RNA–Protein interactions for RNA: ENST00000524084.5

CCDC25-211, Transcript of coiled-coil domain containing 25, humanhuman

TSL 3

Gene CCDC25, Length 460 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC25-211ENST00000524084 BCANQ96GW7 911 aa20.12■□□□□ 0.81
CCDC25-211ENST00000524084 ROCK1Q13464 1354 aa20.09■□□□□ 0.81
CCDC25-211ENST00000524084 PLEKHG1Q9ULL1 1385 aa20.09■□□□□ 0.81
CCDC25-211ENST00000524084 NWD1Q149M9 1564 aa20.09■□□□□ 0.81
CCDC25-211ENST00000524084 PPP1R15AO75807 674 aaPredicted RBP20.09■□□□□ 0.81
CCDC25-211ENST00000524084 ZFYVE9O95405 1425 aa20.09■□□□□ 0.81
CCDC25-211ENST00000524084 UNC13BO14795 1591 aa20.08■□□□□ 0.8
CCDC25-211ENST00000524084 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.07■□□□□ 0.8
CCDC25-211ENST00000524084 RIMS2Q9UQ26 1411 aa20.07■□□□□ 0.8
CCDC25-211ENST00000524084 MSH6P52701 1360 aa20.07■□□□□ 0.8
CCDC25-211ENST00000524084 GCC2Q8IWJ2 1684 aa20.07■□□□□ 0.8
CCDC25-211ENST00000524084 TMEM131LA2VDJ0 1609 aa20.05■□□□□ 0.8
CCDC25-211ENST00000524084 TBX22Q9Y458 520 aa20.03■□□□□ 0.8
CCDC25-211ENST00000524084 ROBO1Q9Y6N7 1651 aa20.02■□□□□ 0.8
CCDC25-211ENST00000524084 NCOA3Q9Y6Q9 1424 aa20.02■□□□□ 0.79
CCDC25-211ENST00000524084 CHGAP10645 457 aaKnown RBP20.01■□□□□ 0.79
CCDC25-211ENST00000524084 RBM33Q96EV2 1170 aaKnown RBP20.01■□□□□ 0.79
CCDC25-211ENST00000524084 SLAIN2Q9P270 581 aa20.01■□□□□ 0.79
CCDC25-211ENST00000524084 IQGAP3Q86VI3 1631 aa20■□□□□ 0.79
CCDC25-211ENST00000524084 E9PCH4 1651 aa19.99■□□□□ 0.79
CCDC25-211ENST00000524084 NUP155O75694 1391 aa19.98■□□□□ 0.79
CCDC25-211ENST00000524084 PIK3R4Q99570 1358 aa19.98■□□□□ 0.79
CCDC25-211ENST00000524084 CHD2O14647 1828 aaKnown RBP19.98■□□□□ 0.79
CCDC25-211ENST00000524084 MYO5BQ9ULV0 1848 aa19.98■□□□□ 0.79
CCDC25-211ENST00000524084 DIP2AQ14689 1571 aa19.98■□□□□ 0.79
CCDC25-211ENST00000524084 RGS17Q9UGC6 210 aaPredicted RBP19.97■□□□□ 0.79
CCDC25-211ENST00000524084 C14orf37Q86TY3 774 aa19.94■□□□□ 0.78
CCDC25-211ENST00000524084 ADAMTS13Q76LX8 1427 aa19.93■□□□□ 0.78
CCDC25-211ENST00000524084 JCADQ9P266 1359 aa19.93■□□□□ 0.78
CCDC25-211ENST00000524084 ITGAEP38570 1179 aa19.92■□□□□ 0.78
CCDC25-211ENST00000524084 CADPS2Q86UW7 1296 aa19.92■□□□□ 0.78
CCDC25-211ENST00000524084 NUTM2DQ5VT03 806 aaPredicted RBP19.91■□□□□ 0.78
CCDC25-211ENST00000524084 C19orf44Q9H6X5 657 aa19.91■□□□□ 0.78
CCDC25-211ENST00000524084 TRPM2O94759 1503 aa19.91■□□□□ 0.78
CCDC25-211ENST00000524084 PHLPP1O60346 1717 aa19.9■□□□□ 0.78
CCDC25-211ENST00000524084 ATF3P18847 181 aa19.89■□□□□ 0.77
CCDC25-211ENST00000524084 POTEAQ6S8J7 498 aa19.86■□□□□ 0.77
CCDC25-211ENST00000524084 AMOTL2Q9Y2J4 779 aa19.86■□□□□ 0.77
CCDC25-211ENST00000524084 COL16A1Q07092 1604 aaPredicted RBP19.84■□□□□ 0.77
CCDC25-211ENST00000524084 SPATA31A6Q5VVP1 1343 aa19.84■□□□□ 0.77
CCDC25-211ENST00000524084 SIPA1L2Q9P2F8 1722 aaPredicted RBP19.84■□□□□ 0.77
CCDC25-211ENST00000524084 DCCP43146 1447 aa19.84■□□□□ 0.77
CCDC25-211ENST00000524084 SETBP1Q9Y6X0 1596 aa19.83■□□□□ 0.77
CCDC25-211ENST00000524084 ZNF326Q5BKZ1 582 aaKnown RBP19.83■□□□□ 0.77
CCDC25-211ENST00000524084 SPHKAPQ2M3C7 1700 aa19.82■□□□□ 0.76
CCDC25-211ENST00000524084 AHDC1Q5TGY3 1603 aaPredicted RBP19.82■□□□□ 0.76
CCDC25-211ENST00000524084 PPARGC1BQ86YN6 1023 aaKnown RBP19.81■□□□□ 0.76
CCDC25-211ENST00000524084 PTPRUQ92729 1446 aa19.81■□□□□ 0.76
CCDC25-211ENST00000524084 MEX3CQ5U5Q3 659 aaKnown RBP19.78■□□□□ 0.76
CCDC25-211ENST00000524084 RRBP1Q9P2E9 1410 aaKnown RBP19.77■□□□□ 0.76
CCDC25-211ENST00000524084 NRXN3Q9Y4C0 1643 aa19.77■□□□□ 0.76
CCDC25-211ENST00000524084 XRN1Q8IZH2 1706 aaKnown RBP19.77■□□□□ 0.76
CCDC25-211ENST00000524084 BRINP3Q76B58 766 aa19.77■□□□□ 0.76
CCDC25-211ENST00000524084 ZNF772Q68DY9 489 aaPredicted RBP19.76■□□□□ 0.75
CCDC25-211ENST00000524084 NAIPQ13075 1403 aa19.75■□□□□ 0.75
CCDC25-211ENST00000524084 SHPRHQ149N8 1683 aa19.75■□□□□ 0.75
CCDC25-211ENST00000524084 METP08581 1390 aa19.74■□□□□ 0.75
CCDC25-211ENST00000524084 LRP6O75581 1613 aa19.73■□□□□ 0.75
CCDC25-211ENST00000524084 CLTCL1P53675 1640 aa19.73■□□□□ 0.75
CCDC25-211ENST00000524084 NEXMIFQ5QGS0 1516 aa19.72■□□□□ 0.75
CCDC25-211ENST00000524084 ASXL1Q8IXJ9 1541 aa19.72■□□□□ 0.75
CCDC25-211ENST00000524084 MST1RQ04912 1400 aa19.71■□□□□ 0.75
CCDC25-211ENST00000524084 ADGRL3Q9HAR2 1447 aa19.71■□□□□ 0.75
CCDC25-211ENST00000524084 VGFO15240 615 aaPredicted RBP19.7■□□□□ 0.74
CCDC25-211ENST00000524084 SETD5Q9C0A6 1442 aa19.69■□□□□ 0.74
CCDC25-211ENST00000524084 HFM1A2PYH4 1435 aa19.68■□□□□ 0.74
CCDC25-211ENST00000524084 KIF1BO60333 1816 aa19.68■□□□□ 0.74
CCDC25-211ENST00000524084 TRIM52Q96A61 297 aa19.68■□□□□ 0.74
CCDC25-211ENST00000524084 LRRC59Q96AG4 307 aaKnown RBP19.68■□□□□ 0.74
CCDC25-211ENST00000524084 RPGRIP1LQ68CZ1 1315 aa19.67■□□□□ 0.74
CCDC25-211ENST00000524084 PTCH1Q13635 1447 aa19.66■□□□□ 0.74
CCDC25-211ENST00000524084 NUTM2BA6NNL0 878 aaPredicted RBP19.65■□□□□ 0.74
CCDC25-211ENST00000524084 NUTM2EB1AL46 878 aaPredicted RBP19.65■□□□□ 0.74
CCDC25-211ENST00000524084 NUTM2AQ8IVF1 878 aaPredicted RBP19.65■□□□□ 0.74
CCDC25-211ENST00000524084 NHSL1Q5SYE7 1610 aa19.65■□□□□ 0.74
CCDC25-211ENST00000524084 SLC4A1APQ9BWU0 796 aaKnown RBP19.64■□□□□ 0.73
CCDC25-211ENST00000524084 RXRBP28702 533 aa19.63■□□□□ 0.73
CCDC25-211ENST00000524084 SETD1AO15047 1707 aaKnown RBP19.62■□□□□ 0.73
CCDC25-211ENST00000524084 NALCNQ8IZF0 1738 aa19.62■□□□□ 0.73
CCDC25-211ENST00000524084 PRAG1Q86YV5 1406 aa19.62■□□□□ 0.73
CCDC25-211ENST00000524084 C1orf167Q5SNV9 1468 aa19.6■□□□□ 0.73
CCDC25-211ENST00000524084 CDK12Q9NYV4 1490 aaPredicted RBP19.6■□□□□ 0.73
CCDC25-211ENST00000524084 AFF2P51816 1311 aa19.6■□□□□ 0.73
CCDC25-211ENST00000524084 PNPLA6Q8IY17 1366 aa19.58■□□□□ 0.73
CCDC25-211ENST00000524084 ROBO2Q9HCK4 1378 aa19.58■□□□□ 0.73
CCDC25-211ENST00000524084 DDX17Q92841 729 aaKnown RBP19.56■□□□□ 0.72
CCDC25-211ENST00000524084 LAMC1P11047 1609 aa19.55■□□□□ 0.72
CCDC25-211ENST00000524084 UPF1Q92900 1129 aaKnown RBP eCLIP19.55■□□□□ 0.72
CCDC25-211ENST00000524084 C8orf37Q96NL8 207 aa19.55■□□□□ 0.72
CCDC25-211ENST00000524084 SOS2Q07890 1332 aaPredicted RBP19.53■□□□□ 0.72
CCDC25-211ENST00000524084 CCDC144AA2RUR9 1427 aa19.53■□□□□ 0.72
CCDC25-211ENST00000524084 PPLO60437 1756 aa19.53■□□□□ 0.72
CCDC25-211ENST00000524084 RBM6P78332 1123 aaKnown RBP19.52■□□□□ 0.72
CCDC25-211ENST00000524084 ORAI2Q96SN7 254 aa19.52■□□□□ 0.72
CCDC25-211ENST00000524084 NGLY1Q96IV0 654 aa19.51■□□□□ 0.71
CCDC25-211ENST00000524084 QTRT2Q9H974 415 aaKnown RBP19.51■□□□□ 0.71
CCDC25-211ENST00000524084 ANKRD30BQ9BXX2 1392 aa19.5■□□□□ 0.71
CCDC25-211ENST00000524084 ACIN1Q9UKV3 1341 aaKnown RBP19.5■□□□□ 0.71
CCDC25-211ENST00000524084 NPHP3Q7Z494 1330 aa19.49■□□□□ 0.71
CCDC25-211ENST00000524084 CDC42BPGQ6DT37 1551 aa19.49■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms