RNA–Protein interactions for RNA: ENST00000521232.1

SQLE-205, Transcript of squalene epoxidase, humanhuman

TSL 3

Gene SQLE, Length 711 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-205ENST00000521232 ABCF1Q8NE71 845 aaKnown RBP eCLIP25.69■■□□□ 1.7
SQLE-205ENST00000521232 PLEKHG1Q9ULL1 1385 aa25.69■■□□□ 1.7
SQLE-205ENST00000521232 KCNA6P17658 529 aa25.68■■□□□ 1.7
SQLE-205ENST00000521232 SPHKAPQ2M3C7 1700 aa25.67■■□□□ 1.7
SQLE-205ENST00000521232 BCANQ96GW7 911 aa25.67■■□□□ 1.7
SQLE-205ENST00000521232 PPP1R15AO75807 674 aaPredicted RBP25.66■■□□□ 1.7
SQLE-205ENST00000521232 TRIM52Q96A61 297 aa25.66■■□□□ 1.7
SQLE-205ENST00000521232 PIP4K2BP78356 416 aa25.64■■□□□ 1.7
SQLE-205ENST00000521232 ALKQ9UM73 1620 aa25.63■■□□□ 1.69
SQLE-205ENST00000521232 TBX22Q9Y458 520 aa25.62■■□□□ 1.69
SQLE-205ENST00000521232 XIRP1Q702N8 1843 aaKnown RBP25.61■■□□□ 1.69
SQLE-205ENST00000521232 SCAF1Q9H7N4 1312 aaKnown RBP25.61■■□□□ 1.69
SQLE-205ENST00000521232 NUTM2DQ5VT03 806 aaPredicted RBP25.6■■□□□ 1.69
SQLE-205ENST00000521232 SENP3Q9H4L4 574 aaPredicted RBP25.59■■□□□ 1.69
SQLE-205ENST00000521232 SLC4A1APQ9BWU0 796 aaKnown RBP25.58■■□□□ 1.69
SQLE-205ENST00000521232 TRPM2O94759 1503 aa25.58■■□□□ 1.68
SQLE-205ENST00000521232 PROSER2Q86WR7 435 aaPredicted RBP25.57■■□□□ 1.68
SQLE-205ENST00000521232 TMEM94Q12767 1356 aa25.56■■□□□ 1.68
SQLE-205ENST00000521232 NWD1Q149M9 1564 aa25.56■■□□□ 1.68
SQLE-205ENST00000521232 CHD2O14647 1828 aaKnown RBP25.56■■□□□ 1.68
SQLE-205ENST00000521232 ADAMTS13Q76LX8 1427 aa25.55■■□□□ 1.68
SQLE-205ENST00000521232 HSPA1LP34931 641 aa25.55■■□□□ 1.68
SQLE-205ENST00000521232 CLTCL1P53675 1640 aa25.55■■□□□ 1.68
SQLE-205ENST00000521232 NKTRP30414 1462 aaKnown RBP25.54■■□□□ 1.68
SQLE-205ENST00000521232 ZNF326Q5BKZ1 582 aaKnown RBP25.53■■□□□ 1.68
SQLE-205ENST00000521232 PIK3R4Q99570 1358 aa25.51■■□□□ 1.67
SQLE-205ENST00000521232 DIP2AQ14689 1571 aa25.51■■□□□ 1.67
SQLE-205ENST00000521232 KIF1BO60333 1816 aa25.5■■□□□ 1.67
SQLE-205ENST00000521232 RBM33Q96EV2 1170 aaKnown RBP25.5■■□□□ 1.67
SQLE-205ENST00000521232 ACIN1Q9UKV3 1341 aaKnown RBP25.47■■□□□ 1.67
SQLE-205ENST00000521232 MPHOSPH9Q99550 1183 aa25.47■■□□□ 1.67
SQLE-205ENST00000521232 DISP3Q9P2K9 1392 aa25.46■■□□□ 1.67
SQLE-205ENST00000521232 NEXMIFQ5QGS0 1516 aa25.45■■□□□ 1.66
SQLE-205ENST00000521232 SETBP1Q9Y6X0 1596 aa25.44■■□□□ 1.66
SQLE-205ENST00000521232 FOXD1Q16676 465 aa25.44■■□□□ 1.66
SQLE-205ENST00000521232 SETD5Q9C0A6 1442 aa25.44■■□□□ 1.66
SQLE-205ENST00000521232 NRXN3Q9Y4C0 1643 aa25.43■■□□□ 1.66
SQLE-205ENST00000521232 NCOA3Q9Y6Q9 1424 aa25.43■■□□□ 1.66
SQLE-205ENST00000521232 AMOTL2Q9Y2J4 779 aa25.42■■□□□ 1.66
SQLE-205ENST00000521232 FAM135BQ49AJ0 1406 aa25.42■■□□□ 1.66
SQLE-205ENST00000521232 MSH6P52701 1360 aa25.41■■□□□ 1.66
SQLE-205ENST00000521232 RPGRIP1LQ68CZ1 1315 aa25.4■■□□□ 1.66
SQLE-205ENST00000521232 PTPRUQ92729 1446 aa25.4■■□□□ 1.66
SQLE-205ENST00000521232 VGFO15240 615 aaPredicted RBP25.39■■□□□ 1.66
SQLE-205ENST00000521232 METP08581 1390 aa25.36■■□□□ 1.65
SQLE-205ENST00000521232 SLAIN2Q9P270 581 aa25.35■■□□□ 1.65
SQLE-205ENST00000521232 CCDC144AA2RUR9 1427 aa25.34■■□□□ 1.65
SQLE-205ENST00000521232 C19orf44Q9H6X5 657 aa25.33■■□□□ 1.65
SQLE-205ENST00000521232 RAB3GAP2Q9H2M9 1393 aa25.32■■□□□ 1.64
SQLE-205ENST00000521232 C14orf37Q86TY3 774 aa25.32■■□□□ 1.64
SQLE-205ENST00000521232 XRN1Q8IZH2 1706 aaKnown RBP25.32■■□□□ 1.64
SQLE-205ENST00000521232 PPLO60437 1756 aa25.31■■□□□ 1.64
SQLE-205ENST00000521232 ROBO1Q9Y6N7 1651 aa25.3■■□□□ 1.64
SQLE-205ENST00000521232 ILDR2Q71H61 639 aa25.29■■□□□ 1.64
SQLE-205ENST00000521232 CADPS2Q86UW7 1296 aa25.29■■□□□ 1.64
SQLE-205ENST00000521232 SIPA1L2Q9P2F8 1722 aaPredicted RBP25.29■■□□□ 1.64
SQLE-205ENST00000521232 SPATA31E1Q6ZUB1 1445 aa25.29■■□□□ 1.64
SQLE-205ENST00000521232 ATF3P18847 181 aa25.26■■□□□ 1.63
SQLE-205ENST00000521232 HRCP23327 699 aa25.26■■□□□ 1.63
SQLE-205ENST00000521232 RGL3Q3MIN7 710 aa25.26■■□□□ 1.63
SQLE-205ENST00000521232 MED1Q15648 1581 aaPredicted RBP25.26■■□□□ 1.63
SQLE-205ENST00000521232 SETD1AO15047 1707 aaKnown RBP25.24■■□□□ 1.63
SQLE-205ENST00000521232 ADGRF5Q8IZF2 1346 aa25.22■■□□□ 1.63
SQLE-205ENST00000521232 ANKRD30BQ9BXX2 1392 aa25.21■■□□□ 1.63
SQLE-205ENST00000521232 DCCP43146 1447 aa25.2■■□□□ 1.63
SQLE-205ENST00000521232 IFT172Q9UG01 1749 aa25.19■■□□□ 1.62
SQLE-205ENST00000521232 PTCH1Q13635 1447 aa25.17■■□□□ 1.62
SQLE-205ENST00000521232 PRAG1Q86YV5 1406 aa25.17■■□□□ 1.62
SQLE-205ENST00000521232 ADGRL3Q9HAR2 1447 aa25.15■■□□□ 1.62
SQLE-205ENST00000521232 ROBO2Q9HCK4 1378 aa25.15■■□□□ 1.62
SQLE-205ENST00000521232 PHLPP1O60346 1717 aa25.15■■□□□ 1.62
SQLE-205ENST00000521232 BRINP3Q76B58 766 aa25.12■■□□□ 1.61
SQLE-205ENST00000521232 MST1RQ04912 1400 aa25.12■■□□□ 1.61
SQLE-205ENST00000521232 PHF23Q9BUL5 403 aaPredicted RBP25.11■■□□□ 1.61
SQLE-205ENST00000521232 PIK3C2GO75747 1445 aa25.11■■□□□ 1.61
SQLE-205ENST00000521232 NALCNQ8IZF0 1738 aa25.1■■□□□ 1.61
SQLE-205ENST00000521232 COL16A1Q07092 1604 aaPredicted RBP25.08■■□□□ 1.61
SQLE-205ENST00000521232 AHDC1Q5TGY3 1603 aaPredicted RBP25.08■■□□□ 1.61
SQLE-205ENST00000521232 JCADQ9P266 1359 aa25.08■■□□□ 1.61
SQLE-205ENST00000521232 SOCS7O14512 581 aa25.08■■□□□ 1.61
SQLE-205ENST00000521232 C14orf93Q9H972 538 aaKnown RBP25.06■■□□□ 1.6
SQLE-205ENST00000521232 NRXN1Q9ULB1 1477 aa25.06■■□□□ 1.6
SQLE-205ENST00000521232 LRPPRCP42704 1394 aaKnown RBP25.05■■□□□ 1.6
SQLE-205ENST00000521232 TMEM132EQ6IEE7 984 aa25.05■■□□□ 1.6
SQLE-205ENST00000521232 ABCC11Q96J66 1382 aa25.05■■□□□ 1.6
SQLE-205ENST00000521232 MYOM2P54296 1465 aa25.04■■□□□ 1.6
SQLE-205ENST00000521232 STK26Q9P289 416 aa25.04■■□□□ 1.6
SQLE-205ENST00000521232 TECPR2O15040 1411 aa25.03■■□□□ 1.6
SQLE-205ENST00000521232 ASXL1Q8IXJ9 1541 aa25.03■■□□□ 1.6
SQLE-205ENST00000521232 RGS17Q9UGC6 210 aaPredicted RBP25.02■■□□□ 1.6
SQLE-205ENST00000521232 C1orf167Q5SNV9 1468 aa25.01■■□□□ 1.59
SQLE-205ENST00000521232 CFAP70Q5T0N1 1121 aa25■■□□□ 1.59
SQLE-205ENST00000521232 WAPLQ7Z5K2 1190 aa25■■□□□ 1.59
SQLE-205ENST00000521232 SIRT1Q96EB6 747 aa24.99■■□□□ 1.59
SQLE-205ENST00000521232 YTHDC2Q9H6S0 1430 aaKnown RBP24.99■■□□□ 1.59
SQLE-205ENST00000521232 KNDC1Q76NI1 1749 aa24.98■■□□□ 1.59
SQLE-205ENST00000521232 NHSL1Q5SYE7 1610 aa24.97■■□□□ 1.59
SQLE-205ENST00000521232 SPATA31A6Q5VVP1 1343 aa24.97■■□□□ 1.59
SQLE-205ENST00000521232 STAC3Q96MF2 364 aa24.97■■□□□ 1.59
SQLE-205ENST00000521232 LAMC1P11047 1609 aa24.96■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms