RNA–Protein interactions for RNA: ENST00000522146.1

MTCL1-212, Transcript of microtubule crosslinking factor 1, humanhuman

TSL 4

Gene MTCL1, Length 580 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTCL1-212ENST00000522146 HOXB1P14653 301 aaPredicted RBP10.21□□□□□ -0.77
MTCL1-212ENST00000522146 MS4A4AQ96JQ5 239 aa10.21□□□□□ -0.77
MTCL1-212ENST00000522146 ESF1Q9H501 851 aaKnown RBP10.21□□□□□ -0.77
MTCL1-212ENST00000522146 ATP1B4Q9UN42 357 aaPredicted RBP10.21□□□□□ -0.77
MTCL1-212ENST00000522146 CDK11AQ9UQ88 783 aaPredicted RBP10.21□□□□□ -0.77
MTCL1-212ENST00000522146 CDK13Q14004 1512 aaKnown RBP10.21□□□□□ -0.78
MTCL1-212ENST00000522146 UBAP1LF5GYI3 381 aa10.2□□□□□ -0.78
MTCL1-212ENST00000522146 ZNF518AQ6AHZ1 1483 aa10.19□□□□□ -0.78
MTCL1-212ENST00000522146 NCOA1Q15788 1441 aa10.19□□□□□ -0.78
MTCL1-212ENST00000522146 NCKAP5LQ9HCH0 1330 aa10.19□□□□□ -0.78
MTCL1-212ENST00000522146 TMEM92Q6UXU6 159 aa10.19□□□□□ -0.78
MTCL1-212ENST00000522146 PHF8Q9UPP1 1060 aa10.18□□□□□ -0.78
MTCL1-212ENST00000522146 MLH3Q9UHC1 1453 aa10.17□□□□□ -0.78
MTCL1-212ENST00000522146 ZNF335Q9H4Z2 1342 aaPredicted RBP10.17□□□□□ -0.78
MTCL1-212ENST00000522146 C3P01024 1663 aa10.17□□□□□ -0.78
MTCL1-212ENST00000522146 ZMYM3Q14202 1370 aa10.16□□□□□ -0.78
MTCL1-212ENST00000522146 KDM5CP41229 1560 aa10.16□□□□□ -0.78
MTCL1-212ENST00000522146 AGLP35573 1532 aa10.16□□□□□ -0.78
MTCL1-212ENST00000522146 REREQ9P2R6 1566 aa10.15□□□□□ -0.78
MTCL1-212ENST00000522146 RIMBP2O15034 1052 aa10.15□□□□□ -0.78
MTCL1-212ENST00000522146 PKD2Q13563 968 aa10.15□□□□□ -0.78
MTCL1-212ENST00000522146 EEA1Q15075 1411 aa10.15□□□□□ -0.79
MTCL1-212ENST00000522146 DIP2CQ9Y2E4 1556 aa10.14□□□□□ -0.79
MTCL1-212ENST00000522146 TROQ12816 1431 aaPredicted RBP10.14□□□□□ -0.79
MTCL1-212ENST00000522146 CNTLNQ9NXG0 1405 aa10.14□□□□□ -0.79
MTCL1-212ENST00000522146 MYO5CQ9NQX4 1742 aa10.13□□□□□ -0.79
MTCL1-212ENST00000522146 ERBB3P21860 1342 aa10.13□□□□□ -0.79
MTCL1-212ENST00000522146 HSPA1LP34931 641 aa10.13□□□□□ -0.79
MTCL1-212ENST00000522146 NPATQ14207 1427 aa10.13□□□□□ -0.79
MTCL1-212ENST00000522146 ARHGAP5Q13017 1502 aa10.12□□□□□ -0.79
MTCL1-212ENST00000522146 CAMSAP1Q5T5Y3 1602 aa10.12□□□□□ -0.79
MTCL1-212ENST00000522146 FMN1Q68DA7 1419 aa10.12□□□□□ -0.79
MTCL1-212ENST00000522146 KIF14Q15058 1648 aa10.11□□□□□ -0.79
MTCL1-212ENST00000522146 UBTFP17480 764 aaKnown RBP10.11□□□□□ -0.79
MTCL1-212ENST00000522146 BCL11BQ9C0K0 894 aaPredicted RBP10.11□□□□□ -0.79
MTCL1-212ENST00000522146 ZSWIM6Q9HCJ5 1215 aa10.11□□□□□ -0.79
MTCL1-212ENST00000522146 ABCA6Q8N139 1617 aa10.11□□□□□ -0.79
MTCL1-212ENST00000522146 NLRP6P59044 892 aa10.1□□□□□ -0.79
MTCL1-212ENST00000522146 TAOK2Q9UL54 1235 aa10.1□□□□□ -0.79
MTCL1-212ENST00000522146 CDC42BPBQ9Y5S2 1711 aa10.1□□□□□ -0.79
MTCL1-212ENST00000522146 TOM1O60784 492 aa10.09□□□□□ -0.79
MTCL1-212ENST00000522146 HNRNPMP52272 730 aaKnown RBP eCLIP10.09□□□□□ -0.79
MTCL1-212ENST00000522146 FBXO22Q8NEZ5 403 aa10.09□□□□□ -0.79
MTCL1-212ENST00000522146 KIDINS220Q9ULH0 1771 aa10.09□□□□□ -0.79
MTCL1-212ENST00000522146 CLIP1P30622 1438 aa10.08□□□□□ -0.8
MTCL1-212ENST00000522146 PIP4K2BP78356 416 aa10.08□□□□□ -0.8
MTCL1-212ENST00000522146 VARS2Q5ST30 1063 aaKnown RBP10.08□□□□□ -0.8
MTCL1-212ENST00000522146 ARHGAP35Q9NRY4 1499 aa10.08□□□□□ -0.8
MTCL1-212ENST00000522146 PLA2R1Q13018 1463 aa10.07□□□□□ -0.8
MTCL1-212ENST00000522146 TCOF1Q13428 1488 aaKnown RBP10.07□□□□□ -0.8
MTCL1-212ENST00000522146 GPR153Q6NV75 609 aa10.07□□□□□ -0.8
MTCL1-212ENST00000522146 GGT6Q6P531 493 aa10.07□□□□□ -0.8
MTCL1-212ENST00000522146 STK24Q9Y6E0 443 aa10.07□□□□□ -0.8
MTCL1-212ENST00000522146 PTPRKQ15262 1439 aa10.07□□□□□ -0.8
MTCL1-212ENST00000522146 SPAG9O60271 1321 aaKnown RBP10.07□□□□□ -0.8
MTCL1-212ENST00000522146 ZNF777Q9ULD5 760 aaPredicted RBP10.06□□□□□ -0.8
MTCL1-212ENST00000522146 ABCC1P33527 1531 aa10.04□□□□□ -0.8
MTCL1-212ENST00000522146 MROH2AA6NES4 1674 aa10.04□□□□□ -0.8
MTCL1-212ENST00000522146 MFRPQ9BY79 579 aa10.04□□□□□ -0.8
MTCL1-212ENST00000522146 STK25O00506 426 aa10.03□□□□□ -0.8
MTCL1-212ENST00000522146 LRRIQ1Q96JM4 1722 aa10.02□□□□□ -0.8
MTCL1-212ENST00000522146 MED1Q15648 1581 aaPredicted RBP10.02□□□□□ -0.81
MTCL1-212ENST00000522146 SAMD9LQ8IVG5 1584 aa10.02□□□□□ -0.81
MTCL1-212ENST00000522146 ECM2O94769 699 aaPredicted RBP10.02□□□□□ -0.81
MTCL1-212ENST00000522146 ITSN2Q9NZM3 1697 aa10.02□□□□□ -0.81
MTCL1-212ENST00000522146 ARSIQ5FYB1 569 aa10.01□□□□□ -0.81
MTCL1-212ENST00000522146 FBXO31Q5XUX0 539 aaPredicted RBP10.01□□□□□ -0.81
MTCL1-212ENST00000522146 ZNF687Q8N1G0 1237 aa10.01□□□□□ -0.81
MTCL1-212ENST00000522146 SUPT6HQ7KZ85 1726 aaKnown RBP10.01□□□□□ -0.81
MTCL1-212ENST00000522146 PREX2Q70Z35 1606 aa10□□□□□ -0.81
MTCL1-212ENST00000522146 A2MP01023 1474 aa10□□□□□ -0.81
MTCL1-212ENST00000522146 SHANK2Q9UPX8 1470 aa10□□□□□ -0.81
MTCL1-212ENST00000522146 ANKLE2Q86XL3 938 aa10□□□□□ -0.81
MTCL1-212ENST00000522146 GPATCH8Q9UKJ3 1502 aaKnown RBP10□□□□□ -0.81
MTCL1-212ENST00000522146 CEP170BQ9Y4F5 1589 aaPredicted RBP10□□□□□ -0.81
MTCL1-212ENST00000522146 CLTCQ00610 1675 aaKnown RBP9.99□□□□□ -0.81
MTCL1-212ENST00000522146 KIAA1107Q9UPP5 1409 aa9.99□□□□□ -0.81
MTCL1-212ENST00000522146 A2ML1A8K2U0 1454 aa9.99□□□□□ -0.81
MTCL1-212ENST00000522146 CFDP1Q9UEE9 299 aaPredicted RBP9.99□□□□□ -0.81
MTCL1-212ENST00000522146 RGS17Q9UGC6 210 aaPredicted RBP9.99□□□□□ -0.81
MTCL1-212ENST00000522146 ZNF142P52746 1687 aaPredicted RBP9.99□□□□□ -0.81
MTCL1-212ENST00000522146 CASKIN1Q8WXD9 1431 aa9.99□□□□□ -0.81
MTCL1-212ENST00000522146 CPS1P31327 1500 aa9.98□□□□□ -0.81
MTCL1-212ENST00000522146 DNMT1P26358 1616 aaKnown RBP9.98□□□□□ -0.81
MTCL1-212ENST00000522146 MYO3AQ8NEV4 1616 aa9.98□□□□□ -0.81
MTCL1-212ENST00000522146 THEMISQ8N1K5 641 aaPredicted RBP9.98□□□□□ -0.81
MTCL1-212ENST00000522146 CDC42BPAQ5VT25 1732 aa9.98□□□□□ -0.81
MTCL1-212ENST00000522146 KIF3CO14782 793 aa9.97□□□□□ -0.81
MTCL1-212ENST00000522146 RGL2O15211 777 aa9.96□□□□□ -0.82
MTCL1-212ENST00000522146 KHSRPQ92945 711 aaKnown RBP eCLIP9.96□□□□□ -0.827e-7■■□□□ 11.8
MTCL1-212ENST00000522146 ZNF644Q9H582 1327 aaPredicted RBP9.96□□□□□ -0.82
MTCL1-212ENST00000522146 CCDC18Q5T9S5 1454 aa9.96□□□□□ -0.82
MTCL1-212ENST00000522146 SYCP2Q9BX26 1530 aa9.96□□□□□ -0.82
MTCL1-212ENST00000522146 PLXNC1O60486 1568 aa9.96□□□□□ -0.82
MTCL1-212ENST00000522146 ALKQ9UM73 1620 aa9.96□□□□□ -0.82
MTCL1-212ENST00000522146 C2orf72A6NCS6 295 aa9.95□□□□□ -0.82
MTCL1-212ENST00000522146 KIF3BO15066 747 aa9.95□□□□□ -0.82
MTCL1-212ENST00000522146 RNF166Q96A37 237 aaPredicted RBP9.95□□□□□ -0.82
MTCL1-212ENST00000522146 DHX29Q7Z478 1369 aaKnown RBP9.95□□□□□ -0.82
MTCL1-212ENST00000522146 TNRQ92752 1358 aa9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms