ -0.89
HMBOX1-211ENST00000524238 NCOA3Q9Y6Q9 1424 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms