RNA–Protein interactions for RNA: ENST00000522573.5

CSGALNACT1-209, Transcript of chondroitin sulfate N-acetylgalactosaminyltransferase 1, humanhuman

TSL 5

Gene CSGALNACT1, Length 405 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSGALNACT1-209ENST00000522573 ANKRD50Q9ULJ7 1429 aa12.91□□□□□ -0.34
CSGALNACT1-209ENST00000522573 PHLPP1O60346 1717 aa12.9□□□□□ -0.34
CSGALNACT1-209ENST00000522573 DIP2AQ14689 1571 aa12.9□□□□□ -0.35
CSGALNACT1-209ENST00000522573 IDI1Q13907 227 aa12.89□□□□□ -0.35
CSGALNACT1-209ENST00000522573 CHIC2Q9UKJ5 165 aa12.89□□□□□ -0.35
CSGALNACT1-209ENST00000522573 HDGFP51858 240 aaKnown RBP12.88□□□□□ -0.35
CSGALNACT1-209ENST00000522573 SETD1AO15047 1707 aaKnown RBP12.88□□□□□ -0.35
CSGALNACT1-209ENST00000522573 FAM135BQ49AJ0 1406 aa12.88□□□□□ -0.35
CSGALNACT1-209ENST00000522573 ROCK1Q13464 1354 aa12.87□□□□□ -0.35
CSGALNACT1-209ENST00000522573 KCNA6P17658 529 aa12.87□□□□□ -0.35
CSGALNACT1-209ENST00000522573 ZFYVE9O95405 1425 aa12.86□□□□□ -0.35
CSGALNACT1-209ENST00000522573 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.85□□□□□ -0.35
CSGALNACT1-209ENST00000522573 FAM50AQ14320 339 aaKnown RBP12.84□□□□□ -0.35
CSGALNACT1-209ENST00000522573 NCOA3Q9Y6Q9 1424 aa12.84□□□□□ -0.35
CSGALNACT1-209ENST00000522573 PLEKHG1Q9ULL1 1385 aa12.83□□□□□ -0.36
CSGALNACT1-209ENST00000522573 PHF23Q9BUL5 403 aaPredicted RBP12.83□□□□□ -0.36
CSGALNACT1-209ENST00000522573 TMEM94Q12767 1356 aa12.81□□□□□ -0.36
CSGALNACT1-209ENST00000522573 RIMS2Q9UQ26 1411 aa12.81□□□□□ -0.36
CSGALNACT1-209ENST00000522573 SHPRHQ149N8 1683 aa12.81□□□□□ -0.36
CSGALNACT1-209ENST00000522573 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.81□□□□□ -0.36
CSGALNACT1-209ENST00000522573 TRPM2O94759 1503 aa12.81□□□□□ -0.36
CSGALNACT1-209ENST00000522573 MSH6P52701 1360 aa12.81□□□□□ -0.36
CSGALNACT1-209ENST00000522573 PIK3R4Q99570 1358 aa12.81□□□□□ -0.36
CSGALNACT1-209ENST00000522573 PROSER2Q86WR7 435 aaPredicted RBP12.8□□□□□ -0.36
CSGALNACT1-209ENST00000522573 SLC26A8Q96RN1 970 aa12.79□□□□□ -0.36
CSGALNACT1-209ENST00000522573 XRN1Q8IZH2 1706 aaKnown RBP12.79□□□□□ -0.36
CSGALNACT1-209ENST00000522573 COL16A1Q07092 1604 aaPredicted RBP12.78□□□□□ -0.36
CSGALNACT1-209ENST00000522573 NRXN3Q9Y4C0 1643 aa12.78□□□□□ -0.36
CSGALNACT1-209ENST00000522573 TBX22Q9Y458 520 aa12.78□□□□□ -0.36
CSGALNACT1-209ENST00000522573 SETBP1Q9Y6X0 1596 aa12.77□□□□□ -0.37
CSGALNACT1-209ENST00000522573 PPP1R15AO75807 674 aaPredicted RBP12.76□□□□□ -0.37
CSGALNACT1-209ENST00000522573 BCANQ96GW7 911 aa12.76□□□□□ -0.37
CSGALNACT1-209ENST00000522573 AHDC1Q5TGY3 1603 aaPredicted RBP12.76□□□□□ -0.37
CSGALNACT1-209ENST00000522573 PPLO60437 1756 aa12.75□□□□□ -0.37
CSGALNACT1-209ENST00000522573 NHSL1Q5SYE7 1610 aa12.75□□□□□ -0.37
CSGALNACT1-209ENST00000522573 RRBP1Q9P2E9 1410 aaKnown RBP12.75□□□□□ -0.37
CSGALNACT1-209ENST00000522573 ADAMTS13Q76LX8 1427 aa12.74□□□□□ -0.37
CSGALNACT1-209ENST00000522573 NUP155O75694 1391 aa12.73□□□□□ -0.37
CSGALNACT1-209ENST00000522573 SLAIN2Q9P270 581 aa12.73□□□□□ -0.37
CSGALNACT1-209ENST00000522573 CLTCL1P53675 1640 aa12.73□□□□□ -0.37
CSGALNACT1-209ENST00000522573 NALCNQ8IZF0 1738 aa12.72□□□□□ -0.37
CSGALNACT1-209ENST00000522573 DCCP43146 1447 aa12.71□□□□□ -0.37
CSGALNACT1-209ENST00000522573 ITGAEP38570 1179 aa12.71□□□□□ -0.37
CSGALNACT1-209ENST00000522573 JCADQ9P266 1359 aa12.7□□□□□ -0.38
CSGALNACT1-209ENST00000522573 CADPS2Q86UW7 1296 aa12.7□□□□□ -0.38
CSGALNACT1-209ENST00000522573 LAMC1P11047 1609 aa12.7□□□□□ -0.38
CSGALNACT1-209ENST00000522573 NEXMIFQ5QGS0 1516 aa12.69□□□□□ -0.38
CSGALNACT1-209ENST00000522573 CHGAP10645 457 aaKnown RBP12.69□□□□□ -0.38
CSGALNACT1-209ENST00000522573 SENP3Q9H4L4 574 aaPredicted RBP12.69□□□□□ -0.38
CSGALNACT1-209ENST00000522573 C19orf44Q9H6X5 657 aa12.69□□□□□ -0.38
CSGALNACT1-209ENST00000522573 RGS17Q9UGC6 210 aaPredicted RBP12.69□□□□□ -0.38
CSGALNACT1-209ENST00000522573 IFT172Q9UG01 1749 aa12.68□□□□□ -0.38
CSGALNACT1-209ENST00000522573 MARF1Q9Y4F3 1742 aaKnown RBP12.68□□□□□ -0.38
CSGALNACT1-209ENST00000522573 SPATA31A6Q5VVP1 1343 aa12.66□□□□□ -0.38
CSGALNACT1-209ENST00000522573 ATF3P18847 181 aa12.66□□□□□ -0.38
CSGALNACT1-209ENST00000522573 RBM33Q96EV2 1170 aaKnown RBP12.66□□□□□ -0.38
CSGALNACT1-209ENST00000522573 C14orf37Q86TY3 774 aa12.65□□□□□ -0.38
CSGALNACT1-209ENST00000522573 PTPRUQ92729 1446 aa12.64□□□□□ -0.39
CSGALNACT1-209ENST00000522573 AMOTL2Q9Y2J4 779 aa12.64□□□□□ -0.39
CSGALNACT1-209ENST00000522573 ASXL1Q8IXJ9 1541 aa12.63□□□□□ -0.39
CSGALNACT1-209ENST00000522573 NAIPQ13075 1403 aa12.62□□□□□ -0.39
CSGALNACT1-209ENST00000522573 KNDC1Q76NI1 1749 aa12.62□□□□□ -0.39
CSGALNACT1-209ENST00000522573 ZNF326Q5BKZ1 582 aaKnown RBP12.61□□□□□ -0.39
CSGALNACT1-209ENST00000522573 NUTM2DQ5VT03 806 aaPredicted RBP12.61□□□□□ -0.39
CSGALNACT1-209ENST00000522573 POTEAQ6S8J7 498 aa12.61□□□□□ -0.39
CSGALNACT1-209ENST00000522573 PRAG1Q86YV5 1406 aa12.61□□□□□ -0.39
CSGALNACT1-209ENST00000522573 ADGRL3Q9HAR2 1447 aa12.61□□□□□ -0.39
CSGALNACT1-209ENST00000522573 HFM1A2PYH4 1435 aa12.6□□□□□ -0.39
CSGALNACT1-209ENST00000522573 MST1RQ04912 1400 aa12.6□□□□□ -0.39
CSGALNACT1-209ENST00000522573 SETD5Q9C0A6 1442 aa12.6□□□□□ -0.39
CSGALNACT1-209ENST00000522573 LRP6O75581 1613 aa12.59□□□□□ -0.39
CSGALNACT1-209ENST00000522573 ZNF772Q68DY9 489 aaPredicted RBP12.59□□□□□ -0.39
CSGALNACT1-209ENST00000522573 PTCH1Q13635 1447 aa12.59□□□□□ -0.39
CSGALNACT1-209ENST00000522573 RPGRIP1LQ68CZ1 1315 aa12.59□□□□□ -0.39
CSGALNACT1-209ENST00000522573 COL22A1Q8NFW1 1626 aaPredicted RBP12.59□□□□□ -0.39
CSGALNACT1-209ENST00000522573 RGPD8O14715 1765 aaPredicted RBP12.58□□□□□ -0.39
CSGALNACT1-209ENST00000522573 VGFO15240 615 aaPredicted RBP12.58□□□□□ -0.4
CSGALNACT1-209ENST00000522573 CDK12Q9NYV4 1490 aaPredicted RBP12.58□□□□□ -0.4
CSGALNACT1-209ENST00000522573 METP08581 1390 aa12.57□□□□□ -0.4
CSGALNACT1-209ENST00000522573 BRINP3Q76B58 766 aa12.57□□□□□ -0.4
CSGALNACT1-209ENST00000522573 MEX3CQ5U5Q3 659 aaKnown RBP12.55□□□□□ -0.4
CSGALNACT1-209ENST00000522573 LRRC59Q96AG4 307 aaKnown RBP12.55□□□□□ -0.4
CSGALNACT1-209ENST00000522573 ACIN1Q9UKV3 1341 aaKnown RBP12.55□□□□□ -0.4
CSGALNACT1-209ENST00000522573 CDC42BPGQ6DT37 1551 aa12.55□□□□□ -0.4
CSGALNACT1-209ENST00000522573 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.54□□□□□ -0.4
CSGALNACT1-209ENST00000522573 KIF1AQ12756 1690 aa12.54□□□□□ -0.4
CSGALNACT1-209ENST00000522573 FMN2Q9NZ56 1722 aa12.53□□□□□ -0.4
CSGALNACT1-209ENST00000522573 C1orf167Q5SNV9 1468 aa12.52□□□□□ -0.41
CSGALNACT1-209ENST00000522573 TRIM52Q96A61 297 aa12.5□□□□□ -0.41
CSGALNACT1-209ENST00000522573 SLC4A1APQ9BWU0 796 aaKnown RBP12.5□□□□□ -0.41
CSGALNACT1-209ENST00000522573 PNPLA6Q8IY17 1366 aa12.49□□□□□ -0.41
CSGALNACT1-209ENST00000522573 RXRBP28702 533 aa12.49□□□□□ -0.41
CSGALNACT1-209ENST00000522573 CCDC144AA2RUR9 1427 aa12.48□□□□□ -0.41
CSGALNACT1-209ENST00000522573 TECPR2O15040 1411 aa12.47□□□□□ -0.41
CSGALNACT1-209ENST00000522573 ANKRD30BQ9BXX2 1392 aa12.47□□□□□ -0.41
CSGALNACT1-209ENST00000522573 ROBO2Q9HCK4 1378 aa12.46□□□□□ -0.41
CSGALNACT1-209ENST00000522573 NWD2Q9ULI1 1742 aa12.46□□□□□ -0.41
CSGALNACT1-209ENST00000522573 AFF2P51816 1311 aa12.46□□□□□ -0.41
CSGALNACT1-209ENST00000522573 SOS2Q07890 1332 aaPredicted RBP12.46□□□□□ -0.41
CSGALNACT1-209ENST00000522573 BRWD3Q6RI45 1802 aa12.46□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms