RNA–Protein interactions for RNA: ENST00000522052.5

CTNNA1-233, Transcript of catenin alpha 1, humanhuman

TSL 4

Gene CTNNA1, Length 579 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-233ENST00000522052 TSKSQ9UJT2 592 aa9.18□□□□□ -0.94
CTNNA1-233ENST00000522052 PPP1R3GB7ZBB8 358 aa9.17□□□□□ -0.94
CTNNA1-233ENST00000522052 DNAJB2P25686 324 aa9.16□□□□□ -0.94
CTNNA1-233ENST00000522052 NUDT18Q6ZVK8 323 aa9.16□□□□□ -0.94
CTNNA1-233ENST00000522052 NUTM1Q86Y26 1132 aa9.16□□□□□ -0.94
CTNNA1-233ENST00000522052 ZNF710Q8N1W2 664 aa9.16□□□□□ -0.94
CTNNA1-233ENST00000522052 SERPINA10Q9UK55 444 aa9.16□□□□□ -0.94
CTNNA1-233ENST00000522052 NBPF26B4DH59 902 aa9.15□□□□□ -0.94
CTNNA1-233ENST00000522052 POTEJP0CG39 1038 aa9.15□□□□□ -0.94
CTNNA1-233ENST00000522052 HRCP23327 699 aa9.15□□□□□ -0.94
CTNNA1-233ENST00000522052 PTPREP23469 700 aa9.15□□□□□ -0.94
CTNNA1-233ENST00000522052 GJA5P36382 358 aa9.15□□□□□ -0.94
CTNNA1-233ENST00000522052 RSBN1LQ6PCB5 846 aaPredicted RBP9.15□□□□□ -0.94
CTNNA1-233ENST00000522052 DDX11L8A8MPP1 907 aa9.14□□□□□ -0.95
CTNNA1-233ENST00000522052 PDIA4P13667 645 aaKnown RBP9.14□□□□□ -0.95
CTNNA1-233ENST00000522052 TATDN2Q93075 761 aa9.14□□□□□ -0.95
CTNNA1-233ENST00000522052 CCDC97Q96F63 343 aaPredicted RBP9.14□□□□□ -0.95
CTNNA1-233ENST00000522052 TMEM134Q9H6X4 195 aa9.14□□□□□ -0.95
CTNNA1-233ENST00000522052 MOXD2PA6NHM9 499 aa9.13□□□□□ -0.95
CTNNA1-233ENST00000522052 TRIM6-TRIM34B2RNG4 842 aa9.13□□□□□ -0.95
CTNNA1-233ENST00000522052 C3orf80F5H4A9 247 aa9.13□□□□□ -0.95
CTNNA1-233ENST00000522052 SOCS7O14512 581 aa9.13□□□□□ -0.95
CTNNA1-233ENST00000522052 PACS2Q86VP3 889 aa9.13□□□□□ -0.95
CTNNA1-233ENST00000522052 MTMR14Q8NCE2 650 aa9.13□□□□□ -0.95
CTNNA1-233ENST00000522052 PNMA3Q9UL41 463 aa9.13□□□□□ -0.95
CTNNA1-233ENST00000522052 PLSCR2Q9NRY7 297 aa9.12□□□□□ -0.95
CTNNA1-233ENST00000522052 ZNF330Q9Y3S2 320 aaPredicted RBP9.12□□□□□ -0.95
CTNNA1-233ENST00000522052 LILRB3O75022 631 aa9.11□□□□□ -0.95
CTNNA1-233ENST00000522052 NDUFV2P19404 249 aa9.1□□□□□ -0.95
CTNNA1-233ENST00000522052 CSPP1Q1MSJ5 1256 aa9.1□□□□□ -0.95
CTNNA1-233ENST00000522052 QPCTQ16769 361 aa9.09□□□□□ -0.95
CTNNA1-233ENST00000522052 WWC1Q8IX03 1113 aa9.09□□□□□ -0.95
CTNNA1-233ENST00000522052 GDPD2Q9HCC8 539 aa9.09□□□□□ -0.95
CTNNA1-233ENST00000522052 SCUBE2Q9NQ36 999 aa9.09□□□□□ -0.95
CTNNA1-233ENST00000522052 POTEB2H3BUK9 544 aa9.08□□□□□ -0.96
CTNNA1-233ENST00000522052 PRM3Q9NNZ6 103 aa9.08□□□□□ -0.96
CTNNA1-233ENST00000522052 PCDHB15Q9Y5E8 787 aa9.08□□□□□ -0.96
CTNNA1-233ENST00000522052 RTL5Q5HYW3 569 aaPredicted RBP9.07□□□□□ -0.96
CTNNA1-233ENST00000522052 PRPF38BQ5VTL8 546 aaKnown RBP9.07□□□□□ -0.96
CTNNA1-233ENST00000522052 MAMSTRQ6ZN01 415 aa9.07□□□□□ -0.96
CTNNA1-233ENST00000522052 RDH13Q8NBN7 331 aa9.07□□□□□ -0.96
CTNNA1-233ENST00000522052 KDM4AO75164 1064 aa9.06□□□□□ -0.96
CTNNA1-233ENST00000522052 AP1G2O75843 785 aa9.06□□□□□ -0.96
CTNNA1-233ENST00000522052 USP46P62068 366 aa9.06□□□□□ -0.96
CTNNA1-233ENST00000522052 NUTM2BA6NNL0 878 aaPredicted RBP9.05□□□□□ -0.96
CTNNA1-233ENST00000522052 NUTM2EB1AL46 878 aaPredicted RBP9.05□□□□□ -0.96
CTNNA1-233ENST00000522052 SMAPO00193 183 aa9.05□□□□□ -0.96
CTNNA1-233ENST00000522052 HOXB1P14653 301 aaPredicted RBP9.05□□□□□ -0.96
CTNNA1-233ENST00000522052 PROX2Q3B8N5 592 aa9.05□□□□□ -0.96
CTNNA1-233ENST00000522052 RSPH4AQ5TD94 716 aa9.05□□□□□ -0.96
CTNNA1-233ENST00000522052 NUTM2DQ5VT03 806 aaPredicted RBP9.05□□□□□ -0.96
CTNNA1-233ENST00000522052 NUTM2AQ8IVF1 878 aaPredicted RBP9.05□□□□□ -0.96
CTNNA1-233ENST00000522052 ZBTB7CA1YPR0 619 aa9.04□□□□□ -0.96
CTNNA1-233ENST00000522052 USP17L8P0C7I0 530 aa9.04□□□□□ -0.96
CTNNA1-233ENST00000522052 ABL2P42684 1182 aa9.04□□□□□ -0.96
CTNNA1-233ENST00000522052 GCGRP47871 477 aa9.04□□□□□ -0.96
CTNNA1-233ENST00000522052 CABLES1Q8TDN4 633 aa9.04□□□□□ -0.96
CTNNA1-233ENST00000522052 KCNK17Q96T54 332 aa9.04□□□□□ -0.96
CTNNA1-233ENST00000522052 ZBTB3Q9H5J0 574 aa9.04□□□□□ -0.96
CTNNA1-233ENST00000522052 SNPHO15079 494 aa9.03□□□□□ -0.96
CTNNA1-233ENST00000522052 HOXA2O43364 376 aa9.03□□□□□ -0.96
CTNNA1-233ENST00000522052 KCNH8Q96L42 1107 aa9.03□□□□□ -0.96
CTNNA1-233ENST00000522052 TBC1D2BQ9UPU7 963 aa9.03□□□□□ -0.96
CTNNA1-233ENST00000522052 TRAIPQ9BWF2 469 aa9.02□□□□□ -0.97
CTNNA1-233ENST00000522052 KIAA1468Q9P260 1216 aa9.02□□□□□ -0.97
CTNNA1-233ENST00000522052 FDX1P10109 184 aa9.01□□□□□ -0.97
CTNNA1-233ENST00000522052 NECTIN2Q92692 538 aa9□□□□□ -0.97
CTNNA1-233ENST00000522052 CALR3Q96L12 384 aaKnown RBP9□□□□□ -0.97
CTNNA1-233ENST00000522052 ZBED2Q9BTP6 218 aa9□□□□□ -0.97
CTNNA1-233ENST00000522052 POM121CA8CG34 1229 aa8.99□□□□□ -0.97
CTNNA1-233ENST00000522052 SLC10A3P09131 477 aa8.99□□□□□ -0.97
CTNNA1-233ENST00000522052 GLMNQ92990 594 aa8.99□□□□□ -0.97
CTNNA1-233ENST00000522052 GJD4Q96KN9 370 aaPredicted RBP8.99□□□□□ -0.97
CTNNA1-233ENST00000522052 NDUFB9Q9Y6M9 179 aa8.99□□□□□ -0.97
CTNNA1-233ENST00000522052 SWT1Q5T5J6 900 aaKnown RBP8.98□□□□□ -0.97
CTNNA1-233ENST00000522052 PCDHGC3Q9UN70 934 aa8.98□□□□□ -0.97
CTNNA1-233ENST00000522052 PPP1R15AO75807 674 aaPredicted RBP8.97□□□□□ -0.97
CTNNA1-233ENST00000522052 RABGEF1Q9UJ41 708 aa8.96□□□□□ -0.98
CTNNA1-233ENST00000522052 GUCA2AQ02747 115 aa8.95□□□□□ -0.98
CTNNA1-233ENST00000522052 CTDSPL2Q05D32 466 aa8.95□□□□□ -0.98
CTNNA1-233ENST00000522052 IRF5Q13568 498 aa8.95□□□□□ -0.98
CTNNA1-233ENST00000522052 MTMR2Q13614 643 aa8.95□□□□□ -0.98
CTNNA1-233ENST00000522052 KCTD17Q8N5Z5 321 aa8.95□□□□□ -0.98
CTNNA1-233ENST00000522052 RETREG2Q8NC44 543 aa8.95□□□□□ -0.98
CTNNA1-233ENST00000522052 HLA-CQ95604 372 aa8.95□□□□□ -0.98
CTNNA1-233ENST00000522052 PSEN2P49810 448 aa8.94□□□□□ -0.98
CTNNA1-233ENST00000522052 HDGFP51858 240 aaKnown RBP8.94□□□□□ -0.98
CTNNA1-233ENST00000522052 WASHC4Q2M389 1173 aa8.94□□□□□ -0.98
CTNNA1-233ENST00000522052 HELBQ8NG08 1087 aaPredicted RBP8.94□□□□□ -0.98
CTNNA1-233ENST00000522052 OTUD5Q96G74 571 aa8.94□□□□□ -0.98
CTNNA1-233ENST00000522052 SLC4A5Q9BY07 1137 aa8.94□□□□□ -0.98
CTNNA1-233ENST00000522052 HMX1Q9NP08 348 aaPredicted RBP8.94□□□□□ -0.98
CTNNA1-233ENST00000522052 SLC4A3P48751 1232 aa8.93□□□□□ -0.98
CTNNA1-233ENST00000522052 GRIPAP1Q4V328 841 aa8.93□□□□□ -0.98
CTNNA1-233ENST00000522052 TRIM34Q9BYJ4 488 aa8.93□□□□□ -0.98
CTNNA1-233ENST00000522052 ARHGAP33O14559 1287 aa8.92□□□□□ -0.98
CTNNA1-233ENST00000522052 GPR37L1O60883 481 aa8.92□□□□□ -0.98
CTNNA1-233ENST00000522052 HDGFL1Q5TGJ6 251 aa8.92□□□□□ -0.98
CTNNA1-233ENST00000522052 SEPT9Q9UHD8 586 aaPredicted RBP8.92□□□□□ -0.98
CTNNA1-233ENST00000522052 CCDC9Q9Y3X0 531 aaKnown RBP8.92□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 85.5 ms