RNA–Protein interactions for RNA: ENST00000520953.5

SREK1-209, Transcript of splicing regulatory glutamic acid and lysine rich protein 1, humanhuman

TSL 5

Gene SREK1, Length 2,172 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREK1-209ENST00000520953 UBR1Q8IWV7 1749 aa21.41■■□□□ 1.02
SREK1-209ENST00000520953 MYO3AQ8NEV4 1616 aa21.41■■□□□ 1.02
SREK1-209ENST00000520953 MYOM2P54296 1465 aa21.41■■□□□ 1.02
SREK1-209ENST00000520953 RALGAPBQ86X10 1494 aa21.41■■□□□ 1.02
SREK1-209ENST00000520953 KDM4FA0A1W2PPD8 638 aa21.41■■□□□ 1.02
SREK1-209ENST00000520953 NLRP1Q9C000 1473 aa21.39■■□□□ 1.01
SREK1-209ENST00000520953 RPGRIP1LQ68CZ1 1315 aa21.38■■□□□ 1.01
SREK1-209ENST00000520953 NRXN1Q9ULB1 1477 aa21.38■■□□□ 1.01
SREK1-209ENST00000520953 CFAP70Q5T0N1 1121 aa21.36■■□□□ 1.01
SREK1-209ENST00000520953 RIMS2Q9UQ26 1411 aa21.36■■□□□ 1.01
SREK1-209ENST00000520953 ROCK2O75116 1388 aaKnown RBP21.36■■□□□ 1.01
SREK1-209ENST00000520953 ZNF316A6NFI3 1004 aaPredicted RBP21.34■■□□□ 1.01
SREK1-209ENST00000520953 PIK3C2GO75747 1445 aa21.34■■□□□ 1.01
SREK1-209ENST00000520953 ZFYVE9O95405 1425 aa21.34■■□□□ 1.01
SREK1-209ENST00000520953 HSPA5P11021 654 aaKnown RBP21.33■■□□□ 1.01
SREK1-209ENST00000520953 CARD11Q9BXL7 1154 aa21.33■■□□□ 1.01
SREK1-209ENST00000520953 CEP170BQ9Y4F5 1589 aaPredicted RBP21.33■■□□□ 1
SREK1-209ENST00000520953 KDM5AP29375 1690 aaKnown RBP21.32■■□□□ 1
SREK1-209ENST00000520953 VGFO15240 615 aaPredicted RBP21.31■■□□□ 1
SREK1-209ENST00000520953 STAC3Q96MF2 364 aa21.31■■□□□ 1
SREK1-209ENST00000520953 TMEM2Q9UHN6 1383 aa21.31■■□□□ 1
SREK1-209ENST00000520953 GPRASP1Q5JY77 1395 aa21.29■■□□□ 1
SREK1-209ENST00000520953 USP47Q96K76 1375 aa21.29■■□□□ 1
SREK1-209ENST00000520953 LTKP29376 864 aa21.29■■□□□ 1
SREK1-209ENST00000520953 EIF4G2P78344 907 aaKnown RBP eCLIP21.28■■□□□ 1
SREK1-209ENST00000520953 SETD1BQ9UPS6 1966 aaKnown RBP21.28■■□□□ 1
SREK1-209ENST00000520953 TMEM132EQ6IEE7 984 aa21.27■■□□□ 1
SREK1-209ENST00000520953 C14orf93Q9H972 538 aaKnown RBP21.27■■□□□ 1
SREK1-209ENST00000520953 ZNF142P52746 1687 aaPredicted RBP21.26■□□□□ 0.99
SREK1-209ENST00000520953 KIAA1210Q9ULL0 1709 aa21.26■□□□□ 0.99
SREK1-209ENST00000520953 ARHGAP23Q9P227 1491 aa21.24■□□□□ 0.99
SREK1-209ENST00000520953 SLIT1O75093 1534 aa21.24■□□□□ 0.99
SREK1-209ENST00000520953 ASXL1Q8IXJ9 1541 aa21.24■□□□□ 0.99
SREK1-209ENST00000520953 ADGRB1O14514 1584 aa21.24■□□□□ 0.99
SREK1-209ENST00000520953 NRXN3Q9Y4C0 1643 aa21.24■□□□□ 0.99
SREK1-209ENST00000520953 TXNDC2Q86VQ3 553 aa21.23■□□□□ 0.99
SREK1-209ENST00000520953 THEMISQ8N1K5 641 aaPredicted RBP21.23■□□□□ 0.99
SREK1-209ENST00000520953 LAMC1P11047 1609 aa21.22■□□□□ 0.99
SREK1-209ENST00000520953 IQGAP1P46940 1657 aa21.22■□□□□ 0.99
SREK1-209ENST00000520953 ST20-MTHFSA0A0A6YYL1 179 aa21.21■□□□□ 0.99
SREK1-209ENST00000520953 ALKQ9UM73 1620 aa21.21■□□□□ 0.99
SREK1-209ENST00000520953 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.21■□□□□ 0.99
SREK1-209ENST00000520953 C11orf95C9JLR9 678 aaPredicted RBP21.2■□□□□ 0.98
SREK1-209ENST00000520953 DIEXFQ68CQ4 756 aaKnown RBP21.2■□□□□ 0.98
SREK1-209ENST00000520953 SETD1AO15047 1707 aaKnown RBP21.19■□□□□ 0.98
SREK1-209ENST00000520953 SETBP1Q9Y6X0 1596 aa21.18■□□□□ 0.98
SREK1-209ENST00000520953 BCANQ96GW7 911 aa21.17■□□□□ 0.98
SREK1-209ENST00000520953 SCAF11Q99590 1463 aaKnown RBP21.17■□□□□ 0.98
SREK1-209ENST00000520953 TRAK1Q9UPV9 953 aa21.16■□□□□ 0.98
SREK1-209ENST00000520953 EID1Q9Y6B2 187 aa21.16■□□□□ 0.98
SREK1-209ENST00000520953 ADAMTS13Q76LX8 1427 aa21.15■□□□□ 0.98
SREK1-209ENST00000520953 PLEKHG1Q9ULL1 1385 aa21.15■□□□□ 0.98
SREK1-209ENST00000520953 HDGFP51858 240 aaKnown RBP21.15■□□□□ 0.98
SREK1-209ENST00000520953 STK26Q9P289 416 aa21.15■□□□□ 0.98
SREK1-209ENST00000520953 METP08581 1390 aa21.15■□□□□ 0.98
SREK1-209ENST00000520953 SLC26A8Q96RN1 970 aa21.14■□□□□ 0.98
SREK1-209ENST00000520953 HSPA2P54652 639 aa21.13■□□□□ 0.97
SREK1-209ENST00000520953 WASHC2AQ641Q2 1341 aa21.13■□□□□ 0.97
SREK1-209ENST00000520953 TESK2Q96S53 571 aa21.12■□□□□ 0.97
SREK1-209ENST00000520953 YTHDC2Q9H6S0 1430 aaKnown RBP21.1■□□□□ 0.97
SREK1-209ENST00000520953 ANKLE2Q86XL3 938 aa21.1■□□□□ 0.97
SREK1-209ENST00000520953 NCKAP5LQ9HCH0 1330 aa21.1■□□□□ 0.97
SREK1-209ENST00000520953 MED14O60244 1454 aa21.08■□□□□ 0.97
SREK1-209ENST00000520953 LMTK3Q96Q04 1460 aa21.08■□□□□ 0.97
SREK1-209ENST00000520953 ARHGEF28Q8N1W1 1705 aaKnown RBP21.08■□□□□ 0.96
SREK1-209ENST00000520953 KIF7Q2M1P5 1343 aa21.07■□□□□ 0.96
SREK1-209ENST00000520953 DISP3Q9P2K9 1392 aa21.06■□□□□ 0.96
SREK1-209ENST00000520953 DDX10Q13206 875 aaKnown RBP21.06■□□□□ 0.96
SREK1-209ENST00000520953 SAFB2Q14151 953 aaKnown RBP eCLIP21.06■□□□□ 0.96
SREK1-209ENST00000520953 CCDC7Q96M83 1385 aa21.05■□□□□ 0.96
SREK1-209ENST00000520953 POLR3GLQ9BT43 218 aa21.05■□□□□ 0.96
SREK1-209ENST00000520953 PTPRUQ92729 1446 aa21.04■□□□□ 0.96
SREK1-209ENST00000520953 EIF3AQ14152 1382 aaKnown RBP21.04■□□□□ 0.96
SREK1-209ENST00000520953 POLR1AO95602 1720 aaPredicted RBP21.04■□□□□ 0.96
SREK1-209ENST00000520953 LRPPRCP42704 1394 aaKnown RBP21.03■□□□□ 0.96
SREK1-209ENST00000520953 CENPJQ9HC77 1338 aaPredicted RBP21.03■□□□□ 0.96
SREK1-209ENST00000520953 QRICH2Q9H0J4 1663 aa21.02■□□□□ 0.96
SREK1-209ENST00000520953 PLEKHH1Q9ULM0 1364 aa21.02■□□□□ 0.96
SREK1-209ENST00000520953 WAPLQ7Z5K2 1190 aa21.02■□□□□ 0.95
SREK1-209ENST00000520953 PRAM1Q96QH2 718 aa21.02■□□□□ 0.95
SREK1-209ENST00000520953 NPHP4O75161 1426 aaPredicted RBP21.01■□□□□ 0.95
SREK1-209ENST00000520953 TBX22Q9Y458 520 aa21■□□□□ 0.95
SREK1-209ENST00000520953 ABCC11Q96J66 1382 aa20.99■□□□□ 0.95
SREK1-209ENST00000520953 ROBO2Q9HCK4 1378 aa20.98■□□□□ 0.95
SREK1-209ENST00000520953 DIP2AQ14689 1571 aa20.97■□□□□ 0.95
SREK1-209ENST00000520953 TMF1P82094 1093 aa20.96■□□□□ 0.95
SREK1-209ENST00000520953 POGKQ9P215 609 aa20.96■□□□□ 0.95
SREK1-209ENST00000520953 AMOTL2Q9Y2J4 779 aa20.96■□□□□ 0.95
SREK1-209ENST00000520953 KNDC1Q76NI1 1749 aa20.95■□□□□ 0.94
SREK1-209ENST00000520953 DLC1Q96QB1 1528 aa20.95■□□□□ 0.94
SREK1-209ENST00000520953 MINK1Q8N4C8 1332 aaPredicted RBP20.95■□□□□ 0.94
SREK1-209ENST00000520953 TECPR2O15040 1411 aa20.95■□□□□ 0.94
SREK1-209ENST00000520953 STRCQ7RTU9 1775 aa20.94■□□□□ 0.94
SREK1-209ENST00000520953 CPS1P31327 1500 aa20.94■□□□□ 0.94
SREK1-209ENST00000520953 TULP4Q9NRJ4 1543 aa20.93■□□□□ 0.94
SREK1-209ENST00000520953 SBNO2Q9Y2G9 1366 aa20.92■□□□□ 0.94
SREK1-209ENST00000520953 KCNA6P17658 529 aa20.92■□□□□ 0.94
SREK1-209ENST00000520953 XRN1Q8IZH2 1706 aaKnown RBP20.92■□□□□ 0.94
SREK1-209ENST00000520953 CHD2O14647 1828 aaKnown RBP20.89■□□□□ 0.94
SREK1-209ENST00000520953 RBM33Q96EV2 1170 aaKnown RBP20.89■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms